Strain Fitness in Shewanella amazonensis SB2B around Sama_2981

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,549,588	+		Sama_2980	0.18	-0.0
3,549,588	+		Sama_2980	0.18	+0.0
3,549,712	+		Sama_2980	0.28	+1.3
3,549,713	-		Sama_2980	0.28	-0.6
3,549,713	-		Sama_2980	0.28	-0.6
3,549,713	-		Sama_2980	0.28	-1.0
3,549,713	-		Sama_2980	0.28	+0.4
3,549,713	-		Sama_2980	0.28	-0.2
3,549,753	+		Sama_2980	0.32	+1.8
3,549,753	+		Sama_2980	0.32	-0.3
3,549,753	+		Sama_2980	0.32	-2.3
3,549,754	-		Sama_2980	0.32	-0.7
3,549,754	-		Sama_2980	0.32	-1.9
3,549,754	-		Sama_2980	0.32	+0.6
3,549,754	-		Sama_2980	0.32	-0.9
3,549,754	-		Sama_2980	0.32	+1.6
3,549,820	+		Sama_2980	0.37	+0.7
3,549,820	+		Sama_2980	0.37	+0.6
3,549,820	+		Sama_2980	0.37	-3.0
3,549,821	-		Sama_2980	0.37	-1.8
3,549,821	-		Sama_2980	0.37	-0.0
3,549,821	-		Sama_2980	0.37	+0.1
3,549,861	-		Sama_2980	0.40	+0.1
3,549,869	+		Sama_2980	0.41	+0.4
3,549,926	+		Sama_2980	0.46	-2.2
3,549,927	-		Sama_2980	0.46	+0.1
3,549,927	-		Sama_2980	0.46	-1.4
3,549,927	-		Sama_2980	0.46	-0.2
3,549,957	+		Sama_2980	0.48	-0.6
3,549,983	+		Sama_2980	0.50	+0.3
3,549,983	+		Sama_2980	0.50	-0.8
3,549,984	-		Sama_2980	0.51	+1.4
3,549,984	-		Sama_2980	0.51	-0.3
3,549,988	-		Sama_2980	0.51	-0.6
3,549,988	-		Sama_2980	0.51	+0.2
3,549,988	-		Sama_2980	0.51	-0.4
3,550,025	+		Sama_2980	0.54	-2.1
3,550,025	+		Sama_2980	0.54	-0.3
3,550,026	-		Sama_2980	0.54	-1.6
3,550,224	-		Sama_2980	0.70	+1.9
3,550,235	+		Sama_2980	0.71	-0.5
3,550,236	-		Sama_2980	0.71	+0.1
3,550,238	+		Sama_2980	0.71	-2.0
3,550,238	+		Sama_2980	0.71	+0.6
3,550,308	-		Sama_2980	0.77	+0.1
3,550,326	+		Sama_2980	0.79	+1.2
3,550,326	+		Sama_2980	0.79	-1.2
3,550,326	+		Sama_2980	0.79	+1.3
3,550,326	+		Sama_2980	0.79	-0.9
3,550,351	+		Sama_2980	0.81	-0.5
3,550,380	+		Sama_2980	0.83	-0.6
3,550,380	+		Sama_2980	0.83	-0.8
3,550,380	+		Sama_2980	0.83	-1.9
3,550,380	+		Sama_2980	0.83	-1.0
3,550,381	-		Sama_2980	0.83	+0.7
3,550,381	-		Sama_2980	0.83	-1.3
3,550,382	+		Sama_2980	0.83	+0.8
3,550,382	+		Sama_2980	0.83	-0.2
3,550,382	+		Sama_2980	0.83	+0.0
3,550,382	+		Sama_2980	0.83	+0.1
3,550,382	+		Sama_2980	0.83	+0.2
3,550,382	+		Sama_2980	0.83	+0.2
3,550,383	-		Sama_2980	0.83	-2.4
3,550,383	-		Sama_2980	0.83	+1.2
3,550,383	-		Sama_2980	0.83	-1.4
3,550,383	-		Sama_2980	0.83	+0.5
3,550,383	-		Sama_2980	0.83	-1.3
3,550,383	-		Sama_2980	0.83	-0.7
3,550,541	+				+0.1
3,550,541	+				-1.3
3,550,541	+				-1.2
3,550,542	-				-0.7
3,550,542	-				-1.8
3,550,542	-				+0.0
3,550,542	-				+0.0
3,550,542	-				-0.4
3,550,542	-				-0.2
3,550,544	+				-2.2
3,550,544	+				-0.8
3,550,544	+				-0.6
3,550,544	+				-0.6
3,550,544	+				+1.4
3,550,544	+				-0.4
3,550,545	-				+0.2
3,550,545	-				-0.3
3,550,639	+				-0.3
3,550,643	+				-0.4
3,550,643	+				+1.2
3,550,643	+				-1.5
3,550,643	+				+0.7
3,550,728	+		Sama_2981	0.11	+0.1
3,550,729	-		Sama_2981	0.11	+0.0
3,550,760	+		Sama_2981	0.13	+0.3
3,550,764	-		Sama_2981	0.13	+0.3
3,550,764	-		Sama_2981	0.13	-1.0
3,550,843	+		Sama_2981	0.19	-1.5
3,550,844	-		Sama_2981	0.19	+0.0
3,550,844	-		Sama_2981	0.19	-1.0
3,550,878	-		Sama_2981	0.21	+0.9
3,550,878	-		Sama_2981	0.21	-1.0
3,551,004	-		Sama_2981	0.31	+0.1
3,551,043	+		Sama_2981	0.34	+0.0
3,551,044	-		Sama_2981	0.34	-0.3
3,551,117	+		Sama_2981	0.39	+0.3
3,551,117	+		Sama_2981	0.39	+0.8
3,551,117	+		Sama_2981	0.39	-1.2
3,551,117	+		Sama_2981	0.39	-1.0
3,551,118	-		Sama_2981	0.39	-1.6
3,551,118	-		Sama_2981	0.39	-0.1
3,551,118	-		Sama_2981	0.39	+0.4
3,551,206	+		Sama_2981	0.45	-0.9
3,551,211	+		Sama_2981	0.46	-0.3
3,551,211	+		Sama_2981	0.46	-0.9
3,551,211	+		Sama_2981	0.46	+0.8
3,551,211	+		Sama_2981	0.46	-1.3
3,551,211	+		Sama_2981	0.46	-0.4
3,551,211	+		Sama_2981	0.46	-0.3
3,551,211	+		Sama_2981	0.46	-0.7
3,551,211	+		Sama_2981	0.46	+0.5
3,551,211	+		Sama_2981	0.46	-0.2
3,551,211	+		Sama_2981	0.46	-1.6
3,551,211	+		Sama_2981	0.46	+1.0
3,551,211	+		Sama_2981	0.46	+0.5
3,551,212	-		Sama_2981	0.46	-0.5
3,551,212	-		Sama_2981	0.46	-1.0
3,551,212	-		Sama_2981	0.46	-1.3
3,551,212	-		Sama_2981	0.46	+0.1
3,551,212	-		Sama_2981	0.46	+0.8
3,551,212	-		Sama_2981	0.46	-0.1
3,551,212	-		Sama_2981	0.46	-2.8
3,551,212	-		Sama_2981	0.46	-0.7
3,551,212	-		Sama_2981	0.46	-0.2
3,551,212	-		Sama_2981	0.46	-0.1
3,551,212	-		Sama_2981	0.46	-0.6
3,551,212	-		Sama_2981	0.46	-1.2
3,551,348	+		Sama_2981	0.56	+0.6
3,551,390	+		Sama_2981	0.59	-0.1
3,551,390	+		Sama_2981	0.59	+0.2
3,551,390	+		Sama_2981	0.59	+0.4
3,551,391	-		Sama_2981	0.59	+0.3
3,551,391	-		Sama_2981	0.59	+0.0
3,551,391	-		Sama_2981	0.59	+1.4
3,551,391	-		Sama_2981	0.59	-0.5
3,551,391	-		Sama_2981	0.59	-0.1
3,551,391	-		Sama_2981	0.59	+0.3
3,551,435	+		Sama_2981	0.62	+1.0
3,551,435	+		Sama_2981	0.62	-0.7
3,551,435	+		Sama_2981	0.62	+0.2
3,551,435	+		Sama_2981	0.62	-0.9
3,551,436	-		Sama_2981	0.62	-1.6
3,551,436	-		Sama_2981	0.62	-0.9
3,551,438	+		Sama_2981	0.62	+1.1
3,551,438	+		Sama_2981	0.62	-0.2
3,551,439	-		Sama_2981	0.62	-0.9
3,551,439	-		Sama_2981	0.62	-0.8
3,551,480	+		Sama_2981	0.65	-1.0
3,551,697	-		Sama_2981	0.81	-0.6
3,551,813	+		Sama_2981	0.90	-1.9
3,551,813	+		Sama_2981	0.90	+0.3
3,551,813	+		Sama_2981	0.90	+0.4
3,551,814	-		Sama_2981	0.90	-1.9
3,551,814	-		Sama_2981	0.90	-2.2
3,551,824	+				-0.3
3,551,824	+				-0.8
3,551,824	+				-1.6
3,551,824	+				-0.4
3,551,825	-				-2.4
3,551,825	-				+1.3
3,551,825	-				-2.7
3,551,825	-				+2.3
3,551,825	-				-0.3
3,551,865	+				-1.7
3,551,865	+				-0.3
3,551,865	+				-0.8
3,551,866	-				+0.0
3,551,871	+				+0.4
3,551,871	+				-2.2
3,551,871	+				+0.8
3,551,871	+				+0.0
3,551,872	-				+0.8
3,551,872	-				+0.0
3,551,941	+				+0.3
3,551,976	+				+0.9
3,551,977	-				-0.2
3,551,977	-				-0.3
3,552,040	-				-0.6
3,552,040	-				+0.3
3,552,040	-				+0.3
3,552,044	-				+0.4
3,552,044	-				-1.8
3,552,053	-				+1.0
3,552,057	-				-1.5
3,552,147	+				-2.5
3,552,153	+				+0.3
3,552,177	+				-0.8
3,552,177	+				+0.9
3,552,181	+				+0.9
3,552,273	+				-0.2
3,552,274	-				+0.2
3,552,398	-				-0.2
3,552,398	-				+0.5
3,552,413	+				-1.3
3,552,413	+				+1.0
3,552,414	-				+0.0
3,552,415	+				-0.3
3,552,416	-				+1.4
3,552,416	-				+0.4
3,552,487	+				-0.0
3,552,488	-				+1.8
3,552,488	-				-0.9
3,552,488	-				+0.2
3,552,571	+				-1.3
3,552,572	-				-0.3
3,552,591	+				-0.3
3,552,592	-				+1.1
3,552,592	-				-0.7
3,552,592	-				+0.9
3,552,592	-				-1.4
3,552,592	-				+0.0
3,552,598	-				+0.4
3,552,598	-				+0.4
3,552,605	+				+0.5
3,552,605	+				-2.2
3,552,605	+				-1.2
3,552,721	+				-1.1
3,552,721	+				+0.8
3,552,721	+				-2.3
3,552,722	-				+0.8
3,552,722	-				+0.7
3,552,722	-				+0.4
3,552,726	-				+1.0
3,552,748	-				+0.6
3,552,748	-				+0.7
3,552,750	+				-1.9
3,552,750	+				-1.1
3,552,751	-				-0.9
3,552,751	-				-0.4
3,552,751	-				-2.4
3,552,751	-				+0.9
3,552,903	+				+0.8
3,552,903	+				-1.0
3,552,903	+				-0.6
3,552,915	-				-0.8