Strain Fitness in Shewanella amazonensis SB2B around Sama_1180

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
1,439,797	-		Sama_1178	0.35	+0.7
1,439,797	-		Sama_1178	0.35	-0.2
1,439,797	-		Sama_1178	0.35	+0.7
1,439,797	-		Sama_1178	0.35	-0.1
1,439,850	+		Sama_1178	0.43	+1.4
1,439,850	+		Sama_1178	0.43	+0.6
1,439,877	+		Sama_1178	0.47	-0.7
1,439,878	-		Sama_1178	0.47	-1.0
1,439,955	+		Sama_1178	0.57	-0.6
1,439,955	+		Sama_1178	0.57	-1.3
1,439,955	+		Sama_1178	0.57	-0.9
1,439,960	+		Sama_1178	0.58	-0.5
1,439,960	+		Sama_1178	0.58	-0.4
1,439,960	+		Sama_1178	0.58	+1.6
1,439,961	-		Sama_1178	0.58	-1.5
1,439,976	+		Sama_1178	0.60	+0.2
1,439,976	+		Sama_1178	0.60	+0.0
1,439,977	-		Sama_1178	0.61	-0.7
1,439,977	-		Sama_1178	0.61	+0.9
1,439,977	-		Sama_1178	0.61	-0.7
1,439,987	+		Sama_1178	0.62	-0.4
1,440,026	+		Sama_1178	0.67	+0.0
1,440,027	-		Sama_1178	0.68	-1.8
1,440,147	+		Sama_1178	0.84	-1.7
1,440,257	+				-0.7
1,440,257	+				-1.0
1,440,257	+				+0.2
1,440,257	+				+0.8
1,440,258	-				+0.5
1,440,258	-				-2.0
1,440,258	-				-0.2
1,440,258	-				-1.0
1,440,334	+		Sama_1179	0.26	-2.1
1,440,433	+		Sama_1179	0.68	-0.6
1,440,433	+		Sama_1179	0.68	-2.3
1,440,452	-		Sama_1179	0.77	+0.8
1,440,456	+		Sama_1179	0.78	-2.6
1,440,456	+		Sama_1179	0.78	-0.4
1,440,457	-		Sama_1179	0.79	+0.2
1,440,457	-		Sama_1179	0.79	-0.4
1,440,505	+				-1.0
1,440,505	+				-2.7
1,440,505	+				-0.1
1,440,505	+				-0.9
1,440,505	+				-1.3
1,440,505	+				-0.2
1,440,505	+				-1.2
1,440,506	-				-0.8
1,440,506	-				-0.9
1,440,506	-				-1.3
1,440,506	-				-1.1
1,440,506	-				-0.7
1,440,506	-				-0.3
1,440,506	-				-2.1
1,440,506	-				-0.2
1,440,522	+				-0.6
1,440,523	-				+0.1
1,440,523	-				-0.7
1,440,523	-				+0.7
1,440,523	-				+1.5
1,440,523	-				+1.7
1,440,544	+				-1.0
1,440,544	+				+1.4
1,440,545	-				+1.6
1,440,545	-				-2.3
1,440,561	+				-0.5
1,440,562	-				-0.7
1,440,574	+				-0.2
1,440,574	+				+0.2
1,440,575	-				+0.1
1,440,575	-				-0.8
1,440,575	-				-0.2
1,440,575	-				+0.0
1,440,581	+				-0.3
1,440,614	+				-0.2
1,440,614	+				+0.6
1,440,614	+				+2.1
1,440,615	-				-1.3
1,440,615	-				+1.3
1,440,644	-				-0.4
1,440,682	+				+1.2
1,440,723	+				-0.3
1,440,723	+				-0.8
1,440,724	-				-1.2
1,440,724	-				-0.5
1,440,757	+				+0.6
1,440,757	+				-1.2
1,440,757	+				+0.0
1,440,758	-				-0.9
1,440,768	+				-1.8
1,440,768	+				-1.0
1,440,768	+				-0.6
1,440,768	+				+1.0
1,440,769	-				-2.6
1,440,769	-				-0.7
1,440,778	-				-0.1
1,440,778	-				+0.3
1,440,895	-				+3.1
1,440,943	+				+1.1
1,440,943	+				-1.2
1,440,943	+				-0.9
1,440,943	+				-0.3
1,440,943	+				+1.5
1,440,944	-				+0.3
1,440,944	-				-0.8
1,440,967	+				+0.1
1,440,967	+				+0.3
1,440,968	-				-1.4
1,440,968	-				-1.2
1,440,968	-				+1.0
1,440,980	+				-1.0
1,440,980	+				-0.6
1,440,980	+				-1.4
1,441,011	+				-0.3
1,441,047	+				-1.0
1,441,246	+		Sama_1180	0.17	+0.4
1,441,247	-		Sama_1180	0.17	-1.2
1,441,256	+		Sama_1180	0.17	-0.4
1,441,257	-		Sama_1180	0.17	-0.9
1,441,257	-		Sama_1180	0.17	-1.3
1,441,257	-		Sama_1180	0.17	+0.8
1,441,324	+		Sama_1180	0.19	-3.6
1,441,324	+		Sama_1180	0.19	-0.2
1,441,324	+		Sama_1180	0.19	+0.4
1,441,376	-		Sama_1180	0.21	+0.8
1,441,418	-		Sama_1180	0.23	+1.8
1,441,442	+		Sama_1180	0.24	+0.7
1,441,442	+		Sama_1180	0.24	-0.7
1,441,442	+		Sama_1180	0.24	-0.5
1,441,443	-		Sama_1180	0.24	+0.7
1,441,443	-		Sama_1180	0.24	-1.1
1,441,443	-		Sama_1180	0.24	+0.4
1,441,443	-		Sama_1180	0.24	+0.7
1,441,443	-		Sama_1180	0.24	-0.4
1,441,443	-		Sama_1180	0.24	+1.3
1,441,443	-		Sama_1180	0.24	+1.7
1,441,443	-		Sama_1180	0.24	-3.1
1,441,443	-		Sama_1180	0.24	+0.8
1,441,443	-		Sama_1180	0.24	-1.9
1,441,443	-		Sama_1180	0.24	+1.2
1,441,444	+		Sama_1180	0.24	+0.1
1,441,444	+		Sama_1180	0.24	-1.2
1,441,444	+		Sama_1180	0.24	-0.1
1,441,444	+		Sama_1180	0.24	-0.2
1,441,444	+		Sama_1180	0.24	-0.8
1,441,549	+		Sama_1180	0.28	+0.1
1,441,549	+		Sama_1180	0.28	+1.3
1,441,549	+		Sama_1180	0.28	-2.9
1,441,637	+		Sama_1180	0.31	-0.6
1,441,637	+		Sama_1180	0.31	-1.3
1,441,637	+		Sama_1180	0.31	+1.5
1,441,637	+		Sama_1180	0.31	-0.9
1,441,637	+		Sama_1180	0.31	-0.3
1,441,637	+		Sama_1180	0.31	+0.9
1,441,637	+		Sama_1180	0.31	+0.9
1,441,638	-		Sama_1180	0.31	-0.5
1,441,638	-		Sama_1180	0.31	-1.5
1,441,638	-		Sama_1180	0.31	-1.9
1,441,638	-		Sama_1180	0.31	-1.7
1,441,638	-		Sama_1180	0.31	+0.5
1,441,738	+		Sama_1180	0.35	-0.2
1,441,738	+		Sama_1180	0.35	-0.2
1,441,772	-		Sama_1180	0.36	-0.8
1,441,796	+		Sama_1180	0.37	+0.1
1,441,796	+		Sama_1180	0.37	+0.6
1,441,796	+		Sama_1180	0.37	+0.6
1,441,796	+		Sama_1180	0.37	+0.0
1,441,797	-		Sama_1180	0.37	+0.3
1,441,807	-		Sama_1180	0.37	+0.9
1,441,807	-		Sama_1180	0.37	+0.3
1,441,807	-		Sama_1180	0.37	-1.6
1,441,807	-		Sama_1180	0.37	+0.3
1,441,843	-		Sama_1180	0.39	+0.9
1,441,891	-		Sama_1180	0.40	+1.3
1,441,918	+		Sama_1180	0.41	+0.3
1,441,919	-		Sama_1180	0.41	-1.2
1,441,958	-		Sama_1180	0.43	+0.3
1,441,958	-		Sama_1180	0.43	-0.8
1,441,958	-		Sama_1180	0.43	-0.1
1,441,981	+		Sama_1180	0.44	+0.5
1,441,982	-		Sama_1180	0.44	-0.8
1,441,991	+		Sama_1180	0.44	+2.2
1,441,991	+		Sama_1180	0.44	+1.1
1,441,991	+		Sama_1180	0.44	+0.8
1,441,991	+		Sama_1180	0.44	+1.0
1,441,992	-		Sama_1180	0.44	+1.6
1,441,992	-		Sama_1180	0.44	+0.3
1,441,992	-		Sama_1180	0.44	-2.2
1,441,992	-		Sama_1180	0.44	-1.9
1,441,992	-		Sama_1180	0.44	+1.1
1,441,992	-		Sama_1180	0.44	+0.7
1,441,992	-		Sama_1180	0.44	-0.2
1,441,992	-		Sama_1180	0.44	-0.0
1,442,000	+		Sama_1180	0.44	+1.5
1,442,001	-		Sama_1180	0.44	+0.2
1,442,001	-		Sama_1180	0.44	-0.1
1,442,001	-		Sama_1180	0.44	+2.5
1,442,035	+		Sama_1180	0.46	-0.2
1,442,036	-		Sama_1180	0.46	-0.5
1,442,036	-		Sama_1180	0.46	-0.4
1,442,036	-		Sama_1180	0.46	-0.4
1,442,036	-		Sama_1180	0.46	+1.6
1,442,059	+		Sama_1180	0.47	+0.9
1,442,059	+		Sama_1180	0.47	+0.4
1,442,060	-		Sama_1180	0.47	+0.2
1,442,060	-		Sama_1180	0.47	+0.4
1,442,060	-		Sama_1180	0.47	+0.7
1,442,099	-		Sama_1180	0.48	-0.8
1,442,114	+		Sama_1180	0.49	-0.3
1,442,117	+		Sama_1180	0.49	-0.4
1,442,117	+		Sama_1180	0.49	+0.4
1,442,117	+		Sama_1180	0.49	+0.8
1,442,118	-		Sama_1180	0.49	+0.6
1,442,206	+		Sama_1180	0.52	-0.6
1,442,206	+		Sama_1180	0.52	+0.2
1,442,228	-		Sama_1180	0.53	-1.7
1,442,253	+		Sama_1180	0.54	+0.6
1,442,253	+		Sama_1180	0.54	-0.3
1,442,254	-		Sama_1180	0.54	+0.8
1,442,254	-		Sama_1180	0.54	+0.0
1,442,254	-		Sama_1180	0.54	+0.6
1,442,264	+		Sama_1180	0.54	-0.5
1,442,265	-		Sama_1180	0.54	-1.2
1,442,265	-		Sama_1180	0.54	+0.6
1,442,272	+		Sama_1180	0.54	+0.0
1,442,272	+		Sama_1180	0.54	-0.6
1,442,273	-		Sama_1180	0.54	-0.3
1,442,273	-		Sama_1180	0.54	-1.2
1,442,273	-		Sama_1180	0.54	-0.1
1,442,273	-		Sama_1180	0.54	+0.1
1,442,322	+		Sama_1180	0.56	-1.3
1,442,323	-		Sama_1180	0.56	+0.5
1,442,395	+		Sama_1180	0.59	+0.2
1,442,395	+		Sama_1180	0.59	+0.0
1,442,396	-		Sama_1180	0.59	-0.2
1,442,396	-		Sama_1180	0.59	+1.4
1,442,396	-		Sama_1180	0.59	-1.9
1,442,396	-		Sama_1180	0.59	-0.8
1,442,396	-		Sama_1180	0.59	-2.0
1,442,396	-		Sama_1180	0.59	-0.4
1,442,434	+		Sama_1180	0.60	+0.2
1,442,449	+		Sama_1180	0.61	+0.1
1,442,450	-		Sama_1180	0.61	-1.2
1,442,450	-		Sama_1180	0.61	+1.1
1,442,481	+		Sama_1180	0.62	-0.0
1,442,482	-		Sama_1180	0.62	-0.2
1,442,515	+		Sama_1180	0.63	+0.2
1,442,598	+		Sama_1180	0.66	+0.8
1,442,599	-		Sama_1180	0.67	+0.0
1,442,621	+		Sama_1180	0.67	-0.1
1,442,621	+		Sama_1180	0.67	-0.9
1,442,621	+		Sama_1180	0.67	+1.0
1,442,621	+		Sama_1180	0.67	+0.1
1,442,621	+		Sama_1180	0.67	+2.8
1,442,621	+		Sama_1180	0.67	+0.3
1,442,621	+		Sama_1180	0.67	-1.3
1,442,621	+		Sama_1180	0.67	+0.7
1,442,622	-		Sama_1180	0.67	-1.1
1,442,624	+		Sama_1180	0.67	+0.1
1,442,624	+		Sama_1180	0.67	-0.8
1,442,624	+		Sama_1180	0.67	+1.3
1,442,624	+		Sama_1180	0.67	-0.3
1,442,624	+		Sama_1180	0.67	-2.7
1,442,624	+		Sama_1180	0.67	+0.6
1,442,625	-		Sama_1180	0.67	-0.9
1,442,627	+		Sama_1180	0.68	-2.0
1,442,628	-		Sama_1180	0.68	-0.7
1,442,628	-		Sama_1180	0.68	-0.1
1,442,673	+		Sama_1180	0.69	+0.6
1,442,673	+		Sama_1180	0.69	+2.0
1,442,674	-		Sama_1180	0.69	+1.5
1,442,791	+		Sama_1180	0.74	-0.5
1,442,791	+		Sama_1180	0.74	-0.8
1,442,792	-		Sama_1180	0.74	+0.8
1,442,797	+		Sama_1180	0.74	-1.6
1,442,797	+		Sama_1180	0.74	-0.1
1,442,797	+		Sama_1180	0.74	-1.3
1,442,798	-		Sama_1180	0.74	-0.5
1,442,798	-		Sama_1180	0.74	+1.5
1,442,821	+		Sama_1180	0.75	-2.2
1,442,823	+		Sama_1180	0.75	-0.1
1,442,823	+		Sama_1180	0.75	+0.3
1,442,823	+		Sama_1180	0.75	-0.5
1,442,823	+		Sama_1180	0.75	-1.9
1,442,823	+		Sama_1180	0.75	+1.3
1,442,823	+		Sama_1180	0.75	+0.8
1,442,823	+		Sama_1180	0.75	-1.8
1,442,824	-		Sama_1180	0.75	+1.7
1,442,824	-		Sama_1180	0.75	-0.2
1,442,824	-		Sama_1180	0.75	-2.2
1,442,824	-		Sama_1180	0.75	+1.3
1,442,824	-		Sama_1180	0.75	-1.6
1,442,843	+		Sama_1180	0.76	+0.3
1,442,843	+		Sama_1180	0.76	-0.2
1,442,843	+		Sama_1180	0.76	-3.8
1,442,844	-		Sama_1180	0.76	-2.7
1,442,882	+		Sama_1180	0.77	+1.3
1,442,925	+		Sama_1180	0.79	+0.3
1,442,925	+		Sama_1180	0.79	+1.0
1,442,945	+		Sama_1180	0.79	-2.9
1,442,953	+		Sama_1180	0.80	+0.9
1,442,962	+		Sama_1180	0.80	+0.7
1,442,975	-		Sama_1180	0.80	+1.7
1,443,059	+		Sama_1180	0.83	-2.0
1,443,105	+		Sama_1180	0.85	+0.4
1,443,110	-		Sama_1180	0.85	+1.2
1,443,110	-		Sama_1180	0.85	-0.1
1,443,110	-		Sama_1180	0.85	-1.8
1,443,224	+		Sama_1180	0.90	+0.3
1,443,224	+		Sama_1180	0.90	-0.7
1,443,224	+		Sama_1180	0.90	+0.1
1,443,225	-		Sama_1180	0.90	+0.2
1,443,225	-		Sama_1180	0.90	+1.2
1,443,232	+		Sama_1180	0.90	+1.3
1,443,232	+		Sama_1180	0.90	+0.4
1,443,232	+		Sama_1180	0.90	-0.4
1,443,232	+		Sama_1180	0.90	-0.3
1,443,232	+		Sama_1180	0.90	-0.6
1,443,233	-		Sama_1180	0.90	+1.6
1,443,265	+				-0.4
1,443,265	+				+0.8
1,443,265	+				-1.3
1,443,265	+				-2.6
1,443,265	+				-0.8
1,443,266	-				-0.3
1,443,266	-				-0.5
1,443,266	-				-1.6
1,443,266	-				+0.7
1,443,266	-				-0.2
1,443,269	+				+2.7
1,443,269	+				+0.6
1,443,269	+				-0.1
1,443,269	+				+1.8
1,443,270	-				+0.4
1,443,270	-				+1.2
1,443,270	-				-0.5
1,443,270	-				+2.9
1,443,273	+				+0.2
1,443,273	+				+0.9
1,443,274	-				+0.6
1,443,317	+				+1.4
1,443,317	+				+0.1
1,443,317	+				+0.1
1,443,318	-				+1.1
1,443,349	+				+0.1
1,443,349	+				-0.4
1,443,349	+				-0.0
1,443,353	+				-0.4
1,443,354	-				+0.8
1,443,354	-				-1.0
1,443,363	+				+1.2
1,443,364	-				+1.8
1,443,393	+				-1.0
1,443,415	+				+0.6
1,443,415	+				+2.0
1,443,415	+				-0.2
1,443,416	-				-1.1
1,443,434	+				-0.6
1,443,435	-				-1.4
1,443,503	+				+1.1
1,443,503	+				-1.6
1,443,529	+				+0.4
1,443,529	+				+0.5
1,443,529	+				-1.6
1,443,530	-				-0.5
1,443,531	+				+1.1
1,443,531	+				+1.9
1,443,532	-				-0.0
1,443,532	-				+0.3
1,443,532	-				+0.1
1,443,532	-				+0.0
1,443,532	-				+1.4
1,443,544	+				-0.5
1,443,544	+				-0.3
1,443,544	+				-0.7
1,443,544	+				-0.6
1,443,544	+				+0.8
1,443,544	+				-0.1
1,443,544	+				+0.0
1,443,544	+				-1.2
1,443,544	+				-0.7
1,443,544	+				+2.4
1,443,544	+				-0.3
1,443,544	+				-1.2
1,443,544	+				-0.3
1,443,544	+				-1.0
1,443,545	-				+0.4
1,443,545	-				+0.8
1,443,545	-				+1.0
1,443,545	-				-0.3
1,443,545	-				-2.9
1,443,545	-				-1.6
1,443,545	-				+0.2
1,443,548	+				+0.3
1,443,548	+				-0.1
1,443,548	+				-0.6
1,443,549	-				-2.2
1,443,549	-				+1.3
1,443,549	-				+0.1
1,443,596	+				+0.6
1,443,596	+				-1.0
1,443,597	-				+0.0
1,443,597	-				-1.2
1,443,597	-				+2.2
1,443,668	+				+0.8
1,443,669	-				-0.2
1,443,671	+				+0.7
1,443,671	+				-0.1
1,443,672	-				-0.3
1,443,741	+				-0.4
1,443,741	+				-0.3
1,443,741	+				+0.6
1,443,741	+				-0.6
1,443,742	-				-0.3
1,443,742	-				-0.6
1,443,742	-				-0.3
1,443,742	-				-2.5
1,443,742	-				-1.4
1,443,742	-				+0.9
1,443,759	+				-0.3
1,443,759	+				-1.4
1,443,759	+				-1.2
1,443,759	+				+2.1
1,443,759	+				+1.8
1,443,759	+				+0.1
1,443,759	+				+0.8
1,443,759	+				+0.4
1,443,759	+				+1.6
1,443,760	-				+1.2
1,443,760	-				+0.2
1,443,760	-				-2.9
1,443,760	-				+0.4
1,443,760	-				+0.3
1,443,760	-				+1.0
1,443,760	-				-1.9
1,443,760	-				+0.5
1,443,760	-				-1.7
1,443,760	-				-1.3
1,443,761	+				-3.7
1,443,761	+				-0.8
1,443,761	+				+1.0
1,443,761	+				+0.7
1,443,761	+				+0.3
1,443,761	+				+0.4
1,443,761	+				+0.9
1,443,762	-				-0.3
1,443,762	-				+0.1
1,443,762	-				+1.2
1,443,762	-				+0.1
1,443,762	-				+0.3
1,443,762	-				+1.3
1,443,762	-				-0.0
1,443,762	-				+1.2
1,443,765	-				+2.0
1,443,765	-				-0.5
1,443,978	+		Sama_1181	0.14	-0.6
1,444,016	-		Sama_1181	0.17	-2.3
1,444,067	-		Sama_1181	0.21	-0.1
1,444,095	+		Sama_1181	0.23	+0.4
1,444,101	+		Sama_1181	0.23	-0.4
1,444,101	+		Sama_1181	0.23	-0.2
1,444,102	-		Sama_1181	0.23	+0.2
1,444,102	-		Sama_1181	0.23	+1.3
1,444,146	+		Sama_1181	0.26	-1.6
1,444,147	-		Sama_1181	0.27	-2.1
1,444,245	+		Sama_1181	0.34	-1.5
1,444,245	+		Sama_1181	0.34	-1.2
1,444,245	+		Sama_1181	0.34	+0.6
1,444,245	+		Sama_1181	0.34	-0.9
1,444,246	-		Sama_1181	0.34	+0.7
1,444,286	+		Sama_1181	0.37	-0.9
1,444,292	+		Sama_1181	0.38	+0.5
1,444,292	+		Sama_1181	0.38	-1.0
1,444,292	+		Sama_1181	0.38	-1.7
1,444,293	-		Sama_1181	0.38	-1.7
1,444,473	+		Sama_1181	0.51	+1.2
1,444,473	+		Sama_1181	0.51	-1.3