Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3699

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
103,873	+				+0.4
103,905	+				+0.1
103,905	+				-1.3
103,932	-				+0.9
103,941	-				-1.5
103,992	+				-0.0
103,996	-				-1.8
104,003	+				+0.3
104,242	-		Dshi_3699	0.15	+0.0
104,252	-		Dshi_3699	0.15	+3.8
104,260	-		Dshi_3699	0.16	-0.3
104,309	+		Dshi_3699	0.18	-0.6
104,309	+		Dshi_3699	0.18	-0.2
104,314	+		Dshi_3699	0.18	-1.2
104,391	-		Dshi_3699	0.21	+2.0
104,402	+		Dshi_3699	0.21	+0.3
104,415	-		Dshi_3699	0.22	+1.3
104,469	-		Dshi_3699	0.24	+1.1
104,545	-		Dshi_3699	0.27	-0.3
104,550	-		Dshi_3699	0.27	+0.2
104,555	+		Dshi_3699	0.28	+0.1
104,555	+		Dshi_3699	0.28	-0.0
104,563	-		Dshi_3699	0.28	-2.4
104,572	-		Dshi_3699	0.28	+0.5
104,572	-		Dshi_3699	0.28	+0.1
104,600	+		Dshi_3699	0.29	+0.8
104,600	+		Dshi_3699	0.29	-0.3
104,600	+		Dshi_3699	0.29	-1.8
104,627	+		Dshi_3699	0.30	+0.4
104,635	-		Dshi_3699	0.31	-0.8
104,635	-		Dshi_3699	0.31	+0.2
104,656	+		Dshi_3699	0.32	+1.0
104,659	-		Dshi_3699	0.32	-1.8
104,708	-		Dshi_3699	0.34	+1.6
104,712	-		Dshi_3699	0.34	-0.0
104,738	+		Dshi_3699	0.35	-0.0
104,746	-		Dshi_3699	0.35	+0.6
104,871	+		Dshi_3699	0.40	+0.3
104,890	+		Dshi_3699	0.41	+1.4
104,898	-		Dshi_3699	0.41	-0.9
104,905	+		Dshi_3699	0.41	+1.3
104,952	+		Dshi_3699	0.43	+0.3
104,984	+		Dshi_3699	0.45	-0.1
104,993	+		Dshi_3699	0.45	-0.4
104,994	+		Dshi_3699	0.45	-0.7
104,998	+		Dshi_3699	0.45	-1.3
105,033	+		Dshi_3699	0.47	-0.4
105,040	+		Dshi_3699	0.47	-0.5
105,103	+		Dshi_3699	0.49	-0.1
105,126	+		Dshi_3699	0.50	-0.4
105,134	-		Dshi_3699	0.51	+0.3
105,196	+		Dshi_3699	0.53	+0.7
105,200	+		Dshi_3699	0.53	-1.1
105,265	-		Dshi_3699	0.56	+0.7
105,293	-		Dshi_3699	0.57	+1.2
105,317	+		Dshi_3699	0.58	-0.2
105,325	-		Dshi_3699	0.58	+0.1
105,325	-		Dshi_3699	0.58	+0.9
105,359	+		Dshi_3699	0.60	-0.8
105,369	+		Dshi_3699	0.60	-0.3
105,369	+		Dshi_3699	0.60	-0.8
105,369	+		Dshi_3699	0.60	-0.1
105,375	+		Dshi_3699	0.60	+1.2
105,423	-		Dshi_3699	0.62	-0.2
105,423	-		Dshi_3699	0.62	+0.2
105,517	+		Dshi_3699	0.66	+0.2
105,560	-		Dshi_3699	0.68	+0.5
105,567	-		Dshi_3699	0.68	-0.6
105,590	-		Dshi_3699	0.69	+0.2
105,693	+		Dshi_3699	0.73	+0.1
105,780	-		Dshi_3699	0.76	+1.0
105,844	+		Dshi_3699	0.79	-0.9
105,859	-		Dshi_3699	0.79	-0.3
105,865	+		Dshi_3699	0.80	-1.2
105,940	+		Dshi_3699	0.83	-0.2
106,026	-		Dshi_3699	0.86	+0.1
106,159	+				+0.9
106,167	-				+0.2
106,169	+				-0.8
106,186	+				-1.4
106,186	+				-0.5
106,186	+				-0.3
106,193	-				-1.0
106,194	-				-0.5
106,194	-				-0.5
106,255	+				+0.9
106,260	+				+1.0
106,260	+				-0.1
106,260	+				-2.2
106,260	+				-2.3
106,265	+				-0.5
106,265	+				+1.0
106,270	+				+0.4
106,270	+				-0.9
106,275	+				-1.2
106,277	+				-0.1
106,295	+				-1.5
106,311	+				+0.5
106,316	+				-0.8
106,316	+				-0.5
106,316	+				+0.3
106,316	+				+0.8
106,316	+				-1.9
106,318	+				-1.4
106,318	+				-1.0
106,319	+				-0.1
106,323	+				-0.5
106,324	-				+0.2
106,326	-				-0.8
106,326	-				-1.0
106,326	-				+0.2
106,326	-				+0.7
106,326	-				-0.5
106,326	-				-0.9
106,343	+				+0.9
106,343	+				-0.4
106,343	+				+0.9
106,343	+				-0.2
106,343	+				-1.6
106,343	+				-1.4
106,343	+				+0.5
106,343	+				+0.8
106,348	+				+0.4
106,348	+				+1.1
106,351	-				-1.0
106,351	-				+0.9
106,351	-				-0.3
106,351	-				+0.8
106,351	-				-0.3
106,351	-				-3.5
106,351	-				+0.5
106,351	-				+0.1
106,351	-				+0.5
106,351	-				-1.1
106,353	+				+0.8
106,353	+				+0.2
106,353	+				+0.3
106,353	+				-1.5
106,355	+				+0.6
106,356	-				-0.7
106,361	-				+0.3
106,361	-				+0.1
106,361	-				-0.8
106,361	-				+0.5
106,363	-				+0.2
106,363	-				-0.0
106,365	+				+0.5
106,365	+				+0.3
106,373	-				+1.4
106,396	-				+0.0
106,445	+				+0.0
106,453	-				-0.8
106,460	-				+0.4
106,462	+				-1.0
106,462	+				-0.3
106,463	-				-0.6
106,465	-				-0.6
106,474	+				-0.8
106,482	+				+0.2
106,489	+				+0.6
106,490	+				+1.1
106,490	+				-1.4
106,490	+				+0.5
106,490	+				-0.7
106,490	-				+2.8
106,497	+				+2.4
106,498	-				-0.7
106,498	-				+1.2
106,532	-				-0.4
106,887	+				-0.3
106,887	+				-2.4
106,887	+				-1.4
106,887	+				-0.5
106,887	+				-0.7
106,887	+				-2.0
106,887	+				+0.0
106,887	+				-0.3
106,897	+				-0.9
106,897	+				+0.1
106,897	+				-0.9
106,926	+				+0.7
106,966	+				+1.3
106,973	+				+0.8
106,973	+				-0.2
106,973	+				+0.6
106,973	+				-0.9
106,974	-				-0.3
106,974	-				+0.2
106,978	+				-0.2
106,978	+				+0.3
106,981	-				+0.7
106,981	-				+0.4
106,981	-				-0.3
106,994	-				-2.0
106,995	+				-0.0
106,995	+				-0.6
107,003	-				+0.9
107,003	-				+0.4
107,003	-				+0.3
107,003	-				+1.5
107,003	-				-0.2
107,029	+				-1.0
107,029	+				-0.4
107,029	+				-0.8
107,029	+				+0.4
107,030	+				+0.4
107,037	-				+0.6
107,048	+				-0.1
107,062	+				-0.7
107,063	+				+0.1
107,063	+				+0.8
107,064	-				+0.6
107,067	+				-0.4
107,067	+				-0.3
107,067	+				-0.1
107,067	+				-3.1
107,070	-				+2.6
107,075	-				+0.2
107,075	-				-0.0
107,076	-				+0.8
107,078	+				+0.1
107,099	+				-1.9
107,106	+				-1.9
107,123	+				+0.0
107,124	-				-1.2
107,143	+				+0.6
107,143	+				+0.7
107,143	+				+0.4
107,144	+				-1.1
107,151	-				-0.3
107,160	+				-1.2
107,183	+				-0.4
107,183	+				+1.5
107,183	+				+0.0
107,183	+				-0.5
107,183	+				+0.4
107,183	+				-1.8
107,191	+				+0.5
107,191	-				-0.0
107,191	-				+0.1
107,201	-				-0.8
107,205	+				-0.2
107,205	+				-0.4
107,210	+				-1.4
107,210	+				+0.8
107,210	+				-1.1
107,210	+				-0.0
107,210	+				-1.5
107,210	+				-0.6
107,210	+				+0.1
107,210	+				+0.2
107,218	-				+0.9
107,218	-				-1.4
107,218	-				+0.8
107,218	-				+0.8
107,218	-				-0.3
107,218	-				-0.0
107,252	+				-0.8
107,272	+				-1.8
107,272	+				+0.2
107,287	-		Dshi_3700	0.10	-3.4
107,296	+		Dshi_3700	0.11	+0.4
107,333	+		Dshi_3700	0.15	-0.4
107,360	+		Dshi_3700	0.18	-0.2
107,367	+		Dshi_3700	0.19	-1.5
107,368	-		Dshi_3700	0.19	-0.8
107,368	-		Dshi_3700	0.19	+0.2