Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0940 and SO0941 overlap by 8 nucleotides SO0941 and SO0942 are separated by 84 nucleotides SO0942 and SO0943 overlap by 20 nucleotides
SO0940: SO0940 - transcriptional regulator-related protein (NCBI ptt file), at 971,225 to 971,968
SO0940
SO0941: SO0941 - hypothetical protein (NCBI ptt file), at 971,961 to 972,491
SO0941
SO0942: SO0942 - conserved hypothetical protein (NCBI ptt file), at 972,576 to 973,976
SO0942
SO0943: SO0943 - sensory box protein, putative (NCBI ptt file), at 973,957 to 976,194
SO0943
Position (kb) 972
973
974 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 971.576 kb on - strand, within SO0940 at 971.682 kb on + strand, within SO0940 at 971.700 kb on - strand, within SO0940 at 971.728 kb on + strand, within SO0940 at 971.760 kb on + strand, within SO0940 at 971.760 kb on + strand, within SO0940 at 971.768 kb on - strand, within SO0940 at 971.768 kb on - strand, within SO0940 at 971.772 kb on + strand, within SO0940 at 971.772 kb on + strand, within SO0940 at 971.779 kb on - strand, within SO0940 at 971.780 kb on - strand, within SO0940 at 971.940 kb on + strand at 971.942 kb on + strand at 971.951 kb on + strand at 972.176 kb on - strand, within SO0941 at 972.266 kb on - strand, within SO0941 at 972.324 kb on - strand, within SO0941 at 972.365 kb on - strand, within SO0941 at 972.388 kb on + strand, within SO0941 at 972.419 kb on + strand, within SO0941 at 972.424 kb on + strand, within SO0941 at 972.427 kb on - strand, within SO0941 at 972.706 kb on + strand at 972.730 kb on - strand, within SO0942 at 972.768 kb on + strand, within SO0942 at 972.768 kb on + strand, within SO0942 at 972.829 kb on + strand, within SO0942 at 972.829 kb on + strand, within SO0942 at 972.931 kb on - strand, within SO0942 at 973.067 kb on + strand, within SO0942 at 973.074 kb on + strand, within SO0942 at 973.074 kb on + strand, within SO0942 at 973.074 kb on + strand, within SO0942 at 973.147 kb on + strand, within SO0942 at 973.398 kb on + strand, within SO0942 at 973.398 kb on + strand, within SO0942 at 973.398 kb on + strand, within SO0942 at 973.406 kb on - strand, within SO0942 at 973.542 kb on + strand, within SO0942 at 973.672 kb on + strand, within SO0942 at 973.747 kb on + strand, within SO0942 at 973.747 kb on + strand, within SO0942 at 973.747 kb on + strand, within SO0942 at 973.747 kb on + strand, within SO0942 at 973.755 kb on - strand, within SO0942 at 973.863 kb on + strand at 973.964 kb on - strand at 973.969 kb on - strand at 974.033 kb on + strand at 974.049 kb on + strand at 974.057 kb on - strand at 974.057 kb on - strand at 974.057 kb on - strand at 974.057 kb on - strand at 974.057 kb on - strand at 974.057 kb on - strand at 974.095 kb on + strand at 974.103 kb on - strand at 974.142 kb on - strand at 974.223 kb on + strand, within SO0943 at 974.231 kb on - strand, within SO0943 at 974.480 kb on + strand, within SO0943 at 974.577 kb on + strand, within SO0943 at 974.678 kb on + strand, within SO0943 at 974.686 kb on - strand, within SO0943 at 974.894 kb on + strand, within SO0943 at 974.902 kb on - strand, within SO0943
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 971,576 - SO0940 0.47 -0.0 971,682 + SO0940 0.61 -0.8 971,700 - SO0940 0.64 -0.3 971,728 + SO0940 0.68 -0.9 971,760 + SO0940 0.72 +0.6 971,760 + SO0940 0.72 +0.6 971,768 - SO0940 0.73 -0.4 971,768 - SO0940 0.73 +2.0 971,772 + SO0940 0.74 -0.2 971,772 + SO0940 0.74 -0.1 971,779 - SO0940 0.74 +0.4 971,780 - SO0940 0.75 -0.7 971,940 + +0.9 971,942 + +0.2 971,951 + -1.1 972,176 - SO0941 0.40 -0.8 972,266 - SO0941 0.57 -0.5 972,324 - SO0941 0.68 +0.4 972,365 - SO0941 0.76 +0.2 972,388 + SO0941 0.80 -0.8 972,419 + SO0941 0.86 +0.2 972,424 + SO0941 0.87 -0.1 972,427 - SO0941 0.88 -1.1 972,706 + -4.5 972,730 - SO0942 0.11 -5.2 972,768 + SO0942 0.14 -4.4 972,768 + SO0942 0.14 -5.3 972,829 + SO0942 0.18 -3.0 972,829 + SO0942 0.18 -1.7 972,931 - SO0942 0.25 -3.2 973,067 + SO0942 0.35 -4.5 973,074 + SO0942 0.36 -4.1 973,074 + SO0942 0.36 -2.3 973,074 + SO0942 0.36 -3.8 973,147 + SO0942 0.41 -2.9 973,398 + SO0942 0.59 -5.0 973,398 + SO0942 0.59 -3.3 973,398 + SO0942 0.59 -2.4 973,406 - SO0942 0.59 -4.9 973,542 + SO0942 0.69 -4.4 973,672 + SO0942 0.78 -3.5 973,747 + SO0942 0.84 -3.7 973,747 + SO0942 0.84 -4.2 973,747 + SO0942 0.84 -3.9 973,747 + SO0942 0.84 -4.2 973,755 - SO0942 0.84 -4.5 973,863 + -3.2 973,964 - -1.0 973,969 - -2.0 974,033 + +0.6 974,049 + +0.0 974,057 - +0.5 974,057 - +1.1 974,057 - +0.4 974,057 - -0.4 974,057 - -0.6 974,057 - +0.8 974,095 + +0.1 974,103 - +0.2 974,142 - +0.3 974,223 + SO0943 0.12 +0.4 974,231 - SO0943 0.12 +0.7 974,480 + SO0943 0.23 +0.4 974,577 + SO0943 0.28 +0.8 974,678 + SO0943 0.32 +2.2 974,686 - SO0943 0.33 +0.6 974,894 + SO0943 0.42 +0.4 974,902 - SO0943 0.42 -0.0
Or see this region's nucleotide sequence