Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23300

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
2,418,218	+				+0.4
2,418,238	+				-2.1
2,418,243	+				+1.3
2,418,263	+				+1.5
2,418,268	-				-0.2
2,418,323	+		PGA1_c23290	0.16	-0.4
2,418,331	-		PGA1_c23290	0.17	+1.0
2,418,331	-		PGA1_c23290	0.17	+0.6
2,418,331	-		PGA1_c23290	0.17	+1.7
2,418,372	-		PGA1_c23290	0.22	-1.5
2,418,395	+		PGA1_c23290	0.24	+0.6
2,418,413	+		PGA1_c23290	0.26	+2.2
2,418,413	+		PGA1_c23290	0.26	+2.1
2,418,420	-		PGA1_c23290	0.27	+1.3
2,418,437	-		PGA1_c23290	0.29	-0.8
2,418,456	+		PGA1_c23290	0.31	-2.4
2,418,571	+		PGA1_c23290	0.44	-2.5
2,418,758	-		PGA1_c23290	0.65	-1.0
2,418,758	-		PGA1_c23290	0.65	-0.1
2,418,758	-		PGA1_c23290	0.65	+3.0
2,418,758	-		PGA1_c23290	0.65	-0.4
2,418,758	-		PGA1_c23290	0.65	+1.3
2,418,758	-		PGA1_c23290	0.65	+2.4
2,418,770	+		PGA1_c23290	0.67	+1.6
2,418,778	-		PGA1_c23290	0.68	-2.4
2,418,802	+		PGA1_c23290	0.70	+1.5
2,418,861	-		PGA1_c23290	0.77	+0.3
2,418,884	+		PGA1_c23290	0.80	+0.2
2,418,884	+		PGA1_c23290	0.80	-0.4
2,418,892	-		PGA1_c23290	0.80	-2.4
2,418,892	-		PGA1_c23290	0.80	-1.5
2,418,892	-		PGA1_c23290	0.80	-0.1
2,418,892	-		PGA1_c23290	0.80	+0.1
2,418,917	+		PGA1_c23290	0.83	-0.6
2,419,037	+				-1.6
2,419,064	+				-0.3
2,419,064	+				+0.7
2,419,067	-				+0.0
2,419,073	+				-1.1
2,419,073	+				+1.9
2,419,083	+				+0.3
2,419,130	+				-0.5
2,419,138	-				-2.0
2,419,139	+				-0.9
2,419,147	-				-1.8
2,419,172	-				-3.7
2,419,180	-				+0.6
2,419,210	+				+0.7
2,419,234	+				+0.4
2,419,239	+				+0.6
2,419,256	+				-0.1
2,419,285	+				-1.6
2,419,351	+		PGA1_c23300	0.11	-1.8
2,419,361	+		PGA1_c23300	0.12	-2.8
2,419,384	-		PGA1_c23300	0.13	+1.3
2,419,391	-		PGA1_c23300	0.13	+2.2
2,419,400	+		PGA1_c23300	0.13	+0.3
2,419,403	-		PGA1_c23300	0.14	+0.4
2,419,410	+		PGA1_c23300	0.14	-3.7
2,419,410	-		PGA1_c23300	0.14	-1.0
2,419,412	+		PGA1_c23300	0.14	-0.6
2,419,420	-		PGA1_c23300	0.14	+0.8
2,419,432	-		PGA1_c23300	0.15	-0.3
2,419,439	+		PGA1_c23300	0.15	+2.3
2,419,447	-		PGA1_c23300	0.15	-2.3
2,419,450	+		PGA1_c23300	0.15	-0.2
2,419,458	-		PGA1_c23300	0.16	+0.7
2,419,521	+		PGA1_c23300	0.18	+2.3
2,419,529	-		PGA1_c23300	0.19	+3.5
2,419,551	+		PGA1_c23300	0.20	-0.9
2,419,559	-		PGA1_c23300	0.20	-0.9
2,419,629	+		PGA1_c23300	0.23	+1.0
2,419,632	-		PGA1_c23300	0.23	+0.3
2,419,637	-		PGA1_c23300	0.23	-2.1
2,419,690	+		PGA1_c23300	0.25	+0.3
2,419,690	+		PGA1_c23300	0.25	+0.6
2,419,690	+		PGA1_c23300	0.25	-2.5
2,419,701	-		PGA1_c23300	0.26	+0.3
2,419,783	+		PGA1_c23300	0.29	+0.7
2,419,814	+		PGA1_c23300	0.30	-0.4
2,419,822	-		PGA1_c23300	0.31	-1.7
2,419,876	-		PGA1_c23300	0.33	-1.2
2,419,908	+		PGA1_c23300	0.34	+0.0
2,419,917	-		PGA1_c23300	0.35	+0.8
2,419,962	+		PGA1_c23300	0.36	-1.6
2,419,994	-		PGA1_c23300	0.38	-0.5
2,420,048	-		PGA1_c23300	0.40	-0.6
2,420,147	+		PGA1_c23300	0.44	+0.6
2,420,154	-		PGA1_c23300	0.44	-2.8
2,420,198	+		PGA1_c23300	0.46	-1.8
2,420,211	-		PGA1_c23300	0.47	-1.0
2,420,261	+		PGA1_c23300	0.49	-1.8
2,420,263	+		PGA1_c23300	0.49	-2.6
2,420,263	+		PGA1_c23300	0.49	-0.9
2,420,288	-		PGA1_c23300	0.50	+0.5
2,420,288	-		PGA1_c23300	0.50	-0.3
2,420,440	+		PGA1_c23300	0.56	-1.8
2,420,516	+		PGA1_c23300	0.59	+0.5
2,420,516	+		PGA1_c23300	0.59	-0.3
2,420,525	+		PGA1_c23300	0.59	-0.3
2,420,525	+		PGA1_c23300	0.59	+0.9
2,420,572	-		PGA1_c23300	0.61	-0.8
2,420,613	-		PGA1_c23300	0.63	-2.6
2,420,615	+		PGA1_c23300	0.63	+1.6
2,420,618	-		PGA1_c23300	0.63	-1.7
2,420,677	-		PGA1_c23300	0.66	-1.0
2,420,776	-		PGA1_c23300	0.70	+0.7
2,420,784	-		PGA1_c23300	0.70	-2.0
2,420,808	+		PGA1_c23300	0.71	-0.6
2,420,816	-		PGA1_c23300	0.71	+1.8
2,420,816	-		PGA1_c23300	0.71	+1.0
2,420,826	-		PGA1_c23300	0.72	+0.1
2,420,834	+		PGA1_c23300	0.72	-2.8
2,420,938	+		PGA1_c23300	0.76	+1.5
2,420,975	+		PGA1_c23300	0.78	+0.9
2,420,985	+		PGA1_c23300	0.78	-1.5
2,421,022	+		PGA1_c23300	0.80	+0.8
2,421,024	+		PGA1_c23300	0.80	-1.3
2,421,025	-		PGA1_c23300	0.80	+2.1
2,421,032	+		PGA1_c23300	0.80	-0.7
2,421,040	-		PGA1_c23300	0.80	+0.2
2,421,042	+		PGA1_c23300	0.80	-2.9
2,421,154	+		PGA1_c23300	0.85	+1.6
2,421,162	-		PGA1_c23300	0.85	+1.5
2,421,191	+		PGA1_c23300	0.87	+0.6
2,421,191	+		PGA1_c23300	0.87	-1.8
2,421,217	-		PGA1_c23300	0.88	-3.6
2,421,219	-		PGA1_c23300	0.88	-2.1
2,421,285	-				-0.5
2,421,285	-				+1.2
2,421,345	+				+0.3
2,421,353	+				-1.0
2,421,397	-				+0.4
2,421,469	+				+0.0
2,421,475	-				+1.9
2,421,496	+				-0.3
2,421,504	-				+0.2
2,421,506	+				-0.7
2,421,532	-				-2.1
2,421,560	+				+2.2
2,421,560	+				+1.0
2,421,560	+				-1.8
2,421,568	-				+1.3
2,421,568	-				+1.7
2,421,592	-				+0.6
2,421,592	-				+1.1
2,421,630	+				-0.2
2,421,630	+				+1.8
2,421,638	+				-1.7
2,421,638	-				-1.0
2,421,638	-				-2.3
2,421,683	+		PGA1_c23310	0.13	-2.5
2,421,691	-		PGA1_c23310	0.13	+1.1
2,421,716	-		PGA1_c23310	0.16	+0.2
2,421,778	-		PGA1_c23310	0.22	-1.7
2,421,783	-		PGA1_c23310	0.22	-3.1
2,421,807	-		PGA1_c23310	0.24	-0.2
2,421,832	+		PGA1_c23310	0.27	+0.4
2,421,850	-		PGA1_c23310	0.29	+0.5
2,421,886	-		PGA1_c23310	0.32	-1.7
2,421,904	-		PGA1_c23310	0.34	-1.8
2,421,909	-		PGA1_c23310	0.34	-2.1
2,421,909	-		PGA1_c23310	0.34	-0.8
2,421,934	-		PGA1_c23310	0.37	-1.1
2,422,016	+		PGA1_c23310	0.44	-1.8
2,422,026	+		PGA1_c23310	0.45	-3.6
2,422,034	-		PGA1_c23310	0.46	+2.2
2,422,034	-		PGA1_c23310	0.46	-2.4
2,422,034	-		PGA1_c23310	0.46	+0.6
2,422,054	-		PGA1_c23310	0.48	+2.7
2,422,054	-		PGA1_c23310	0.48	+0.5
2,422,055	+		PGA1_c23310	0.48	-1.0
2,422,060	+		PGA1_c23310	0.49	+0.6
2,422,060	+		PGA1_c23310	0.49	+0.4
2,422,060	+		PGA1_c23310	0.49	+1.3
2,422,068	-		PGA1_c23310	0.49	+0.3
2,422,068	-		PGA1_c23310	0.49	-1.8
2,422,068	-		PGA1_c23310	0.49	-2.6
2,422,138	-		PGA1_c23310	0.56	-0.3
2,422,177	+		PGA1_c23310	0.60	-0.3
2,422,177	+		PGA1_c23310	0.60	-1.6
2,422,183	+		PGA1_c23310	0.60	+2.8
2,422,185	-		PGA1_c23310	0.60	-0.7
2,422,185	-		PGA1_c23310	0.60	+0.7
2,422,207	-		PGA1_c23310	0.63	+0.2
2,422,256	+		PGA1_c23310	0.67	+0.0
2,422,264	-		PGA1_c23310	0.68	-0.6
2,422,266	+		PGA1_c23310	0.68	-0.3
2,422,295	-		PGA1_c23310	0.71	-0.5
2,422,327	-		PGA1_c23310	0.74	-0.6
2,422,403	-		PGA1_c23310	0.81	+1.8