Strain Fitness in Marinobacter adhaerens HP15 around HP15_2097

Experiment: m.b. syringaldehyde 0.3125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2095 and HP15_2096 are separated by 11 nucleotidesHP15_2096 and HP15_2097 are separated by 95 nucleotidesHP15_2097 and HP15_2098 are separated by 49 nucleotides HP15_2095: HP15_2095 - aspartate aminotransferase, at 2,194,367 to 2,195,581 _2095 HP15_2096: HP15_2096 - conserved hypothetical protein, at 2,195,593 to 2,196,063 _2096 HP15_2097: HP15_2097 - protease HtpX-like protein, at 2,196,159 to 2,197,040 _2097 HP15_2098: HP15_2098 - erythronate-4-phosphate dehydrogenase, at 2,197,090 to 2,198,241 _2098 Position (kb) 2196 2197 2198Strain fitness (log2 ratio) -1 0 1 2at 2195.392 kb on + strand, within HP15_2095at 2195.728 kb on - strand, within HP15_2096at 2195.728 kb on - strand, within HP15_2096at 2195.821 kb on + strand, within HP15_2096at 2195.829 kb on - strand, within HP15_2096at 2195.829 kb on - strand, within HP15_2096at 2195.934 kb on + strand, within HP15_2096at 2195.955 kb on + strand, within HP15_2096at 2196.109 kb on + strandat 2196.211 kb on + strandat 2196.264 kb on - strand, within HP15_2097at 2196.643 kb on - strand, within HP15_2097at 2196.768 kb on + strand, within HP15_2097at 2196.776 kb on - strand, within HP15_2097at 2196.872 kb on - strand, within HP15_2097at 2196.872 kb on - strand, within HP15_2097at 2196.988 kb on - strandat 2197.078 kb on + strandat 2197.081 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 0.3125 mM
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2,195,392 + HP15_2095 0.84 +0.0
2,195,728 - HP15_2096 0.29 +1.4
2,195,728 - HP15_2096 0.29 +0.1
2,195,821 + HP15_2096 0.48 +0.9
2,195,829 - HP15_2096 0.50 -0.8
2,195,829 - HP15_2096 0.50 -0.1
2,195,934 + HP15_2096 0.72 -0.2
2,195,955 + HP15_2096 0.77 -0.3
2,196,109 + +0.2
2,196,211 + -0.2
2,196,264 - HP15_2097 0.12 -0.1
2,196,643 - HP15_2097 0.55 +1.6
2,196,768 + HP15_2097 0.69 +0.6
2,196,776 - HP15_2097 0.70 +1.8
2,196,872 - HP15_2097 0.81 -0.1
2,196,872 - HP15_2097 0.81 +0.4
2,196,988 - -0.0
2,197,078 + -0.8
2,197,081 - +0.8

Or see this region's nucleotide sequence