Experiment: m.b. syringaldehyde 0.3125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1591 and HP15_1592 overlap by 8 nucleotides HP15_1592 and HP15_1593 are separated by 13 nucleotides
HP15_1591: HP15_1591 - conserved hypothetical protein, at 1,685,112 to 1,686,512
_1591
HP15_1592: HP15_1592 - conserved hypothetical protein, at 1,686,505 to 1,687,074
_1592
HP15_1593: HP15_1593 - patatin-like phospholipase domain-containing protein, at 1,687,088 to 1,688,560
_1593
Position (kb)
1686
1687
1688 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1685.535 kb on - strand, within HP15_1591 at 1685.614 kb on - strand, within HP15_1591 at 1685.698 kb on + strand, within HP15_1591 at 1685.698 kb on + strand, within HP15_1591 at 1685.698 kb on + strand, within HP15_1591 at 1685.706 kb on - strand, within HP15_1591 at 1685.738 kb on - strand, within HP15_1591 at 1685.879 kb on + strand, within HP15_1591 at 1685.887 kb on - strand, within HP15_1591 at 1685.887 kb on - strand, within HP15_1591 at 1685.951 kb on + strand, within HP15_1591 at 1685.954 kb on - strand, within HP15_1591 at 1686.040 kb on + strand, within HP15_1591 at 1686.170 kb on - strand, within HP15_1591 at 1686.238 kb on + strand, within HP15_1591 at 1686.442 kb on + strand at 1686.498 kb on - strand at 1686.605 kb on + strand, within HP15_1592 at 1686.820 kb on - strand, within HP15_1592 at 1686.835 kb on + strand, within HP15_1592 at 1686.924 kb on - strand, within HP15_1592 at 1686.933 kb on + strand, within HP15_1592 at 1687.001 kb on - strand, within HP15_1592 at 1687.084 kb on - strand at 1687.338 kb on + strand, within HP15_1593 at 1687.346 kb on - strand, within HP15_1593 at 1687.376 kb on - strand, within HP15_1593 at 1687.376 kb on - strand, within HP15_1593 at 1687.508 kb on + strand, within HP15_1593 at 1687.511 kb on - strand, within HP15_1593 at 1687.511 kb on - strand, within HP15_1593 at 1687.759 kb on + strand, within HP15_1593 at 1687.807 kb on + strand, within HP15_1593 at 1687.873 kb on + strand, within HP15_1593 at 1687.880 kb on + strand, within HP15_1593 at 1688.070 kb on - strand, within HP15_1593
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. syringaldehyde 0.3125 mM remove 1,685,535 - HP15_1591 0.30 -1.2 1,685,614 - HP15_1591 0.36 +0.4 1,685,698 + HP15_1591 0.42 -1.7 1,685,698 + HP15_1591 0.42 -0.3 1,685,698 + HP15_1591 0.42 +0.9 1,685,706 - HP15_1591 0.42 +1.7 1,685,738 - HP15_1591 0.45 +0.1 1,685,879 + HP15_1591 0.55 -1.0 1,685,887 - HP15_1591 0.55 +0.0 1,685,887 - HP15_1591 0.55 -1.3 1,685,951 + HP15_1591 0.60 +0.3 1,685,954 - HP15_1591 0.60 -1.3 1,686,040 + HP15_1591 0.66 +0.6 1,686,170 - HP15_1591 0.76 -0.6 1,686,238 + HP15_1591 0.80 +0.3 1,686,442 + +1.3 1,686,498 - +2.3 1,686,605 + HP15_1592 0.18 -0.6 1,686,820 - HP15_1592 0.55 +0.8 1,686,835 + HP15_1592 0.58 -0.6 1,686,924 - HP15_1592 0.74 -2.3 1,686,933 + HP15_1592 0.75 +0.5 1,687,001 - HP15_1592 0.87 -0.4 1,687,084 - +0.4 1,687,338 + HP15_1593 0.17 +0.4 1,687,346 - HP15_1593 0.18 +0.3 1,687,376 - HP15_1593 0.20 +1.7 1,687,376 - HP15_1593 0.20 -0.8 1,687,508 + HP15_1593 0.29 -0.6 1,687,511 - HP15_1593 0.29 +0.4 1,687,511 - HP15_1593 0.29 +0.3 1,687,759 + HP15_1593 0.46 -1.3 1,687,807 + HP15_1593 0.49 +1.0 1,687,873 + HP15_1593 0.53 +0.9 1,687,880 + HP15_1593 0.54 +0.7 1,688,070 - HP15_1593 0.67 +1.7
Or see this region's nucleotide sequence