Strain Fitness in Shewanella amazonensis SB2B around Sama_3421

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
4,048,877	+		Sama_3419	0.31	-0.6
4,048,877	+		Sama_3419	0.31	-0.4
4,048,877	+		Sama_3419	0.31	+1.0
4,048,877	+		Sama_3419	0.31	+0.7
4,048,878	-		Sama_3419	0.31	+1.0
4,048,878	-		Sama_3419	0.31	+0.8
4,048,878	-		Sama_3419	0.31	+0.1
4,048,878	-		Sama_3419	0.31	+0.2
4,048,878	-		Sama_3419	0.31	-0.2
4,048,880	-		Sama_3419	0.32	+0.5
4,048,889	+		Sama_3419	0.34	-0.7
4,048,889	+		Sama_3419	0.34	+0.6
4,048,890	-		Sama_3419	0.34	+0.1
4,048,903	+		Sama_3419	0.37	+1.6
4,048,904	-		Sama_3419	0.37	-0.6
4,048,932	+		Sama_3419	0.43	+1.7
4,048,932	+		Sama_3419	0.43	+2.2
4,048,933	-		Sama_3419	0.43	+0.3
4,048,933	-		Sama_3419	0.43	+0.3
4,048,933	-		Sama_3419	0.43	+0.4
4,048,933	-		Sama_3419	0.43	+0.5
4,048,933	-		Sama_3419	0.43	-0.7
4,048,933	-		Sama_3419	0.43	+0.8
4,048,933	-		Sama_3419	0.43	-0.0
4,048,933	-		Sama_3419	0.43	+0.0
4,048,937	+		Sama_3419	0.44	-0.9
4,048,937	+		Sama_3419	0.44	+1.4
4,048,937	+		Sama_3419	0.44	-0.8
4,048,938	-		Sama_3419	0.44	+0.1
4,048,938	-		Sama_3419	0.44	-0.8
4,048,938	-		Sama_3419	0.44	+0.1
4,048,938	-		Sama_3419	0.44	-0.7
4,048,938	-		Sama_3419	0.44	+0.1
4,048,938	-		Sama_3419	0.44	-0.7
4,048,938	-		Sama_3419	0.44	+0.6
4,048,938	-		Sama_3419	0.44	+0.2
4,048,938	-		Sama_3419	0.44	+0.2
4,048,938	-		Sama_3419	0.44	-0.6
4,048,938	-		Sama_3419	0.44	+0.2
4,049,035	-		Sama_3419	0.65	+0.1
4,049,051	+		Sama_3419	0.68	+0.3
4,049,051	+		Sama_3419	0.68	+0.9
4,049,052	-		Sama_3419	0.69	+0.5
4,049,052	-		Sama_3419	0.69	+0.8
4,049,052	-		Sama_3419	0.69	+1.3
4,049,237	+				-0.4
4,049,237	+				+0.1
4,049,237	+				-0.4
4,049,238	-				+0.0
4,049,260	+				-0.6
4,049,261	-				+0.3
4,049,287	+				+1.2
4,049,287	+				-0.3
4,049,319	+				+1.9
4,049,319	+				-1.0
4,049,320	-				-0.2
4,049,328	+				+1.9
4,049,376	+		Sama_3420	0.13	+0.6
4,049,376	+		Sama_3420	0.13	+0.1
4,049,376	+		Sama_3420	0.13	-0.2
4,049,377	-		Sama_3420	0.14	+0.6
4,049,377	-		Sama_3420	0.14	+0.6
4,049,468	+		Sama_3420	0.30	-0.2
4,049,469	-		Sama_3420	0.30	+1.6
4,049,469	-		Sama_3420	0.30	+0.7
4,049,469	-		Sama_3420	0.30	-1.2
4,049,517	+		Sama_3420	0.39	+0.1
4,049,518	-		Sama_3420	0.39	-0.0
4,049,535	+		Sama_3420	0.42	-0.4
4,049,535	+		Sama_3420	0.42	+1.3
4,049,536	-		Sama_3420	0.42	-0.6
4,049,569	+		Sama_3420	0.48	-0.1
4,049,569	+		Sama_3420	0.48	-0.2
4,049,591	+		Sama_3420	0.52	-0.5
4,049,592	-		Sama_3420	0.53	+0.6
4,049,592	-		Sama_3420	0.53	-0.7
4,049,622	+		Sama_3420	0.58	-0.8
4,049,622	+		Sama_3420	0.58	-0.2
4,049,622	+		Sama_3420	0.58	-0.7
4,049,622	+		Sama_3420	0.58	-0.4
4,049,622	+		Sama_3420	0.58	+1.5
4,049,622	+		Sama_3420	0.58	+0.8
4,049,622	+		Sama_3420	0.58	-1.1
4,049,622	+		Sama_3420	0.58	+0.7
4,049,622	+		Sama_3420	0.58	+0.1
4,049,622	+		Sama_3420	0.58	-0.4
4,049,622	+		Sama_3420	0.58	-0.1
4,049,623	-		Sama_3420	0.58	-1.7
4,049,623	-		Sama_3420	0.58	-1.8
4,049,623	-		Sama_3420	0.58	-2.1
4,049,623	-		Sama_3420	0.58	-0.9
4,049,623	-		Sama_3420	0.58	+2.1
4,049,623	-		Sama_3420	0.58	+0.6
4,049,623	-		Sama_3420	0.58	-0.2
4,049,654	+		Sama_3420	0.64	+0.1
4,049,655	-		Sama_3420	0.64	-1.1
4,049,685	-		Sama_3420	0.69	-0.6
4,049,723	-		Sama_3420	0.76	-0.4
4,049,723	-		Sama_3420	0.76	-1.4
4,049,749	+		Sama_3420	0.81	+0.6
4,049,750	-		Sama_3420	0.81	+0.6
4,049,750	-		Sama_3420	0.81	+1.2
4,049,750	-		Sama_3420	0.81	+1.2
4,049,760	+		Sama_3420	0.83	+0.5
4,049,760	+		Sama_3420	0.83	-0.7
4,049,761	-		Sama_3420	0.83	+0.3
4,049,761	-		Sama_3420	0.83	-0.2
4,049,780	+		Sama_3420	0.87	-0.3
4,049,797	-		Sama_3420	0.90	-1.5
4,049,815	+				+0.1
4,049,815	+				-1.1
4,049,816	-				+0.5
4,049,836	+				-1.2
4,049,837	-				+0.4
4,049,837	-				-0.2
4,049,859	+				-0.1
4,049,859	+				+0.7
4,049,859	+				+0.9
4,049,859	+				+0.1
4,049,859	+				-1.8
4,049,859	+				-0.4
4,049,860	-				+0.6
4,049,860	-				-1.1
4,049,885	+				+1.3
4,049,885	+				+1.2
4,050,002	-		Sama_3421	0.21	-1.2
4,050,002	-		Sama_3421	0.21	+1.1
4,050,002	-		Sama_3421	0.21	+0.6
4,050,014	+		Sama_3421	0.23	+1.7
4,050,014	+		Sama_3421	0.23	-1.3
4,050,015	-		Sama_3421	0.23	+0.1
4,050,015	-		Sama_3421	0.23	-0.1
4,050,015	-		Sama_3421	0.23	+1.2
4,050,025	+		Sama_3421	0.24	+0.4
4,050,025	+		Sama_3421	0.24	-2.0
4,050,025	+		Sama_3421	0.24	+0.4
4,050,025	+		Sama_3421	0.24	+0.3
4,050,026	-		Sama_3421	0.25	+0.6
4,050,026	-		Sama_3421	0.25	-0.8
4,050,026	-		Sama_3421	0.25	-0.1
4,050,026	-		Sama_3421	0.25	-2.1
4,050,026	-		Sama_3421	0.25	-0.3
4,050,026	-		Sama_3421	0.25	-0.4
4,050,026	-		Sama_3421	0.25	+0.8
4,050,030	+		Sama_3421	0.25	+1.3
4,050,048	-		Sama_3421	0.28	-0.9
4,050,066	+		Sama_3421	0.31	-0.4
4,050,067	-		Sama_3421	0.31	-1.5
4,050,091	+		Sama_3421	0.35	-1.1
4,050,091	+		Sama_3421	0.35	-0.0
4,050,092	-		Sama_3421	0.35	-0.6
4,050,148	+		Sama_3421	0.44	-0.8
4,050,148	+		Sama_3421	0.44	-0.7
4,050,296	+		Sama_3421	0.68	-0.9
4,050,296	+		Sama_3421	0.68	+0.6
4,050,297	-		Sama_3421	0.68	+0.8
4,050,412	+		Sama_3421	0.86	+0.9
4,050,413	-		Sama_3421	0.86	-1.4
4,050,413	-		Sama_3421	0.86	-0.0
4,050,453	+				+2.5
4,050,453	+				-0.1
4,050,454	-				-1.3
4,050,454	-				-1.3
4,050,465	+				+1.1
4,050,466	-				+0.7
4,050,466	-				+1.3
4,050,532	-				+0.2
4,050,549	+				-2.1
4,050,549	+				-2.0
4,050,565	-				-0.3
4,050,605	+				-0.4
4,050,605	+				-1.3
4,050,606	-				+0.2
4,050,606	-				-0.5
4,050,606	-				-0.4
4,050,606	-				+0.2
4,050,606	-				-0.2
4,050,664	+				-1.5
4,050,664	+				+0.5
4,050,664	+				-0.9
4,050,664	+				-1.2
4,050,664	+				-2.1
4,050,664	+				-0.3
4,050,664	+				-0.3
4,050,664	+				-0.3
4,050,664	+				-0.4
4,050,664	+				+0.4
4,050,665	-				+0.1
4,050,665	-				-0.2
4,050,665	-				+1.0
4,050,665	-				+1.1
4,050,665	-				-0.2
4,050,665	-				-1.6
4,050,665	-				-0.5
4,050,665	-				+1.9
4,050,665	-				+0.9
4,050,665	-				+0.1
4,050,665	-				-0.7
4,050,666	+				+0.6
4,050,666	+				+0.8
4,050,666	+				+0.8
4,050,666	+				-0.8
4,050,666	+				-0.6
4,050,666	+				+1.2
4,050,667	-				-0.2
4,050,667	-				-0.3
4,050,667	-				+0.3
4,050,667	-				-0.2
4,050,667	-				-0.5
4,050,667	-				+1.1
4,050,700	+				+1.3
4,050,700	+				-0.4
4,050,726	+				+0.8
4,050,726	+				-0.7
4,050,726	+				+0.5
4,050,727	-				+0.8
4,050,798	-				+1.1
4,050,798	-				-0.4
4,050,798	-				-2.0
4,050,798	-				-0.9
4,050,865	+				+2.2
4,050,929	-				-1.8
4,050,934	+		Sama_3422	0.10	-0.9
4,050,935	-		Sama_3422	0.10	-0.3
4,050,953	+		Sama_3422	0.11	+1.2
4,050,953	+		Sama_3422	0.11	-1.1
4,050,954	-		Sama_3422	0.11	-1.1
4,050,954	-		Sama_3422	0.11	-0.3
4,050,954	-		Sama_3422	0.11	-1.4
4,050,954	-		Sama_3422	0.11	+0.7
4,050,954	-		Sama_3422	0.11	-0.6
4,050,954	-		Sama_3422	0.11	-0.6
4,050,957	+		Sama_3422	0.11	+1.0
4,050,957	+		Sama_3422	0.11	+0.0
4,050,957	+		Sama_3422	0.11	-2.2
4,050,957	+		Sama_3422	0.11	+2.5
4,050,957	+		Sama_3422	0.11	-0.8
4,050,957	+		Sama_3422	0.11	-1.0
4,050,957	+		Sama_3422	0.11	-1.5
4,050,958	-		Sama_3422	0.11	+0.1
4,050,958	-		Sama_3422	0.11	-0.8
4,051,043	+		Sama_3422	0.15	+0.4
4,051,044	-		Sama_3422	0.15	+0.3
4,051,077	-		Sama_3422	0.17	+0.6
4,051,111	+		Sama_3422	0.18	+1.6
4,051,111	+		Sama_3422	0.18	-1.3
4,051,167	+		Sama_3422	0.21	-1.2
4,051,167	+		Sama_3422	0.21	+0.3
4,051,167	+		Sama_3422	0.21	-0.3
4,051,167	+		Sama_3422	0.21	-0.3
4,051,216	+		Sama_3422	0.23	+0.0
4,051,216	+		Sama_3422	0.23	+2.5
4,051,216	+		Sama_3422	0.23	+0.1
4,051,308	+		Sama_3422	0.28	+0.9
4,051,308	+		Sama_3422	0.28	+0.9
4,051,308	+		Sama_3422	0.28	-0.9
4,051,309	-		Sama_3422	0.28	+0.5
4,051,309	-		Sama_3422	0.28	+0.3
4,051,309	-		Sama_3422	0.28	-1.2
4,051,309	-		Sama_3422	0.28	-0.5
4,051,309	-		Sama_3422	0.28	-0.7
4,051,327	+		Sama_3422	0.29	-0.6
4,051,356	+		Sama_3422	0.30	-0.1
4,051,357	-		Sama_3422	0.30	-0.0
4,051,357	-		Sama_3422	0.30	-1.9
4,051,357	-		Sama_3422	0.30	-0.4
4,051,357	-		Sama_3422	0.30	+0.3
4,051,357	-		Sama_3422	0.30	-1.0
4,051,361	+		Sama_3422	0.30	-1.1
4,051,361	+		Sama_3422	0.30	+0.4
4,051,361	+		Sama_3422	0.30	+0.7
4,051,362	-		Sama_3422	0.30	-0.6
4,051,362	-		Sama_3422	0.30	-0.5
4,051,362	-		Sama_3422	0.30	+1.3
4,051,379	+		Sama_3422	0.31	+0.5
4,051,380	-		Sama_3422	0.31	+0.3
4,051,380	-		Sama_3422	0.31	+0.2
4,051,447	+		Sama_3422	0.34	-0.2
4,051,448	-		Sama_3422	0.34	-0.4
4,051,459	+		Sama_3422	0.35	-0.6
4,051,472	+		Sama_3422	0.35	+0.1
4,051,473	-		Sama_3422	0.35	+0.2
4,051,473	-		Sama_3422	0.35	+0.3
4,051,473	-		Sama_3422	0.35	+1.5