Strain Fitness in Shewanella amazonensis SB2B around Sama_2681

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
3,209,746	+		Sama_2680	0.45	-0.2
3,209,747	-		Sama_2680	0.45	-0.8
3,209,748	+		Sama_2680	0.45	-1.8
3,209,749	-		Sama_2680	0.45	-1.0
3,209,749	-		Sama_2680	0.45	-1.5
3,209,749	-		Sama_2680	0.45	-1.0
3,210,007	-		Sama_2680	0.66	+0.5
3,210,007	-		Sama_2680	0.66	-0.1
3,210,007	-		Sama_2680	0.66	-0.1
3,210,007	-		Sama_2680	0.66	+0.7
3,210,007	-		Sama_2680	0.66	+0.2
3,210,050	+		Sama_2680	0.69	-0.3
3,210,051	-		Sama_2680	0.69	+0.6
3,210,051	-		Sama_2680	0.69	-0.7
3,210,066	+		Sama_2680	0.70	-0.4
3,210,066	+		Sama_2680	0.70	-0.4
3,210,066	+		Sama_2680	0.70	+0.6
3,210,066	+		Sama_2680	0.70	-0.5
3,210,067	-		Sama_2680	0.70	+1.2
3,210,067	-		Sama_2680	0.70	-1.0
3,210,067	-		Sama_2680	0.70	+2.9
3,210,085	+		Sama_2680	0.72	-2.5
3,210,085	+		Sama_2680	0.72	-1.6
3,210,085	+		Sama_2680	0.72	+0.4
3,210,085	+		Sama_2680	0.72	+0.6
3,210,085	+		Sama_2680	0.72	+0.4
3,210,085	+		Sama_2680	0.72	-2.1
3,210,085	+		Sama_2680	0.72	-0.0
3,210,086	-		Sama_2680	0.72	+0.8
3,210,086	-		Sama_2680	0.72	-0.2
3,210,086	-		Sama_2680	0.72	-0.6
3,210,324	-				-0.6
3,210,324	-				+1.2
3,210,346	+				+0.1
3,210,347	-				-0.7
3,210,347	-				-1.3
3,210,414	+				-1.0
3,210,415	-				-0.6
3,210,518	+				+0.7
3,210,519	-				+0.8
3,210,528	+				-0.7
3,210,529	-				-0.0
3,210,565	-				-0.2
3,210,645	+				+0.0
3,210,697	+				+0.5
3,210,697	+				-0.4
3,210,697	+				+0.4
3,210,697	+				-0.5
3,210,698	-				-0.2
3,210,756	+				-1.3
3,210,846	-				+2.6
3,210,879	+		Sama_2681	0.12	+0.5
3,210,879	+		Sama_2681	0.12	-0.6
3,210,879	+		Sama_2681	0.12	+0.5
3,210,879	+		Sama_2681	0.12	-0.1
3,210,880	-		Sama_2681	0.12	-0.2
3,210,880	-		Sama_2681	0.12	-1.4
3,210,880	-		Sama_2681	0.12	-2.1
3,210,910	+		Sama_2681	0.15	-0.3
3,210,910	+		Sama_2681	0.15	+0.3
3,210,910	+		Sama_2681	0.15	+0.0
3,210,910	+		Sama_2681	0.15	-0.2
3,210,910	+		Sama_2681	0.15	-2.7
3,210,910	+		Sama_2681	0.15	-1.0
3,210,910	+		Sama_2681	0.15	-1.3
3,210,911	-		Sama_2681	0.15	-0.9
3,210,911	-		Sama_2681	0.15	+0.4
3,210,911	-		Sama_2681	0.15	-0.4
3,210,936	-		Sama_2681	0.17	-0.8
3,210,936	-		Sama_2681	0.17	-0.4
3,210,994	-		Sama_2681	0.22	-1.3
3,211,025	+		Sama_2681	0.24	+1.2
3,211,025	+		Sama_2681	0.24	-2.8
3,211,126	+		Sama_2681	0.33	-1.0
3,211,126	+		Sama_2681	0.33	-0.5
3,211,126	+		Sama_2681	0.33	-0.0
3,211,127	-		Sama_2681	0.33	-1.0
3,211,279	-		Sama_2681	0.46	+0.1
3,211,279	-		Sama_2681	0.46	-1.0
3,211,288	+		Sama_2681	0.47	-1.8
3,211,288	+		Sama_2681	0.47	+0.2
3,211,289	-		Sama_2681	0.47	-0.1
3,211,289	-		Sama_2681	0.47	-1.6
3,211,289	-		Sama_2681	0.47	+0.0
3,211,328	+		Sama_2681	0.50	+0.9
3,211,358	+		Sama_2681	0.53	-2.0
3,211,358	+		Sama_2681	0.53	+0.4
3,211,358	+		Sama_2681	0.53	+0.1
3,211,359	-		Sama_2681	0.53	+0.8
3,211,406	-		Sama_2681	0.57	+0.4
3,211,418	-		Sama_2681	0.58	-1.3
3,211,418	-		Sama_2681	0.58	-0.1
3,211,418	-		Sama_2681	0.58	-0.4
3,211,418	-		Sama_2681	0.58	-1.2
3,211,418	-		Sama_2681	0.58	-0.3
3,211,418	-		Sama_2681	0.58	-0.6
3,211,420	+		Sama_2681	0.58	+0.6
3,211,420	+		Sama_2681	0.58	+0.0
3,211,420	+		Sama_2681	0.58	-2.3
3,211,420	+		Sama_2681	0.58	-0.8
3,211,420	+		Sama_2681	0.58	-0.2
3,211,420	+		Sama_2681	0.58	-0.6
3,211,420	+		Sama_2681	0.58	-0.2
3,211,421	-		Sama_2681	0.58	-1.6
3,211,421	-		Sama_2681	0.58	-0.9
3,211,421	-		Sama_2681	0.58	-1.1
3,211,441	+		Sama_2681	0.60	+0.1
3,211,441	+		Sama_2681	0.60	-0.7
3,211,441	+		Sama_2681	0.60	-0.1
3,211,441	+		Sama_2681	0.60	+0.6
3,211,441	+		Sama_2681	0.60	+0.0
3,211,441	+		Sama_2681	0.60	+0.4
3,211,441	+		Sama_2681	0.60	-1.4
3,211,441	+		Sama_2681	0.60	-0.2
3,211,441	+		Sama_2681	0.60	-1.1
3,211,441	+		Sama_2681	0.60	-1.1
3,211,441	+		Sama_2681	0.60	-0.6
3,211,441	+		Sama_2681	0.60	+1.6
3,211,441	+		Sama_2681	0.60	-0.5
3,211,442	-		Sama_2681	0.60	+0.3
3,211,442	-		Sama_2681	0.60	+0.6
3,211,442	-		Sama_2681	0.60	-1.4
3,211,442	-		Sama_2681	0.60	+0.5
3,211,442	-		Sama_2681	0.60	-0.4
3,211,442	-		Sama_2681	0.60	+1.2
3,211,442	-		Sama_2681	0.60	-0.6
3,211,442	-		Sama_2681	0.60	-1.4
3,211,468	+		Sama_2681	0.62	+0.4
3,211,468	+		Sama_2681	0.62	+1.0
3,211,468	+		Sama_2681	0.62	-0.8
3,211,468	+		Sama_2681	0.62	-0.1
3,211,468	+		Sama_2681	0.62	+0.1
3,211,468	+		Sama_2681	0.62	-1.4
3,211,469	-		Sama_2681	0.62	+0.5
3,211,469	-		Sama_2681	0.62	-2.0
3,211,469	-		Sama_2681	0.62	-0.1
3,211,469	-		Sama_2681	0.62	+1.9
3,211,469	-		Sama_2681	0.62	-2.1
3,211,469	-		Sama_2681	0.62	+1.5
3,211,477	+		Sama_2681	0.63	-0.7
3,211,477	+		Sama_2681	0.63	+0.1
3,211,478	-		Sama_2681	0.63	+0.3
3,211,478	-		Sama_2681	0.63	-1.3
3,211,544	+		Sama_2681	0.68	+0.5
3,211,545	-		Sama_2681	0.68	+0.1
3,211,545	-		Sama_2681	0.68	+1.4
3,211,545	-		Sama_2681	0.68	+0.1
3,211,545	-		Sama_2681	0.68	+0.4
3,211,545	-		Sama_2681	0.68	+0.4
3,211,545	-		Sama_2681	0.68	-0.2
3,211,545	-		Sama_2681	0.68	+0.7
3,211,563	-		Sama_2681	0.70	-1.9
3,211,678	+		Sama_2681	0.80	-1.7
3,211,678	+		Sama_2681	0.80	-1.0
3,211,678	+		Sama_2681	0.80	-1.2
3,211,678	+		Sama_2681	0.80	-1.9
3,211,678	+		Sama_2681	0.80	+0.2
3,211,678	+		Sama_2681	0.80	-1.1
3,211,678	+		Sama_2681	0.80	-0.1
3,211,678	+		Sama_2681	0.80	-0.9
3,211,678	+		Sama_2681	0.80	-0.3
3,211,678	+		Sama_2681	0.80	-0.9
3,211,679	-		Sama_2681	0.80	+0.9
3,211,679	-		Sama_2681	0.80	+0.2
3,211,679	-		Sama_2681	0.80	-0.6
3,211,679	-		Sama_2681	0.80	+0.3
3,211,679	-		Sama_2681	0.80	+0.3
3,211,679	-		Sama_2681	0.80	+0.2
3,211,679	-		Sama_2681	0.80	-0.6
3,211,679	-		Sama_2681	0.80	-0.2
3,211,679	-		Sama_2681	0.80	+0.2
3,211,679	-		Sama_2681	0.80	+1.5
3,211,679	-		Sama_2681	0.80	-0.5
3,211,768	+		Sama_2681	0.87	-0.9
3,211,768	+		Sama_2681	0.87	-0.0
3,211,768	+		Sama_2681	0.87	+0.4
3,211,769	-		Sama_2681	0.87	+0.2
3,211,769	-		Sama_2681	0.87	-0.0
3,211,798	+		Sama_2681	0.90	-2.1
3,211,798	+		Sama_2681	0.90	-1.0
3,211,799	-				+0.2
3,211,799	-				+0.1
3,211,886	+				+0.3
3,211,886	+				+0.1
3,211,887	-				+1.8
3,211,887	-				+2.3
3,211,887	-				+0.1
3,211,915	+				-0.1
3,211,915	+				-0.7
3,211,989	+				-0.4
3,211,989	+				+0.2
3,211,989	+				+0.8
3,211,990	-				+0.3
3,211,990	-				+1.2
3,212,013	+				+0.3
3,212,013	+				-0.1
3,212,014	-				+2.5
3,212,014	-				-0.6
3,212,087	+				+0.3
3,212,087	+				-0.5
3,212,088	-				-0.4
3,212,088	-				+2.9
3,212,133	-				-0.3
3,212,199	+		Sama_2682	0.12	+0.5
3,212,199	+		Sama_2682	0.12	+0.6
3,212,244	+		Sama_2682	0.17	-1.1
3,212,309	+		Sama_2682	0.24	-1.0
3,212,310	-		Sama_2682	0.24	+0.5
3,212,310	-		Sama_2682	0.24	+2.0
3,212,315	-		Sama_2682	0.25	+0.1
3,212,322	+		Sama_2682	0.25	+0.0
3,212,356	+		Sama_2682	0.29	-1.1
3,212,356	+		Sama_2682	0.29	+0.3
3,212,356	+		Sama_2682	0.29	-0.8
3,212,356	+		Sama_2682	0.29	+0.9
3,212,356	+		Sama_2682	0.29	+0.4
3,212,356	+		Sama_2682	0.29	+0.1
3,212,357	-		Sama_2682	0.29	+0.3
3,212,357	-		Sama_2682	0.29	-0.4
3,212,357	-		Sama_2682	0.29	-0.2
3,212,357	-		Sama_2682	0.29	+1.4
3,212,357	-		Sama_2682	0.29	-0.2
3,212,417	+		Sama_2682	0.36	-0.5
3,212,417	+		Sama_2682	0.36	-1.2
3,212,418	-		Sama_2682	0.36	-0.8
3,212,418	-		Sama_2682	0.36	+0.9
3,212,427	-		Sama_2682	0.37	-0.4
3,212,427	-		Sama_2682	0.37	-0.0
3,212,427	-		Sama_2682	0.37	-0.1
3,212,427	-		Sama_2682	0.37	-0.6
3,212,427	-		Sama_2682	0.37	-0.6
3,212,427	-		Sama_2682	0.37	-0.5
3,212,427	-		Sama_2682	0.37	-0.0
3,212,427	-		Sama_2682	0.37	+0.9
3,212,428	+		Sama_2682	0.37	-0.4
3,212,429	-		Sama_2682	0.37	-0.4
3,212,429	-		Sama_2682	0.37	+1.2
3,212,429	-		Sama_2682	0.37	-0.9
3,212,429	-		Sama_2682	0.37	-0.4
3,212,490	+		Sama_2682	0.44	+2.5
3,212,490	+		Sama_2682	0.44	+0.1
3,212,491	-		Sama_2682	0.44	+0.3
3,212,491	-		Sama_2682	0.44	-0.4
3,212,491	-		Sama_2682	0.44	+0.2
3,212,491	-		Sama_2682	0.44	-1.8
3,212,623	-		Sama_2682	0.58	-1.9
3,212,623	-		Sama_2682	0.58	+1.0
3,212,623	-		Sama_2682	0.58	+0.7
3,212,703	-		Sama_2682	0.67	-0.1
3,212,768	+		Sama_2682	0.74	+1.0
3,212,768	+		Sama_2682	0.74	+1.1
3,212,769	-		Sama_2682	0.74	+0.0
3,212,800	+		Sama_2682	0.78	+0.2
3,212,801	-		Sama_2682	0.78	-0.2
3,212,830	-		Sama_2682	0.81	-0.6
3,212,830	-		Sama_2682	0.81	+0.9
3,212,848	-		Sama_2682	0.83	-0.6
3,212,887	+		Sama_2682	0.87	-0.1
3,212,887	+		Sama_2682	0.87	-0.8
3,212,887	+		Sama_2682	0.87	-0.4
3,212,888	-		Sama_2682	0.87	-0.1
3,212,888	-		Sama_2682	0.87	-0.0