Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_833 and HP15_834 are separated by 121 nucleotides HP15_834 and HP15_835 overlap by 7 nucleotides HP15_835 and HP15_836 are separated by 251 nucleotides
HP15_833: HP15_833 - 2,5-diketo-D-gluconic acid reductase B, at 851,577 to 852,386
_833
HP15_834: HP15_834 - glutathione-dependent formaldehyde-activating, GFA, at 852,508 to 852,921
_834
HP15_835: HP15_835 - secreted protein containing glucose sorbosone dehydrogenase domain, at 852,915 to 854,036
_835
HP15_836: HP15_836 - conserved hypothetical protein, at 854,288 to 855,109
_836
Position (kb) 852
853
854
855 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 851.915 kb on + strand, within HP15_833 at 852.033 kb on + strand, within HP15_833 at 852.051 kb on - strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.115 kb on + strand, within HP15_833 at 852.123 kb on - strand, within HP15_833 at 852.123 kb on - strand, within HP15_833 at 852.215 kb on + strand, within HP15_833 at 852.277 kb on - strand, within HP15_833 at 852.292 kb on + strand, within HP15_833 at 852.478 kb on + strand at 852.478 kb on + strand at 852.486 kb on - strand at 852.498 kb on + strand at 852.498 kb on + strand at 852.602 kb on - strand, within HP15_834 at 852.653 kb on - strand, within HP15_834 at 852.659 kb on - strand, within HP15_834 at 852.752 kb on + strand, within HP15_834 at 853.034 kb on - strand, within HP15_835 at 853.141 kb on + strand, within HP15_835 at 853.149 kb on - strand, within HP15_835 at 853.220 kb on + strand, within HP15_835 at 853.238 kb on - strand, within HP15_835 at 853.323 kb on - strand, within HP15_835 at 853.336 kb on - strand, within HP15_835 at 853.503 kb on - strand, within HP15_835 at 853.503 kb on - strand, within HP15_835 at 853.537 kb on - strand, within HP15_835 at 853.605 kb on + strand, within HP15_835 at 853.640 kb on + strand, within HP15_835 at 853.658 kb on - strand, within HP15_835 at 853.685 kb on - strand, within HP15_835 at 853.798 kb on - strand, within HP15_835 at 853.919 kb on + strand, within HP15_835 at 854.019 kb on + strand at 854.020 kb on - strand at 854.131 kb on - strand at 854.142 kb on + strand at 854.276 kb on + strand at 854.326 kb on + strand at 854.439 kb on + strand, within HP15_836 at 854.467 kb on - strand, within HP15_836 at 854.524 kb on - strand, within HP15_836 at 854.524 kb on - strand, within HP15_836 at 854.573 kb on - strand, within HP15_836 at 854.590 kb on + strand, within HP15_836 at 854.608 kb on - strand, within HP15_836 at 854.644 kb on - strand, within HP15_836 at 854.646 kb on + strand, within HP15_836 at 854.894 kb on - strand, within HP15_836 at 855.027 kb on - strand at 855.029 kb on + strand at 855.029 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 851,915 + HP15_833 0.42 -1.4 852,033 + HP15_833 0.56 -0.5 852,051 - HP15_833 0.59 -0.8 852,115 + HP15_833 0.66 +0.2 852,115 + HP15_833 0.66 +0.0 852,115 + HP15_833 0.66 -0.3 852,115 + HP15_833 0.66 +0.5 852,123 - HP15_833 0.67 +0.2 852,123 - HP15_833 0.67 -0.2 852,215 + HP15_833 0.79 +1.1 852,277 - HP15_833 0.86 +0.4 852,292 + HP15_833 0.88 +0.5 852,478 + -0.0 852,478 + +0.2 852,486 - -2.6 852,498 + -0.8 852,498 + +0.5 852,602 - HP15_834 0.23 -0.1 852,653 - HP15_834 0.35 +0.4 852,659 - HP15_834 0.36 -0.1 852,752 + HP15_834 0.59 -0.3 853,034 - HP15_835 0.11 +3.0 853,141 + HP15_835 0.20 -0.1 853,149 - HP15_835 0.21 +0.1 853,220 + HP15_835 0.27 -0.8 853,238 - HP15_835 0.29 +0.6 853,323 - HP15_835 0.36 -1.4 853,336 - HP15_835 0.38 +0.0 853,503 - HP15_835 0.52 -0.6 853,503 - HP15_835 0.52 +0.3 853,537 - HP15_835 0.55 +1.1 853,605 + HP15_835 0.61 -0.2 853,640 + HP15_835 0.65 -0.7 853,658 - HP15_835 0.66 -0.7 853,685 - HP15_835 0.69 -0.8 853,798 - HP15_835 0.79 -0.7 853,919 + HP15_835 0.89 -1.2 854,019 + -1.2 854,020 - -0.3 854,131 - +0.4 854,142 + -0.1 854,276 + +0.4 854,326 + -0.1 854,439 + HP15_836 0.18 +0.9 854,467 - HP15_836 0.22 -0.3 854,524 - HP15_836 0.29 -0.7 854,524 - HP15_836 0.29 +0.2 854,573 - HP15_836 0.35 -1.1 854,590 + HP15_836 0.37 -0.6 854,608 - HP15_836 0.39 +3.8 854,644 - HP15_836 0.43 -0.1 854,646 + HP15_836 0.44 -0.4 854,894 - HP15_836 0.74 +1.4 855,027 - -1.8 855,029 + -0.3 855,029 + +1.9
Or see this region's nucleotide sequence