Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_725 and HP15_726 overlap by 1 nucleotides HP15_726 and HP15_727 are separated by 25 nucleotides HP15_727 and HP15_728 are separated by 76 nucleotides
HP15_725: HP15_725 - two component, sigma54 specific, transcriptional regulator, Fis family, at 735,528 to 736,880
_725
HP15_726: HP15_726 - hypothetical protein, at 736,880 to 737,008
_726
HP15_727: HP15_727 - methyl-accepting chemotaxis sensory transducer, at 737,034 to 738,728
_727
HP15_728: HP15_728 - PhoH family protein, at 738,805 to 740,160
_728
Position (kb) 737
738
739 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 736.103 kb on - strand, within HP15_725 at 736.256 kb on + strand, within HP15_725 at 736.282 kb on - strand, within HP15_725 at 736.283 kb on - strand, within HP15_725 at 736.490 kb on + strand, within HP15_725 at 736.560 kb on - strand, within HP15_725 at 736.620 kb on + strand, within HP15_725 at 736.628 kb on - strand, within HP15_725 at 736.673 kb on + strand, within HP15_725 at 737.113 kb on + strand at 737.113 kb on + strand at 737.119 kb on + strand at 737.127 kb on - strand at 737.269 kb on + strand, within HP15_727 at 737.277 kb on - strand, within HP15_727 at 737.277 kb on - strand, within HP15_727 at 737.277 kb on - strand, within HP15_727 at 737.373 kb on - strand, within HP15_727 at 737.375 kb on + strand, within HP15_727 at 737.383 kb on + strand, within HP15_727 at 737.391 kb on - strand, within HP15_727 at 737.391 kb on - strand, within HP15_727 at 737.457 kb on - strand, within HP15_727 at 737.459 kb on + strand, within HP15_727 at 737.467 kb on - strand, within HP15_727 at 737.467 kb on - strand, within HP15_727 at 737.467 kb on - strand, within HP15_727 at 737.467 kb on - strand, within HP15_727 at 737.472 kb on - strand, within HP15_727 at 737.500 kb on - strand, within HP15_727 at 737.601 kb on - strand, within HP15_727 at 737.661 kb on + strand, within HP15_727 at 737.766 kb on + strand, within HP15_727 at 737.837 kb on - strand, within HP15_727 at 737.888 kb on + strand, within HP15_727 at 737.896 kb on - strand, within HP15_727 at 738.081 kb on + strand, within HP15_727 at 738.108 kb on + strand, within HP15_727 at 738.123 kb on - strand, within HP15_727 at 738.199 kb on - strand, within HP15_727 at 738.199 kb on - strand, within HP15_727 at 738.199 kb on - strand, within HP15_727 at 738.262 kb on - strand, within HP15_727 at 738.314 kb on + strand at 738.401 kb on + strand, within HP15_727 at 738.475 kb on + strand, within HP15_727 at 738.485 kb on + strand, within HP15_727 at 738.485 kb on + strand, within HP15_727 at 738.544 kb on - strand, within HP15_727 at 738.572 kb on + strand at 738.597 kb on - strand at 738.729 kb on - strand at 738.853 kb on + strand at 738.875 kb on + strand at 738.907 kb on + strand at 738.915 kb on - strand at 738.959 kb on - strand, within HP15_728 at 738.975 kb on + strand, within HP15_728 at 739.007 kb on + strand, within HP15_728 at 739.128 kb on + strand, within HP15_728 at 739.223 kb on + strand, within HP15_728 at 739.243 kb on + strand, within HP15_728 at 739.358 kb on - strand, within HP15_728 at 739.361 kb on + strand, within HP15_728 at 739.482 kb on - strand, within HP15_728 at 739.676 kb on + strand, within HP15_728
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 736,103 - HP15_725 0.42 +1.0 736,256 + HP15_725 0.54 +0.2 736,282 - HP15_725 0.56 +0.5 736,283 - HP15_725 0.56 -0.2 736,490 + HP15_725 0.71 -0.1 736,560 - HP15_725 0.76 -0.4 736,620 + HP15_725 0.81 +0.0 736,628 - HP15_725 0.81 +0.6 736,673 + HP15_725 0.85 +0.2 737,113 + -0.8 737,113 + -0.4 737,119 + -0.7 737,127 - -0.6 737,269 + HP15_727 0.14 -0.6 737,277 - HP15_727 0.14 -3.9 737,277 - HP15_727 0.14 +0.8 737,277 - HP15_727 0.14 -1.6 737,373 - HP15_727 0.20 -1.4 737,375 + HP15_727 0.20 -1.0 737,383 + HP15_727 0.21 -0.4 737,391 - HP15_727 0.21 +0.2 737,391 - HP15_727 0.21 +0.2 737,457 - HP15_727 0.25 +0.5 737,459 + HP15_727 0.25 +0.5 737,467 - HP15_727 0.26 +0.8 737,467 - HP15_727 0.26 -0.4 737,467 - HP15_727 0.26 -0.3 737,467 - HP15_727 0.26 -1.1 737,472 - HP15_727 0.26 -0.0 737,500 - HP15_727 0.27 -1.0 737,601 - HP15_727 0.33 +0.7 737,661 + HP15_727 0.37 -0.7 737,766 + HP15_727 0.43 +0.1 737,837 - HP15_727 0.47 -0.2 737,888 + HP15_727 0.50 +0.1 737,896 - HP15_727 0.51 -0.2 738,081 + HP15_727 0.62 -0.3 738,108 + HP15_727 0.63 -0.2 738,123 - HP15_727 0.64 -1.5 738,199 - HP15_727 0.69 +0.0 738,199 - HP15_727 0.69 +0.8 738,199 - HP15_727 0.69 -0.1 738,262 - HP15_727 0.72 -1.0 738,314 + -0.7 738,401 + HP15_727 0.81 -0.3 738,475 + HP15_727 0.85 -0.1 738,485 + HP15_727 0.86 -0.5 738,485 + HP15_727 0.86 -0.4 738,544 - HP15_727 0.89 -0.1 738,572 + +1.7 738,597 - +0.3 738,729 - -0.2 738,853 + -1.7 738,875 + -0.1 738,907 + +0.6 738,915 - +0.8 738,959 - HP15_728 0.11 -0.0 738,975 + HP15_728 0.13 -0.8 739,007 + HP15_728 0.15 -0.2 739,128 + HP15_728 0.24 -0.4 739,223 + HP15_728 0.31 +1.2 739,243 + HP15_728 0.32 +0.9 739,358 - HP15_728 0.41 -0.7 739,361 + HP15_728 0.41 -0.4 739,482 - HP15_728 0.50 -0.7 739,676 + HP15_728 0.64 +0.4
Or see this region's nucleotide sequence