Strain Fitness in Marinobacter adhaerens HP15 around HP15_3908

Experiment: m.b. Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3907 and HP15_3908 are separated by 110 nucleotidesHP15_3908 and HP15_3909 are separated by 29 nucleotidesHP15_3909 and HP15_3910 are separated by 14 nucleotides HP15_3907: HP15_3907 - sodium/alanine symporter family protein, at 4,136,239 to 4,137,600 _3907 HP15_3908: HP15_3908 - CBS domain protein, at 4,137,711 to 4,138,214 _3908 HP15_3909: HP15_3909 - carboxylesterase, at 4,138,244 to 4,139,086 _3909 HP15_3910: HP15_3910 - metal dependent phosphohydrolase, at 4,139,101 to 4,140,225 _3910 Position (kb) 4137 4138 4139Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4136.792 kb on - strand, within HP15_3907at 4136.808 kb on + strand, within HP15_3907at 4136.918 kb on - strand, within HP15_3907at 4136.970 kb on + strand, within HP15_3907at 4136.978 kb on - strand, within HP15_3907at 4136.997 kb on + strand, within HP15_3907at 4137.095 kb on + strand, within HP15_3907at 4137.212 kb on - strand, within HP15_3907at 4137.250 kb on - strand, within HP15_3907at 4137.270 kb on - strand, within HP15_3907at 4137.391 kb on - strand, within HP15_3907at 4137.545 kb on + strandat 4137.551 kb on + strandat 4137.551 kb on + strandat 4137.559 kb on - strandat 4137.616 kb on - strandat 4137.856 kb on - strand, within HP15_3908at 4137.960 kb on + strand, within HP15_3908at 4137.976 kb on + strand, within HP15_3908at 4137.981 kb on - strand, within HP15_3908at 4138.092 kb on - strand, within HP15_3908at 4138.093 kb on - strand, within HP15_3908at 4138.109 kb on - strand, within HP15_3908at 4138.134 kb on - strand, within HP15_3908at 4138.141 kb on + strand, within HP15_3908at 4138.149 kb on - strand, within HP15_3908at 4138.149 kb on - strand, within HP15_3908at 4138.171 kb on + strandat 4138.209 kb on - strandat 4138.403 kb on + strand, within HP15_3909at 4138.408 kb on + strand, within HP15_3909at 4138.416 kb on - strand, within HP15_3909at 4138.416 kb on - strand, within HP15_3909at 4138.416 kb on - strand, within HP15_3909at 4138.453 kb on - strand, within HP15_3909at 4138.485 kb on + strand, within HP15_3909at 4138.533 kb on - strand, within HP15_3909at 4138.577 kb on + strand, within HP15_3909at 4138.687 kb on + strand, within HP15_3909at 4138.706 kb on + strand, within HP15_3909at 4138.711 kb on + strand, within HP15_3909at 4138.714 kb on - strand, within HP15_3909at 4138.719 kb on - strand, within HP15_3909at 4138.781 kb on - strand, within HP15_3909at 4138.836 kb on + strand, within HP15_3909at 4138.891 kb on - strand, within HP15_3909at 4138.909 kb on - strand, within HP15_3909at 4138.962 kb on + strand, within HP15_3909at 4139.012 kb on + strandat 4139.107 kb on - strandat 4139.107 kb on - strandat 4139.122 kb on - strandat 4139.148 kb on + strandat 4139.207 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol%
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4,136,792 - HP15_3907 0.41 -0.5
4,136,808 + HP15_3907 0.42 +1.3
4,136,918 - HP15_3907 0.50 -0.4
4,136,970 + HP15_3907 0.54 +0.8
4,136,978 - HP15_3907 0.54 -0.4
4,136,997 + HP15_3907 0.56 +0.2
4,137,095 + HP15_3907 0.63 -0.3
4,137,212 - HP15_3907 0.71 +0.6
4,137,250 - HP15_3907 0.74 -0.6
4,137,270 - HP15_3907 0.76 -0.2
4,137,391 - HP15_3907 0.85 +0.1
4,137,545 + -0.3
4,137,551 + -0.1
4,137,551 + -0.1
4,137,559 - -0.2
4,137,616 - -0.6
4,137,856 - HP15_3908 0.29 +0.1
4,137,960 + HP15_3908 0.49 +0.0
4,137,976 + HP15_3908 0.53 -0.1
4,137,981 - HP15_3908 0.54 +1.8
4,138,092 - HP15_3908 0.76 +0.8
4,138,093 - HP15_3908 0.76 +0.5
4,138,109 - HP15_3908 0.79 +0.5
4,138,134 - HP15_3908 0.84 +0.7
4,138,141 + HP15_3908 0.85 +0.4
4,138,149 - HP15_3908 0.87 -0.2
4,138,149 - HP15_3908 0.87 -0.2
4,138,171 + +0.1
4,138,209 - +0.8
4,138,403 + HP15_3909 0.19 +0.3
4,138,408 + HP15_3909 0.19 -1.7
4,138,416 - HP15_3909 0.20 -0.5
4,138,416 - HP15_3909 0.20 -2.2
4,138,416 - HP15_3909 0.20 +0.1
4,138,453 - HP15_3909 0.25 -0.2
4,138,485 + HP15_3909 0.29 -0.6
4,138,533 - HP15_3909 0.34 -0.6
4,138,577 + HP15_3909 0.40 -0.6
4,138,687 + HP15_3909 0.53 -0.5
4,138,706 + HP15_3909 0.55 +0.1
4,138,711 + HP15_3909 0.55 -0.5
4,138,714 - HP15_3909 0.56 -0.4
4,138,719 - HP15_3909 0.56 -0.1
4,138,781 - HP15_3909 0.64 +0.1
4,138,836 + HP15_3909 0.70 -1.0
4,138,891 - HP15_3909 0.77 +2.1
4,138,909 - HP15_3909 0.79 -0.7
4,138,962 + HP15_3909 0.85 +1.6
4,139,012 + -2.9
4,139,107 - +1.1
4,139,107 - +1.2
4,139,122 - +0.8
4,139,148 + -0.6
4,139,207 + +0.2

Or see this region's nucleotide sequence