Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3905 and HP15_3906 are separated by 78 nucleotides HP15_3906 and HP15_3907 are separated by 122 nucleotides
HP15_3905: HP15_3905 - lipoprotein, YaeC family, at 4,134,602 to 4,135,384
_3905
HP15_3906: HP15_3906 - protein containing alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen / peroxiredoxin, C-terminal, at 4,135,463 to 4,136,116
_3906
HP15_3907: HP15_3907 - sodium/alanine symporter family protein, at 4,136,239 to 4,137,600
_3907
Position (kb) 4135
4136
4137 Strain fitness (log2 ratio) -2
-1
0
1 at 4134.841 kb on + strand, within HP15_3905 at 4134.886 kb on - strand at 4134.910 kb on + strand, within HP15_3905 at 4134.986 kb on + strand, within HP15_3905 at 4135.081 kb on - strand, within HP15_3905 at 4135.137 kb on + strand, within HP15_3905 at 4135.158 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.204 kb on - strand, within HP15_3905 at 4135.247 kb on + strand, within HP15_3905 at 4135.362 kb on - strand at 4135.521 kb on + strand at 4135.521 kb on + strand at 4135.583 kb on + strand, within HP15_3906 at 4135.697 kb on - strand, within HP15_3906 at 4135.756 kb on + strand, within HP15_3906 at 4135.756 kb on + strand, within HP15_3906 at 4135.764 kb on - strand, within HP15_3906 at 4135.764 kb on - strand, within HP15_3906 at 4135.764 kb on - strand, within HP15_3906 at 4135.764 kb on - strand, within HP15_3906 at 4135.850 kb on + strand, within HP15_3906 at 4135.858 kb on - strand, within HP15_3906 at 4135.858 kb on - strand, within HP15_3906 at 4135.900 kb on + strand, within HP15_3906 at 4135.900 kb on + strand, within HP15_3906 at 4136.075 kb on - strand at 4136.126 kb on + strand at 4136.134 kb on - strand at 4136.139 kb on - strand at 4136.215 kb on - strand at 4136.245 kb on - strand at 4136.245 kb on - strand at 4136.245 kb on - strand at 4136.300 kb on - strand at 4136.300 kb on - strand at 4136.374 kb on + strand at 4136.474 kb on + strand, within HP15_3907 at 4136.482 kb on - strand, within HP15_3907 at 4136.488 kb on + strand, within HP15_3907 at 4136.488 kb on + strand, within HP15_3907 at 4136.529 kb on + strand, within HP15_3907 at 4136.578 kb on + strand, within HP15_3907 at 4136.586 kb on - strand, within HP15_3907 at 4136.586 kb on - strand, within HP15_3907 at 4136.792 kb on - strand, within HP15_3907 at 4136.808 kb on + strand, within HP15_3907 at 4136.918 kb on - strand, within HP15_3907 at 4136.970 kb on + strand, within HP15_3907 at 4136.978 kb on - strand, within HP15_3907 at 4136.997 kb on + strand, within HP15_3907 at 4137.095 kb on + strand, within HP15_3907
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 4,134,841 + HP15_3905 0.31 +0.0 4,134,886 - +0.0 4,134,910 + HP15_3905 0.39 -2.1 4,134,986 + HP15_3905 0.49 -1.8 4,135,081 - HP15_3905 0.61 +0.0 4,135,137 + HP15_3905 0.68 -0.3 4,135,158 + HP15_3905 0.71 +0.5 4,135,197 + HP15_3905 0.76 -0.3 4,135,197 + HP15_3905 0.76 -0.3 4,135,204 - HP15_3905 0.77 -0.3 4,135,247 + HP15_3905 0.82 -0.7 4,135,362 - -0.9 4,135,521 + +1.0 4,135,521 + +0.1 4,135,583 + HP15_3906 0.18 +0.7 4,135,697 - HP15_3906 0.36 -0.4 4,135,756 + HP15_3906 0.45 -0.4 4,135,756 + HP15_3906 0.45 +0.3 4,135,764 - HP15_3906 0.46 -0.0 4,135,764 - HP15_3906 0.46 -0.2 4,135,764 - HP15_3906 0.46 +0.7 4,135,764 - HP15_3906 0.46 -1.0 4,135,850 + HP15_3906 0.59 -0.5 4,135,858 - HP15_3906 0.60 -0.5 4,135,858 - HP15_3906 0.60 -0.7 4,135,900 + HP15_3906 0.67 -1.4 4,135,900 + HP15_3906 0.67 -0.6 4,136,075 - -0.4 4,136,126 + -0.2 4,136,134 - +0.9 4,136,139 - -0.8 4,136,215 - -0.1 4,136,245 - +0.9 4,136,245 - +0.0 4,136,245 - +0.9 4,136,300 - -2.3 4,136,300 - -0.9 4,136,374 + +0.2 4,136,474 + HP15_3907 0.17 -0.7 4,136,482 - HP15_3907 0.18 -0.6 4,136,488 + HP15_3907 0.18 -0.2 4,136,488 + HP15_3907 0.18 +0.1 4,136,529 + HP15_3907 0.21 +0.9 4,136,578 + HP15_3907 0.25 -0.5 4,136,586 - HP15_3907 0.25 -0.0 4,136,586 - HP15_3907 0.25 -0.1 4,136,792 - HP15_3907 0.41 -0.5 4,136,808 + HP15_3907 0.42 +1.3 4,136,918 - HP15_3907 0.50 -0.4 4,136,970 + HP15_3907 0.54 +0.8 4,136,978 - HP15_3907 0.54 -0.4 4,136,997 + HP15_3907 0.56 +0.2 4,137,095 + HP15_3907 0.63 -0.3
Or see this region's nucleotide sequence