Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3610 and HP15_3611 are separated by 290 nucleotides HP15_3611 and HP15_3612 are separated by 0 nucleotides
HP15_3610: HP15_3610 - lipid A biosynthesis lauroyl acyltransferase, at 3,805,822 to 3,806,640
_3610
HP15_3611: HP15_3611 - transglycosylase, Slt family protein, at 3,806,931 to 3,808,301
_3611
HP15_3612: HP15_3612 - monooxygenase, flavin-binding family protein, at 3,808,302 to 3,809,828
_3612
Position (kb)
3806
3807
3808
3809 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3806.067 kb on + strand, within HP15_3610 at 3806.149 kb on + strand, within HP15_3610 at 3806.152 kb on - strand, within HP15_3610 at 3806.188 kb on + strand, within HP15_3610 at 3806.191 kb on - strand, within HP15_3610 at 3806.196 kb on - strand, within HP15_3610 at 3806.387 kb on + strand, within HP15_3610 at 3806.402 kb on + strand, within HP15_3610 at 3806.403 kb on - strand, within HP15_3610 at 3806.404 kb on + strand, within HP15_3610 at 3806.405 kb on - strand, within HP15_3610 at 3806.460 kb on - strand, within HP15_3610 at 3806.545 kb on + strand, within HP15_3610 at 3806.636 kb on - strand at 3806.894 kb on - strand at 3807.037 kb on - strand at 3807.129 kb on - strand, within HP15_3611 at 3807.145 kb on - strand, within HP15_3611 at 3807.242 kb on - strand, within HP15_3611 at 3807.299 kb on - strand, within HP15_3611 at 3807.360 kb on + strand, within HP15_3611 at 3807.475 kb on + strand, within HP15_3611 at 3807.518 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.600 kb on - strand, within HP15_3611 at 3807.600 kb on - strand, within HP15_3611 at 3807.658 kb on + strand, within HP15_3611 at 3807.694 kb on + strand, within HP15_3611 at 3807.702 kb on - strand, within HP15_3611 at 3807.782 kb on - strand, within HP15_3611 at 3807.919 kb on + strand, within HP15_3611 at 3807.924 kb on + strand, within HP15_3611 at 3808.111 kb on + strand, within HP15_3611 at 3808.157 kb on + strand, within HP15_3611 at 3808.157 kb on + strand, within HP15_3611 at 3808.186 kb on - strand at 3808.218 kb on + strand at 3808.306 kb on + strand at 3808.314 kb on - strand at 3808.314 kb on - strand at 3808.318 kb on + strand at 3808.319 kb on - strand at 3808.368 kb on + strand at 3808.423 kb on + strand at 3808.423 kb on + strand at 3808.423 kb on + strand at 3808.423 kb on + strand at 3808.423 kb on + strand at 3808.429 kb on - strand at 3808.431 kb on - strand at 3808.431 kb on - strand at 3808.431 kb on - strand at 3808.554 kb on + strand, within HP15_3612 at 3808.696 kb on - strand, within HP15_3612 at 3808.791 kb on + strand, within HP15_3612 at 3808.799 kb on - strand, within HP15_3612 at 3808.958 kb on - strand, within HP15_3612 at 3808.966 kb on + strand, within HP15_3612 at 3809.001 kb on + strand, within HP15_3612 at 3809.003 kb on + strand, within HP15_3612 at 3809.009 kb on - strand, within HP15_3612 at 3809.158 kb on - strand, within HP15_3612 at 3809.178 kb on - strand, within HP15_3612 at 3809.297 kb on - strand, within HP15_3612
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 3,806,067 + HP15_3610 0.30 -0.2 3,806,149 + HP15_3610 0.40 +0.1 3,806,152 - HP15_3610 0.40 +0.2 3,806,188 + HP15_3610 0.45 +0.1 3,806,191 - HP15_3610 0.45 +1.1 3,806,196 - HP15_3610 0.46 +0.1 3,806,387 + HP15_3610 0.69 -0.4 3,806,402 + HP15_3610 0.71 -0.1 3,806,403 - HP15_3610 0.71 -1.4 3,806,404 + HP15_3610 0.71 +1.4 3,806,405 - HP15_3610 0.71 +0.2 3,806,460 - HP15_3610 0.78 +0.2 3,806,545 + HP15_3610 0.88 +1.0 3,806,636 - -0.2 3,806,894 - -0.7 3,807,037 - +1.3 3,807,129 - HP15_3611 0.14 +0.3 3,807,145 - HP15_3611 0.16 -0.2 3,807,242 - HP15_3611 0.23 +2.1 3,807,299 - HP15_3611 0.27 +0.7 3,807,360 + HP15_3611 0.31 +1.2 3,807,475 + HP15_3611 0.40 -0.4 3,807,518 + HP15_3611 0.43 -0.4 3,807,592 + HP15_3611 0.48 +0.4 3,807,592 + HP15_3611 0.48 +0.4 3,807,592 + HP15_3611 0.48 +0.2 3,807,600 - HP15_3611 0.49 -0.1 3,807,600 - HP15_3611 0.49 +1.3 3,807,658 + HP15_3611 0.53 +0.7 3,807,694 + HP15_3611 0.56 -0.4 3,807,702 - HP15_3611 0.56 +0.7 3,807,782 - HP15_3611 0.62 -0.2 3,807,919 + HP15_3611 0.72 -0.5 3,807,924 + HP15_3611 0.72 +0.3 3,808,111 + HP15_3611 0.86 -0.4 3,808,157 + HP15_3611 0.89 +0.5 3,808,157 + HP15_3611 0.89 +0.4 3,808,186 - +0.2 3,808,218 + +0.3 3,808,306 + -0.6 3,808,314 - -0.7 3,808,314 - +3.5 3,808,318 + +0.3 3,808,319 - +0.1 3,808,368 + -0.3 3,808,423 + +0.6 3,808,423 + +1.1 3,808,423 + -0.5 3,808,423 + +1.2 3,808,423 + -0.9 3,808,429 - -0.4 3,808,431 - +0.5 3,808,431 - +1.1 3,808,431 - -0.4 3,808,554 + HP15_3612 0.17 -0.2 3,808,696 - HP15_3612 0.26 -1.2 3,808,791 + HP15_3612 0.32 -1.9 3,808,799 - HP15_3612 0.33 -0.1 3,808,958 - HP15_3612 0.43 -0.8 3,808,966 + HP15_3612 0.43 -0.2 3,809,001 + HP15_3612 0.46 -0.2 3,809,003 + HP15_3612 0.46 -0.8 3,809,009 - HP15_3612 0.46 -0.1 3,809,158 - HP15_3612 0.56 +0.1 3,809,178 - HP15_3612 0.57 -0.9 3,809,297 - HP15_3612 0.65 -0.7
Or see this region's nucleotide sequence