Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3543 and HP15_3544 are separated by 102 nucleotides
HP15_3543: HP15_3543 - amidase signature enzyme, at 3,730,453 to 3,731,865
_3543
HP15_3544: HP15_3544 - transcriptional regulator, GntR family, at 3,731,968 to 3,733,023
_3544
Position (kb)
3731
3732
3733
3734 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3731.000 kb on + strand, within HP15_3543 at 3731.133 kb on + strand, within HP15_3543 at 3731.170 kb on + strand, within HP15_3543 at 3731.170 kb on + strand, within HP15_3543 at 3731.170 kb on + strand at 3731.170 kb on + strand, within HP15_3543 at 3731.178 kb on - strand, within HP15_3543 at 3731.178 kb on - strand, within HP15_3543 at 3731.178 kb on - strand, within HP15_3543 at 3731.233 kb on + strand, within HP15_3543 at 3731.238 kb on + strand, within HP15_3543 at 3731.241 kb on - strand, within HP15_3543 at 3731.241 kb on - strand, within HP15_3543 at 3731.266 kb on - strand, within HP15_3543 at 3731.296 kb on - strand, within HP15_3543 at 3731.304 kb on + strand, within HP15_3543 at 3731.323 kb on - strand, within HP15_3543 at 3731.340 kb on + strand, within HP15_3543 at 3731.340 kb on + strand, within HP15_3543 at 3731.347 kb on + strand, within HP15_3543 at 3731.520 kb on - strand, within HP15_3543 at 3731.730 kb on - strand at 3731.964 kb on - strand at 3731.978 kb on + strand at 3731.986 kb on - strand at 3731.986 kb on - strand at 3732.318 kb on - strand, within HP15_3544 at 3732.333 kb on + strand, within HP15_3544 at 3732.341 kb on - strand, within HP15_3544 at 3732.372 kb on - strand, within HP15_3544 at 3732.517 kb on - strand, within HP15_3544 at 3732.571 kb on + strand, within HP15_3544 at 3732.629 kb on + strand, within HP15_3544 at 3732.682 kb on - strand, within HP15_3544 at 3732.782 kb on + strand, within HP15_3544 at 3732.894 kb on + strand, within HP15_3544 at 3732.950 kb on - strand at 3732.967 kb on - strand at 3732.974 kb on - strand at 3733.056 kb on + strand at 3733.056 kb on + strand at 3733.056 kb on + strand at 3733.056 kb on + strand at 3733.064 kb on - strand at 3733.064 kb on - strand at 3733.064 kb on - strand at 3733.066 kb on + strand at 3733.066 kb on + strand at 3733.066 kb on + strand at 3733.074 kb on - strand at 3733.074 kb on - strand at 3733.081 kb on - strand at 3733.088 kb on - strand at 3733.088 kb on - strand at 3733.109 kb on + strand at 3733.123 kb on + strand at 3733.131 kb on - strand at 3733.133 kb on - strand at 3733.159 kb on + strand at 3733.167 kb on + strand at 3733.279 kb on + strand at 3733.279 kb on + strand at 3733.279 kb on + strand at 3733.287 kb on - strand at 3733.287 kb on - strand at 3733.421 kb on + strand at 3733.456 kb on - strand at 3733.607 kb on + strand at 3733.610 kb on - strand at 3733.627 kb on + strand at 3733.647 kb on - strand at 3733.733 kb on - strand at 3733.842 kb on - strand at 3733.852 kb on + strand at 3734.010 kb on + strand at 3734.019 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 3,731,000 + HP15_3543 0.39 -0.0 3,731,133 + HP15_3543 0.48 +0.3 3,731,170 + HP15_3543 0.51 -0.4 3,731,170 + HP15_3543 0.51 +0.2 3,731,170 + +0.1 3,731,170 + HP15_3543 0.51 -0.9 3,731,178 - HP15_3543 0.51 +0.1 3,731,178 - HP15_3543 0.51 +0.4 3,731,178 - HP15_3543 0.51 +0.1 3,731,233 + HP15_3543 0.55 +0.1 3,731,238 + HP15_3543 0.56 -0.3 3,731,241 - HP15_3543 0.56 +0.1 3,731,241 - HP15_3543 0.56 +1.1 3,731,266 - HP15_3543 0.58 -0.3 3,731,296 - HP15_3543 0.60 +2.1 3,731,304 + HP15_3543 0.60 -0.9 3,731,323 - HP15_3543 0.62 +1.5 3,731,340 + HP15_3543 0.63 -0.4 3,731,340 + HP15_3543 0.63 +0.5 3,731,347 + HP15_3543 0.63 +0.0 3,731,520 - HP15_3543 0.76 +0.3 3,731,730 - +0.7 3,731,964 - -1.1 3,731,978 + -0.1 3,731,986 - -0.7 3,731,986 - -0.1 3,732,318 - HP15_3544 0.33 -2.3 3,732,333 + HP15_3544 0.35 -1.5 3,732,341 - HP15_3544 0.35 -1.9 3,732,372 - HP15_3544 0.38 -2.4 3,732,517 - HP15_3544 0.52 -2.5 3,732,571 + HP15_3544 0.57 -1.3 3,732,629 + HP15_3544 0.63 -2.8 3,732,682 - HP15_3544 0.68 -1.3 3,732,782 + HP15_3544 0.77 -2.0 3,732,894 + HP15_3544 0.88 -4.1 3,732,950 - -3.1 3,732,967 - -2.9 3,732,974 - -3.6 3,733,056 + -0.4 3,733,056 + +0.2 3,733,056 + +0.2 3,733,056 + -0.8 3,733,064 - -0.6 3,733,064 - +0.5 3,733,064 - +0.3 3,733,066 + -1.3 3,733,066 + +0.1 3,733,066 + +0.4 3,733,074 - -0.1 3,733,074 - +2.1 3,733,081 - -0.1 3,733,088 - +0.2 3,733,088 - -0.2 3,733,109 + +0.1 3,733,123 + +0.5 3,733,131 - -0.1 3,733,133 - -1.3 3,733,159 + -0.2 3,733,167 + -0.4 3,733,279 + +0.2 3,733,279 + -0.2 3,733,279 + -0.1 3,733,287 - -0.7 3,733,287 - +1.1 3,733,421 + -0.2 3,733,456 - -0.1 3,733,607 + -0.1 3,733,610 - -0.4 3,733,627 + +0.0 3,733,647 - -0.2 3,733,733 - -0.1 3,733,842 - -0.1 3,733,852 + +0.6 3,734,010 + +1.1 3,734,019 + +0.1
Or see this region's nucleotide sequence