Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2099 and HP15_2100 are separated by 6 nucleotides HP15_2100 and HP15_2101 are separated by 187 nucleotides
HP15_2099: HP15_2099 - DEAD/DEAH box helicase domain protein, at 2,198,259 to 2,199,542
_2099
HP15_2100: HP15_2100 - transporting ATPase, at 2,199,549 to 2,200,103
_2100
HP15_2101: HP15_2101 - membrane protein containing cytochrome c assembly protein, transmembrane region domain, at 2,200,291 to 2,202,186
_2101
Position (kb)
2199
2200
2201 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2198.604 kb on + strand, within HP15_2099 at 2198.628 kb on - strand, within HP15_2099 at 2198.638 kb on + strand, within HP15_2099 at 2198.638 kb on - strand, within HP15_2099 at 2198.646 kb on - strand, within HP15_2099 at 2198.732 kb on - strand, within HP15_2099 at 2198.801 kb on + strand, within HP15_2099 at 2198.910 kb on + strand, within HP15_2099 at 2198.910 kb on - strand, within HP15_2099 at 2198.930 kb on + strand, within HP15_2099 at 2199.110 kb on - strand, within HP15_2099 at 2199.373 kb on + strand, within HP15_2099 at 2199.373 kb on + strand, within HP15_2099 at 2199.409 kb on + strand, within HP15_2099 at 2199.409 kb on + strand, within HP15_2099 at 2199.429 kb on + strand at 2199.429 kb on - strand at 2199.538 kb on - strand at 2199.577 kb on + strand at 2199.703 kb on - strand, within HP15_2100 at 2199.751 kb on - strand, within HP15_2100 at 2199.829 kb on + strand, within HP15_2100 at 2199.884 kb on + strand, within HP15_2100 at 2199.894 kb on + strand, within HP15_2100 at 2200.032 kb on + strand, within HP15_2100 at 2200.064 kb on - strand at 2200.202 kb on - strand at 2200.258 kb on - strand at 2200.467 kb on + strand at 2200.539 kb on - strand, within HP15_2101 at 2200.922 kb on - strand, within HP15_2101
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 2,198,604 + HP15_2099 0.27 -0.6 2,198,628 - HP15_2099 0.29 +0.2 2,198,638 + HP15_2099 0.30 +0.5 2,198,638 - HP15_2099 0.30 -0.6 2,198,646 - HP15_2099 0.30 -0.2 2,198,732 - HP15_2099 0.37 +0.1 2,198,801 + HP15_2099 0.42 +0.3 2,198,910 + HP15_2099 0.51 -1.0 2,198,910 - HP15_2099 0.51 +2.8 2,198,930 + HP15_2099 0.52 -0.6 2,199,110 - HP15_2099 0.66 +0.1 2,199,373 + HP15_2099 0.87 -0.4 2,199,373 + HP15_2099 0.87 -0.7 2,199,409 + HP15_2099 0.90 +2.2 2,199,409 + HP15_2099 0.90 +1.0 2,199,429 + +0.4 2,199,429 - -0.4 2,199,538 - -0.3 2,199,577 + +0.4 2,199,703 - HP15_2100 0.28 -0.5 2,199,751 - HP15_2100 0.36 +1.2 2,199,829 + HP15_2100 0.50 +0.8 2,199,884 + HP15_2100 0.60 +1.3 2,199,894 + HP15_2100 0.62 +1.1 2,200,032 + HP15_2100 0.87 -0.0 2,200,064 - -0.9 2,200,202 - +2.5 2,200,258 - -0.1 2,200,467 + -0.6 2,200,539 - HP15_2101 0.13 +2.0 2,200,922 - HP15_2101 0.33 +0.2
Or see this region's nucleotide sequence