Strain Fitness in Marinobacter adhaerens HP15 around HP15_1739

Experiment: m.b. Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1737 and HP15_1738 are separated by 170 nucleotidesHP15_1738 and HP15_1739 are separated by 38 nucleotidesHP15_1739 and HP15_1740 are separated by 53 nucleotidesHP15_1740 and HP15_1741 are separated by 38 nucleotides HP15_1737: HP15_1737 - enoyl-CoA hydratase/isomerase, at 1,835,285 to 1,836,106 _1737 HP15_1738: HP15_1738 - hypothetical protein, at 1,836,277 to 1,836,408 _1738 HP15_1739: HP15_1739 - membrane protein containing DUF6, transmembrane, at 1,836,447 to 1,837,325 _1739 HP15_1740: HP15_1740 - enoyl-CoA hydratase/isomerase, at 1,837,379 to 1,838,182 _1740 HP15_1741: HP15_1741 - hypothetical protein, at 1,838,221 to 1,838,583 _1741 Position (kb) 1836 1837 1838Strain fitness (log2 ratio) -1 0 1 2at 1835.535 kb on + strand, within HP15_1737at 1835.536 kb on + strand, within HP15_1737at 1835.562 kb on + strand, within HP15_1737at 1835.635 kb on + strand, within HP15_1737at 1835.640 kb on + strand, within HP15_1737at 1835.640 kb on + strand, within HP15_1737at 1835.643 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.704 kb on + strand, within HP15_1737at 1835.877 kb on - strand, within HP15_1737at 1835.953 kb on + strand, within HP15_1737at 1836.055 kb on + strandat 1836.140 kb on - strandat 1836.145 kb on + strandat 1836.399 kb on - strandat 1836.419 kb on + strandat 1836.422 kb on - strandat 1836.478 kb on + strandat 1836.606 kb on + strand, within HP15_1739at 1836.657 kb on + strand, within HP15_1739at 1836.665 kb on - strand, within HP15_1739at 1836.665 kb on - strand, within HP15_1739at 1836.677 kb on - strand, within HP15_1739at 1836.818 kb on - strand, within HP15_1739at 1836.836 kb on - strand, within HP15_1739at 1836.896 kb on - strand, within HP15_1739at 1836.938 kb on + strand, within HP15_1739at 1836.981 kb on + strand, within HP15_1739at 1837.025 kb on + strand, within HP15_1739at 1837.033 kb on - strand, within HP15_1739at 1837.033 kb on - strand, within HP15_1739at 1837.033 kb on - strand, within HP15_1739at 1837.033 kb on - strand, within HP15_1739at 1837.084 kb on - strand, within HP15_1739at 1837.084 kb on - strand, within HP15_1739at 1837.333 kb on - strandat 1837.442 kb on + strandat 1837.487 kb on - strand, within HP15_1740at 1837.487 kb on - strand, within HP15_1740at 1837.518 kb on + strand, within HP15_1740at 1837.781 kb on + strand, within HP15_1740at 1837.789 kb on - strand, within HP15_1740at 1837.789 kb on - strand, within HP15_1740at 1837.819 kb on + strand, within HP15_1740at 1837.820 kb on - strand, within HP15_1740at 1837.890 kb on + strand, within HP15_1740at 1837.954 kb on - strand, within HP15_1740at 1838.075 kb on - strand, within HP15_1740at 1838.075 kb on - strand, within HP15_1740at 1838.112 kb on - strandat 1838.127 kb on + strandat 1838.135 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol%
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1,835,535 + HP15_1737 0.30 +0.4
1,835,536 + HP15_1737 0.31 -0.8
1,835,562 + HP15_1737 0.34 +0.5
1,835,635 + HP15_1737 0.43 -0.4
1,835,640 + HP15_1737 0.43 +1.9
1,835,640 + HP15_1737 0.43 +2.7
1,835,643 - HP15_1737 0.44 +0.6
1,835,648 - HP15_1737 0.44 -0.1
1,835,648 - HP15_1737 0.44 -0.1
1,835,648 - HP15_1737 0.44 -0.3
1,835,704 + HP15_1737 0.51 +0.2
1,835,877 - HP15_1737 0.72 +1.4
1,835,953 + HP15_1737 0.81 +2.1
1,836,055 + +1.6
1,836,140 - +1.5
1,836,145 + +0.1
1,836,399 - +0.3
1,836,419 + -1.0
1,836,422 - +0.0
1,836,478 + +0.3
1,836,606 + HP15_1739 0.18 -0.2
1,836,657 + HP15_1739 0.24 +0.2
1,836,665 - HP15_1739 0.25 +0.7
1,836,665 - HP15_1739 0.25 +1.0
1,836,677 - HP15_1739 0.26 +0.8
1,836,818 - HP15_1739 0.42 -0.5
1,836,836 - HP15_1739 0.44 -1.4
1,836,896 - HP15_1739 0.51 +1.5
1,836,938 + HP15_1739 0.56 +0.0
1,836,981 + HP15_1739 0.61 -0.1
1,837,025 + HP15_1739 0.66 -1.7
1,837,033 - HP15_1739 0.67 +2.1
1,837,033 - HP15_1739 0.67 +0.8
1,837,033 - HP15_1739 0.67 +1.0
1,837,033 - HP15_1739 0.67 +0.2
1,837,084 - HP15_1739 0.72 -0.7
1,837,084 - HP15_1739 0.72 +0.5
1,837,333 - -0.6
1,837,442 + +1.1
1,837,487 - HP15_1740 0.13 +0.6
1,837,487 - HP15_1740 0.13 +0.5
1,837,518 + HP15_1740 0.17 +0.0
1,837,781 + HP15_1740 0.50 +0.1
1,837,789 - HP15_1740 0.51 +0.2
1,837,789 - HP15_1740 0.51 +0.3
1,837,819 + HP15_1740 0.55 +1.4
1,837,820 - HP15_1740 0.55 +0.4
1,837,890 + HP15_1740 0.64 -0.7
1,837,954 - HP15_1740 0.72 +0.9
1,838,075 - HP15_1740 0.87 +0.1
1,838,075 - HP15_1740 0.87 +0.4
1,838,112 - -0.5
1,838,127 + +1.2
1,838,135 - +1.5

Or see this region's nucleotide sequence