Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1553 and HP15_1554 are separated by 66 nucleotides HP15_1554 and HP15_tRNA30 are separated by 205 nucleotides HP15_tRNA30 and HP15_1555 are separated by 77 nucleotides HP15_1555 and HP15_1556 are separated by 28 nucleotides
HP15_1553: HP15_1553 - transcription negative regulator, at 1,635,277 to 1,635,936
_1553
HP15_1554: HP15_1554 - hydrolase, isochorismatase family, at 1,636,003 to 1,636,533
_1554
HP15_tRNA30: HP15_tRNA30 - tRNA-Ser, at 1,636,739 to 1,636,829
_tRNA30
HP15_1555: HP15_1555 - protein containing DUF938, at 1,636,907 to 1,637,509
_1555
HP15_1556: HP15_1556 - conserved hypothetical protein, at 1,637,538 to 1,638,131
_1556
Position (kb) 1636
1637 Strain fitness (log2 ratio) -1
0
1
2
3 at 1635.796 kb on - strand, within HP15_1553 at 1635.806 kb on - strand, within HP15_1553 at 1635.943 kb on + strand at 1636.022 kb on - strand at 1636.091 kb on - strand, within HP15_1554 at 1636.205 kb on - strand, within HP15_1554 at 1636.380 kb on + strand, within HP15_1554 at 1636.388 kb on - strand, within HP15_1554 at 1636.441 kb on + strand, within HP15_1554 at 1636.887 kb on - strand at 1637.040 kb on - strand, within HP15_1555 at 1637.075 kb on + strand, within HP15_1555 at 1637.124 kb on + strand, within HP15_1555 at 1637.132 kb on - strand, within HP15_1555 at 1637.260 kb on - strand, within HP15_1555 at 1637.285 kb on - strand, within HP15_1555 at 1637.365 kb on - strand, within HP15_1555 at 1637.382 kb on - strand, within HP15_1555 at 1637.384 kb on + strand, within HP15_1555 at 1637.392 kb on - strand, within HP15_1555 at 1637.581 kb on - strand at 1637.609 kb on - strand, within HP15_1556 at 1637.715 kb on + strand, within HP15_1556 at 1637.733 kb on - strand, within HP15_1556 at 1637.806 kb on + strand, within HP15_1556 at 1637.812 kb on - strand, within HP15_1556
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 1,635,796 - HP15_1553 0.79 +0.9 1,635,806 - HP15_1553 0.80 -0.0 1,635,943 + -0.0 1,636,022 - -0.1 1,636,091 - HP15_1554 0.17 +0.8 1,636,205 - HP15_1554 0.38 +0.1 1,636,380 + HP15_1554 0.71 +1.0 1,636,388 - HP15_1554 0.73 +2.9 1,636,441 + HP15_1554 0.82 +1.4 1,636,887 - -0.8 1,637,040 - HP15_1555 0.22 -1.0 1,637,075 + HP15_1555 0.28 +1.6 1,637,124 + HP15_1555 0.36 +0.2 1,637,132 - HP15_1555 0.37 +0.6 1,637,260 - HP15_1555 0.59 -0.6 1,637,285 - HP15_1555 0.63 +1.2 1,637,365 - HP15_1555 0.76 -1.0 1,637,382 - HP15_1555 0.79 +0.5 1,637,384 + HP15_1555 0.79 -0.7 1,637,392 - HP15_1555 0.80 -0.0 1,637,581 - -0.1 1,637,609 - HP15_1556 0.12 +0.0 1,637,715 + HP15_1556 0.30 +1.3 1,637,733 - HP15_1556 0.33 +1.9 1,637,806 + HP15_1556 0.45 -0.2 1,637,812 - HP15_1556 0.46 +0.4
Or see this region's nucleotide sequence