Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1251 and HP15_1252 are separated by 6 nucleotides HP15_1252 and HP15_1253 are separated by 213 nucleotides HP15_1253 and HP15_1254 are separated by 16 nucleotides
HP15_1251: HP15_1251 - large component of pyruvate transporter (actP-like) (from data) , at 1,310,720 to 1,312,486
_1251
HP15_1252: HP15_1252 - small component of pyruvate transporter (TIGR03647) (from data) , at 1,312,493 to 1,312,759
_1252
HP15_1253: HP15_1253 - DNA polymerase III, epsilon subunit, at 1,312,973 to 1,313,680
_1253
HP15_1254: HP15_1254 - cyclic nucleotide-binding domain (cNMP-BD) protein, at 1,313,697 to 1,315,613
_1254
Position (kb)
1312
1313
1314 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1312.019 kb on + strand, within HP15_1251 at 1312.032 kb on + strand, within HP15_1251 at 1312.068 kb on - strand, within HP15_1251 at 1312.114 kb on - strand, within HP15_1251 at 1312.383 kb on + strand at 1312.393 kb on - strand at 1312.401 kb on + strand at 1312.431 kb on + strand at 1312.581 kb on - strand, within HP15_1252 at 1312.601 kb on + strand, within HP15_1252 at 1312.750 kb on - strand at 1312.750 kb on - strand at 1312.917 kb on - strand at 1312.917 kb on - strand at 1312.917 kb on - strand at 1312.917 kb on - strand at 1312.998 kb on + strand at 1313.077 kb on + strand, within HP15_1253 at 1313.139 kb on - strand, within HP15_1253 at 1313.159 kb on + strand, within HP15_1253 at 1313.167 kb on - strand, within HP15_1253 at 1313.186 kb on - strand, within HP15_1253 at 1313.186 kb on - strand, within HP15_1253 at 1313.186 kb on - strand, within HP15_1253 at 1313.441 kb on - strand, within HP15_1253 at 1313.533 kb on - strand, within HP15_1253 at 1313.821 kb on + strand at 1313.878 kb on - strand at 1313.900 kb on - strand, within HP15_1254 at 1313.950 kb on - strand, within HP15_1254 at 1314.132 kb on - strand, within HP15_1254 at 1314.248 kb on - strand, within HP15_1254 at 1314.248 kb on - strand, within HP15_1254 at 1314.344 kb on + strand, within HP15_1254 at 1314.344 kb on + strand, within HP15_1254 at 1314.344 kb on + strand, within HP15_1254 at 1314.411 kb on - strand, within HP15_1254 at 1314.444 kb on - strand, within HP15_1254 at 1314.474 kb on + strand, within HP15_1254 at 1314.513 kb on + strand, within HP15_1254 at 1314.521 kb on - strand, within HP15_1254 at 1314.521 kb on - strand, within HP15_1254
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 1,312,019 + HP15_1251 0.74 -0.5 1,312,032 + HP15_1251 0.74 +1.4 1,312,068 - HP15_1251 0.76 -0.7 1,312,114 - HP15_1251 0.79 -1.1 1,312,383 + +0.3 1,312,393 - +0.9 1,312,401 + +0.7 1,312,431 + +0.2 1,312,581 - HP15_1252 0.33 -0.1 1,312,601 + HP15_1252 0.40 +1.1 1,312,750 - +0.7 1,312,750 - -0.5 1,312,917 - -0.1 1,312,917 - -0.3 1,312,917 - -0.2 1,312,917 - +0.5 1,312,998 + +1.6 1,313,077 + HP15_1253 0.15 -0.4 1,313,139 - HP15_1253 0.23 -0.2 1,313,159 + HP15_1253 0.26 +0.5 1,313,167 - HP15_1253 0.27 -0.2 1,313,186 - HP15_1253 0.30 +0.4 1,313,186 - HP15_1253 0.30 +1.1 1,313,186 - HP15_1253 0.30 +0.4 1,313,441 - HP15_1253 0.66 +1.9 1,313,533 - HP15_1253 0.79 +0.5 1,313,821 + +2.3 1,313,878 - +1.3 1,313,900 - HP15_1254 0.11 -0.3 1,313,950 - HP15_1254 0.13 -1.1 1,314,132 - HP15_1254 0.23 +0.3 1,314,248 - HP15_1254 0.29 -0.5 1,314,248 - HP15_1254 0.29 -0.8 1,314,344 + HP15_1254 0.34 +0.9 1,314,344 + HP15_1254 0.34 +0.1 1,314,344 + HP15_1254 0.34 -1.6 1,314,411 - HP15_1254 0.37 -2.1 1,314,444 - HP15_1254 0.39 -0.1 1,314,474 + HP15_1254 0.41 +0.7 1,314,513 + HP15_1254 0.43 -1.0 1,314,521 - HP15_1254 0.43 -0.4 1,314,521 - HP15_1254 0.43 -0.1
Or see this region's nucleotide sequence