Strain Fitness in Marinobacter adhaerens HP15 around HP15_1250

Experiment: m.b. Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1249 and HP15_1250 are separated by 53 nucleotidesHP15_1250 and HP15_1251 are separated by 97 nucleotides HP15_1249: HP15_1249 - two-component system sensor protein, at 1,306,544 to 1,310,062 _1249 HP15_1250: HP15_1250 - conserved hypothetical protein, membrane, at 1,310,116 to 1,310,622 _1250 HP15_1251: HP15_1251 - large component of pyruvate transporter (actP-like) (from data), at 1,310,720 to 1,312,486 _1251 Position (kb) 1310 1311Strain fitness (log2 ratio) -3 -2 -1 0 1at 1310.131 kb on - strandat 1310.163 kb on + strandat 1310.163 kb on + strandat 1310.171 kb on - strand, within HP15_1250at 1310.171 kb on - strand, within HP15_1250at 1310.171 kb on - strand, within HP15_1250at 1310.171 kb on - strand, within HP15_1250at 1310.205 kb on - strand, within HP15_1250at 1310.261 kb on + strand, within HP15_1250at 1310.367 kb on - strand, within HP15_1250at 1310.368 kb on - strand, within HP15_1250at 1310.472 kb on - strand, within HP15_1250at 1310.573 kb on - strandat 1310.573 kb on - strandat 1310.601 kb on - strandat 1310.952 kb on + strand, within HP15_1251at 1310.959 kb on - strand, within HP15_1251at 1310.978 kb on + strand, within HP15_1251at 1311.087 kb on - strand, within HP15_1251at 1311.101 kb on + strand, within HP15_1251at 1311.115 kb on + strand, within HP15_1251at 1311.217 kb on + strand, within HP15_1251

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol%
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1,310,131 - -0.2
1,310,163 + -1.1
1,310,163 + -0.1
1,310,171 - HP15_1250 0.11 +0.3
1,310,171 - HP15_1250 0.11 +1.5
1,310,171 - HP15_1250 0.11 +0.6
1,310,171 - HP15_1250 0.11 -0.8
1,310,205 - HP15_1250 0.18 -0.2
1,310,261 + HP15_1250 0.29 -2.9
1,310,367 - HP15_1250 0.50 +0.3
1,310,368 - HP15_1250 0.50 +1.0
1,310,472 - HP15_1250 0.70 -1.5
1,310,573 - +0.2
1,310,573 - -0.1
1,310,601 - +0.1
1,310,952 + HP15_1251 0.13 -2.3
1,310,959 - HP15_1251 0.14 +0.3
1,310,978 + HP15_1251 0.15 -0.9
1,311,087 - HP15_1251 0.21 +0.4
1,311,101 + HP15_1251 0.22 -2.2
1,311,115 + HP15_1251 0.22 -2.4
1,311,217 + HP15_1251 0.28 +0.1

Or see this region's nucleotide sequence