Experiment: m.b. Vanillin 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_921 and HP15_922 overlap by 1 nucleotides HP15_922 and HP15_923 are separated by 173 nucleotides
HP15_921: HP15_921 - alcohol dehydrogenase, zinc-binding domain protein, at 934,962 to 935,918
_921
HP15_922: HP15_922 - proline racemase, at 935,918 to 936,979
_922
HP15_923: HP15_923 - acetyl-coA synthetase/AMP-(fatty) acid ligase, at 937,153 to 938,802
_923
Position (kb) 935
936
937 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 934.936 kb on + strand at 935.009 kb on + strand at 935.024 kb on - strand at 935.054 kb on + strand at 935.311 kb on - strand, within HP15_921 at 935.386 kb on + strand, within HP15_921 at 935.443 kb on + strand, within HP15_921 at 935.454 kb on + strand, within HP15_921 at 935.454 kb on + strand, within HP15_921 at 935.458 kb on - strand, within HP15_921 at 935.477 kb on - strand, within HP15_921 at 935.479 kb on + strand, within HP15_921 at 935.482 kb on - strand, within HP15_921 at 935.487 kb on - strand, within HP15_921 at 935.518 kb on + strand, within HP15_921 at 935.537 kb on - strand, within HP15_921 at 935.602 kb on + strand, within HP15_921 at 935.759 kb on + strand, within HP15_921 at 935.973 kb on + strand at 936.009 kb on + strand at 936.123 kb on - strand, within HP15_922 at 936.300 kb on - strand, within HP15_922 at 936.303 kb on + strand, within HP15_922 at 936.357 kb on + strand, within HP15_922 at 936.438 kb on + strand, within HP15_922 at 936.532 kb on + strand, within HP15_922 at 936.540 kb on - strand, within HP15_922 at 936.826 kb on + strand, within HP15_922 at 936.860 kb on + strand, within HP15_922 at 936.867 kb on - strand, within HP15_922 at 936.872 kb on - strand, within HP15_922 at 936.921 kb on + strand at 936.924 kb on - strand at 937.011 kb on - strand at 937.116 kb on + strand at 937.117 kb on - strand at 937.117 kb on - strand at 937.117 kb on - strand at 937.117 kb on - strand at 937.301 kb on - strand at 937.447 kb on - strand, within HP15_923 at 937.545 kb on + strand, within HP15_923 at 937.583 kb on + strand, within HP15_923 at 937.613 kb on - strand, within HP15_923 at 937.655 kb on + strand, within HP15_923 at 937.772 kb on - strand, within HP15_923 at 937.772 kb on - strand, within HP15_923 at 937.803 kb on - strand, within HP15_923
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vanillin 2.5 mM remove 934,936 + +0.5 935,009 + -1.0 935,024 - -0.5 935,054 + -0.6 935,311 - HP15_921 0.36 +0.1 935,386 + HP15_921 0.44 +0.2 935,443 + HP15_921 0.50 +0.1 935,454 + HP15_921 0.51 +1.8 935,454 + HP15_921 0.51 -0.3 935,458 - HP15_921 0.52 +0.2 935,477 - HP15_921 0.54 +0.4 935,479 + HP15_921 0.54 +0.2 935,482 - HP15_921 0.54 -1.1 935,487 - HP15_921 0.55 -1.0 935,518 + HP15_921 0.58 -0.2 935,537 - HP15_921 0.60 -0.2 935,602 + HP15_921 0.67 -2.5 935,759 + HP15_921 0.83 +1.2 935,973 + +0.6 936,009 + +0.6 936,123 - HP15_922 0.19 -0.8 936,300 - HP15_922 0.36 -1.0 936,303 + HP15_922 0.36 +0.2 936,357 + HP15_922 0.41 +0.2 936,438 + HP15_922 0.49 -0.9 936,532 + HP15_922 0.58 +1.8 936,540 - HP15_922 0.59 -1.5 936,826 + HP15_922 0.85 -0.0 936,860 + HP15_922 0.89 +1.8 936,867 - HP15_922 0.89 +2.1 936,872 - HP15_922 0.90 +1.8 936,921 + +0.1 936,924 - -1.5 937,011 - +2.8 937,116 + +1.0 937,117 - -0.1 937,117 - -0.4 937,117 - +0.2 937,117 - -0.8 937,301 - +0.3 937,447 - HP15_923 0.18 +0.8 937,545 + HP15_923 0.24 -1.5 937,583 + HP15_923 0.26 +2.8 937,613 - HP15_923 0.28 -1.0 937,655 + HP15_923 0.30 +0.1 937,772 - HP15_923 0.38 +0.8 937,772 - HP15_923 0.38 -1.4 937,803 - HP15_923 0.39 -2.4
Or see this region's nucleotide sequence