Experiment: Nickel (II) chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3444 and Psest_3445 overlap by 4 nucleotides Psest_3445 and Psest_3446 overlap by 4 nucleotides Psest_3446 and Psest_3447 are separated by 198 nucleotides
Psest_3444: Psest_3444 - Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs, at 3,614,927 to 3,617,128
_3444
Psest_3445: Psest_3445 - Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs, at 3,617,125 to 3,618,111
_3445
Psest_3446: Psest_3446 - Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs, at 3,618,108 to 3,618,620
_3446
Psest_3447: Psest_3447 - Uncharacterized MobA-related protein, at 3,618,819 to 3,619,409
_3447
Position (kb)
3617
3618
3619 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3616.158 kb on + strand, within Psest_3444 at 3616.158 kb on + strand, within Psest_3444 at 3616.158 kb on + strand, within Psest_3444 at 3616.159 kb on - strand, within Psest_3444 at 3616.389 kb on + strand, within Psest_3444 at 3616.558 kb on + strand, within Psest_3444 at 3616.558 kb on + strand, within Psest_3444 at 3616.559 kb on - strand, within Psest_3444 at 3616.599 kb on + strand, within Psest_3444 at 3616.815 kb on + strand, within Psest_3444 at 3616.816 kb on - strand, within Psest_3444 at 3616.816 kb on - strand, within Psest_3444 at 3616.833 kb on + strand, within Psest_3444 at 3616.878 kb on + strand, within Psest_3444 at 3616.878 kb on + strand, within Psest_3444 at 3617.049 kb on + strand at 3617.408 kb on + strand, within Psest_3445 at 3617.408 kb on + strand, within Psest_3445 at 3617.408 kb on + strand, within Psest_3445 at 3617.408 kb on + strand, within Psest_3445 at 3617.409 kb on - strand, within Psest_3445 at 3617.409 kb on - strand, within Psest_3445 at 3617.409 kb on - strand, within Psest_3445 at 3617.750 kb on + strand, within Psest_3445 at 3617.750 kb on + strand, within Psest_3445 at 3617.750 kb on + strand, within Psest_3445 at 3617.750 kb on + strand, within Psest_3445 at 3617.751 kb on - strand, within Psest_3445 at 3617.751 kb on - strand, within Psest_3445 at 3617.751 kb on - strand, within Psest_3445 at 3617.751 kb on - strand, within Psest_3445 at 3617.756 kb on + strand, within Psest_3445 at 3617.756 kb on + strand, within Psest_3445 at 3617.756 kb on + strand, within Psest_3445 at 3617.756 kb on + strand, within Psest_3445 at 3617.756 kb on + strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.757 kb on - strand, within Psest_3445 at 3617.759 kb on + strand, within Psest_3445 at 3617.759 kb on + strand, within Psest_3445 at 3617.759 kb on + strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3617.760 kb on - strand, within Psest_3445 at 3618.038 kb on + strand at 3618.038 kb on + strand at 3618.039 kb on - strand at 3618.095 kb on + strand at 3618.096 kb on - strand at 3618.253 kb on - strand, within Psest_3446 at 3618.607 kb on + strand at 3618.607 kb on + strand at 3618.608 kb on - strand at 3618.671 kb on + strand at 3618.797 kb on + strand at 3619.000 kb on + strand, within Psest_3447 at 3619.069 kb on + strand, within Psest_3447
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.8 mM remove 3,616,158 + Psest_3444 0.56 -0.8 3,616,158 + Psest_3444 0.56 -2.1 3,616,158 + Psest_3444 0.56 +1.0 3,616,159 - Psest_3444 0.56 +0.5 3,616,389 + Psest_3444 0.66 +1.3 3,616,558 + Psest_3444 0.74 -1.8 3,616,558 + Psest_3444 0.74 +1.0 3,616,559 - Psest_3444 0.74 +0.8 3,616,599 + Psest_3444 0.76 +0.9 3,616,815 + Psest_3444 0.86 -1.2 3,616,816 - Psest_3444 0.86 +0.3 3,616,816 - Psest_3444 0.86 -0.4 3,616,833 + Psest_3444 0.87 +0.4 3,616,878 + Psest_3444 0.89 +0.3 3,616,878 + Psest_3444 0.89 +2.0 3,617,049 + +1.0 3,617,408 + Psest_3445 0.29 +1.6 3,617,408 + Psest_3445 0.29 +0.8 3,617,408 + Psest_3445 0.29 +1.8 3,617,408 + Psest_3445 0.29 -1.0 3,617,409 - Psest_3445 0.29 +1.0 3,617,409 - Psest_3445 0.29 +0.9 3,617,409 - Psest_3445 0.29 +0.7 3,617,750 + Psest_3445 0.63 -0.1 3,617,750 + Psest_3445 0.63 +0.0 3,617,750 + Psest_3445 0.63 +0.2 3,617,750 + Psest_3445 0.63 -0.7 3,617,751 - Psest_3445 0.63 +1.8 3,617,751 - Psest_3445 0.63 +0.3 3,617,751 - Psest_3445 0.63 +0.5 3,617,751 - Psest_3445 0.63 +0.8 3,617,756 + Psest_3445 0.64 +2.6 3,617,756 + Psest_3445 0.64 -1.5 3,617,756 + Psest_3445 0.64 -0.5 3,617,756 + Psest_3445 0.64 +0.2 3,617,756 + Psest_3445 0.64 +0.9 3,617,757 - Psest_3445 0.64 +1.8 3,617,757 - Psest_3445 0.64 +0.5 3,617,757 - Psest_3445 0.64 +0.5 3,617,757 - Psest_3445 0.64 +0.8 3,617,757 - Psest_3445 0.64 +2.0 3,617,757 - Psest_3445 0.64 +1.1 3,617,759 + Psest_3445 0.64 +2.6 3,617,759 + Psest_3445 0.64 +0.0 3,617,759 + Psest_3445 0.64 -1.0 3,617,760 - Psest_3445 0.64 +1.6 3,617,760 - Psest_3445 0.64 -0.1 3,617,760 - Psest_3445 0.64 +1.0 3,617,760 - Psest_3445 0.64 +0.7 3,617,760 - Psest_3445 0.64 +1.0 3,617,760 - Psest_3445 0.64 +2.5 3,617,760 - Psest_3445 0.64 +0.9 3,618,038 + -0.5 3,618,038 + +0.8 3,618,039 - -0.1 3,618,095 + +2.0 3,618,096 - +1.6 3,618,253 - Psest_3446 0.28 +1.0 3,618,607 + +0.5 3,618,607 + -1.5 3,618,608 - +0.7 3,618,671 + +0.0 3,618,797 + +0.0 3,619,000 + Psest_3447 0.31 +0.3 3,619,069 + Psest_3447 0.42 +0.3
Or see this region's nucleotide sequence