Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3221

Experiment: Nickel (II) chloride 0.8 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.8 mM
3,392,438	+		Psest_3219	0.15	+0.6
3,392,438	+		Psest_3219	0.15	-0.6
3,392,438	+		Psest_3219	0.15	-2.1
3,392,439	-		Psest_3219	0.15	+1.6
3,392,439	-		Psest_3219	0.15	+0.1
3,392,440	+		Psest_3219	0.15	+1.0
3,392,440	+		Psest_3219	0.15	-0.7
3,392,441	-		Psest_3219	0.16	-0.4
3,392,441	-		Psest_3219	0.16	-1.5
3,392,441	-		Psest_3219	0.16	-0.5
3,392,582	+		Psest_3219	0.37	+1.4
3,392,582	+		Psest_3219	0.37	+2.3
3,392,583	-		Psest_3219	0.37	+0.2
3,392,583	-		Psest_3219	0.37	-0.7
3,392,583	-		Psest_3219	0.37	+0.3
3,392,583	-		Psest_3219	0.37	-0.2
3,392,671	+		Psest_3219	0.51	+1.2
3,392,672	-		Psest_3219	0.51	+0.4
3,392,672	-		Psest_3219	0.51	+0.5
3,392,672	-		Psest_3219	0.51	-0.1
3,393,012	+				+0.8
3,393,319	+				-1.1
3,393,319	+				-0.9
3,393,320	-				-1.6
3,393,328	+				+1.4
3,393,501	+				-0.1
3,393,501	+				-0.3
3,393,501	+				+0.9
3,393,502	-				+0.2
3,393,502	-				-0.9
3,393,631	+		Psest_3221	0.16	-0.1
3,393,631	+		Psest_3221	0.16	+0.1
3,393,824	+		Psest_3221	0.28	-0.5
3,393,824	+		Psest_3221	0.28	+0.2
3,393,825	-		Psest_3221	0.28	+0.9
3,393,825	-		Psest_3221	0.28	+0.0
3,393,825	-		Psest_3221	0.28	+0.6
3,393,825	-		Psest_3221	0.28	+0.3
3,393,825	-		Psest_3221	0.28	-0.1
3,393,825	-		Psest_3221	0.28	+0.4
3,393,825	-		Psest_3221	0.28	-0.2
3,393,827	+		Psest_3221	0.28	+0.0
3,393,827	+		Psest_3221	0.28	+0.3
3,393,828	-		Psest_3221	0.28	-0.0
3,393,828	-		Psest_3221	0.28	+0.4
3,393,838	-		Psest_3221	0.29	+0.4
3,393,857	-		Psest_3221	0.30	+0.8
3,394,005	+		Psest_3221	0.39	+0.7
3,394,005	+		Psest_3221	0.39	+2.1
3,394,005	+		Psest_3221	0.39	+1.0
3,394,005	+		Psest_3221	0.39	+0.3
3,394,005	+		Psest_3221	0.39	+0.6
3,394,005	+		Psest_3221	0.39	+0.4
3,394,005	+		Psest_3221	0.39	+0.1
3,394,005	+		Psest_3221	0.39	+0.0
3,394,006	-		Psest_3221	0.39	-1.2
3,394,006	-		Psest_3221	0.39	+1.4
3,394,006	-		Psest_3221	0.39	+1.3
3,394,006	-		Psest_3221	0.39	+0.1
3,394,006	-		Psest_3221	0.39	+0.3
3,394,006	-		Psest_3221	0.39	+0.9
3,394,088	+		Psest_3221	0.43	+0.3
3,394,088	+		Psest_3221	0.43	+0.1
3,394,088	+		Psest_3221	0.43	+0.5
3,394,088	+		Psest_3221	0.43	-0.8
3,394,088	+		Psest_3221	0.43	+1.2
3,394,088	+		Psest_3221	0.43	+0.7
3,394,089	-		Psest_3221	0.44	+0.6
3,394,089	-		Psest_3221	0.44	-1.4
3,394,241	+		Psest_3221	0.53	-0.5
3,394,266	-		Psest_3221	0.54	-0.6
3,394,298	+		Psest_3221	0.56	+1.0
3,394,298	+		Psest_3221	0.56	-1.0
3,394,346	+		Psest_3221	0.59	+0.7
3,394,346	+		Psest_3221	0.59	+0.7
3,394,346	+		Psest_3221	0.59	+1.9
3,394,346	+		Psest_3221	0.59	+0.6
3,394,346	+		Psest_3221	0.59	+0.4
3,394,346	+		Psest_3221	0.59	-0.3
3,394,346	+		Psest_3221	0.59	+0.7
3,394,346	+		Psest_3221	0.59	+0.2
3,394,346	+		Psest_3221	0.59	+0.8
3,394,347	-		Psest_3221	0.59	+0.2
3,394,347	-		Psest_3221	0.59	+1.0
3,394,347	-		Psest_3221	0.59	-0.2
3,394,347	-		Psest_3221	0.59	+0.3
3,394,347	-		Psest_3221	0.59	+0.4
3,394,347	-		Psest_3221	0.59	+0.4
3,394,347	-		Psest_3221	0.59	+0.8
3,394,442	+		Psest_3221	0.64	-0.4
3,394,442	+		Psest_3221	0.64	+1.1
3,394,442	+		Psest_3221	0.64	+0.7
3,394,442	+		Psest_3221	0.64	+0.0
3,394,443	-		Psest_3221	0.65	-0.0
3,394,443	-		Psest_3221	0.65	+0.9
3,394,478	+		Psest_3221	0.67	+0.3
3,394,478	+		Psest_3221	0.67	-0.9
3,394,478	+		Psest_3221	0.67	+0.6
3,394,478	+		Psest_3221	0.67	+0.4
3,394,478	+		Psest_3221	0.67	+1.7
3,394,478	+		Psest_3221	0.67	-1.9
3,394,478	+		Psest_3221	0.67	-1.3
3,394,478	+		Psest_3221	0.67	+0.4
3,394,479	-		Psest_3221	0.67	+0.4
3,394,523	+		Psest_3221	0.69	-1.4
3,394,523	+		Psest_3221	0.69	+0.9
3,394,523	+		Psest_3221	0.69	-0.3
3,394,524	-		Psest_3221	0.69	+0.1
3,394,527	+		Psest_3221	0.70	+0.5
3,394,527	+		Psest_3221	0.70	+0.4
3,394,527	+		Psest_3221	0.70	-0.9
3,394,527	+		Psest_3221	0.70	+0.7
3,394,528	-		Psest_3221	0.70	-0.1
3,394,528	-		Psest_3221	0.70	+0.7
3,394,528	-		Psest_3221	0.70	+0.2
3,394,528	-		Psest_3221	0.70	+0.4
3,394,528	-		Psest_3221	0.70	+0.6
3,394,655	+		Psest_3221	0.77	+0.4
3,394,656	-		Psest_3221	0.77	-0.5
3,394,715	+		Psest_3221	0.81	-0.7
3,394,715	+		Psest_3221	0.81	+0.2
3,394,715	+		Psest_3221	0.81	+3.0
3,394,716	-		Psest_3221	0.81	+0.4
3,394,716	-		Psest_3221	0.81	+0.4
3,394,716	-		Psest_3221	0.81	-0.0
3,394,752	+		Psest_3221	0.83	+0.4
3,394,752	+		Psest_3221	0.83	+0.9
3,394,752	+		Psest_3221	0.83	+0.5
3,394,752	+		Psest_3221	0.83	+0.2
3,394,752	+		Psest_3221	0.83	+0.2
3,394,911	-				-1.2
3,394,928	+				-0.8
3,395,000	+				+0.1
3,395,000	+				-0.9
3,395,069	+				+0.4
3,395,069	+				+0.5
3,395,069	+				+1.0
3,395,069	+				+0.9
3,395,070	-				-0.8
3,395,070	-				-0.5
3,395,070	-				-1.0
3,395,070	-				+0.4
3,395,070	-				-0.6
3,395,070	-				-0.2
3,395,082	-				-0.1
3,395,082	-				+0.1
3,395,310	+		Psest_3222	0.26	+0.0
3,395,523	+		Psest_3222	0.60	+0.8
3,395,523	+		Psest_3222	0.60	+0.3
3,395,523	+		Psest_3222	0.60	+0.5
3,395,736	-				-0.3
3,395,736	-				+1.0
3,395,758	+				+1.4
3,395,759	-				+0.8
3,395,772	+				+0.7
3,395,773	-				+2.5