Experiment: Nickel (II) chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2887 and Psest_2888 are separated by 31 nucleotides Psest_2888 and Psest_2889 are separated by 257 nucleotides
Psest_2887: Psest_2887 - Uncharacterized protein conserved in bacteria, at 3,079,184 to 3,080,167
_2887
Psest_2888: Psest_2888 - Transcriptional activator of acetoin/glycerol metabolism, at 3,080,199 to 3,082,088
_2888
Psest_2889: Psest_2889 - Predicted flavoprotein involved in K+ transport, at 3,082,346 to 3,084,226
_2889
Position (kb)
3080
3081
3082
3083 Strain fitness (log2 ratio)
-1
0
1
2 at 3079.448 kb on + strand, within Psest_2887 at 3079.449 kb on - strand, within Psest_2887 at 3079.449 kb on - strand, within Psest_2887 at 3079.449 kb on - strand, within Psest_2887 at 3079.449 kb on - strand, within Psest_2887 at 3079.763 kb on + strand, within Psest_2887 at 3079.956 kb on - strand, within Psest_2887 at 3080.391 kb on + strand, within Psest_2888 at 3080.392 kb on - strand, within Psest_2888 at 3080.629 kb on + strand, within Psest_2888 at 3080.629 kb on + strand, within Psest_2888 at 3080.630 kb on - strand, within Psest_2888 at 3080.630 kb on - strand, within Psest_2888 at 3081.181 kb on + strand, within Psest_2888 at 3081.182 kb on - strand, within Psest_2888 at 3081.182 kb on - strand, within Psest_2888 at 3081.182 kb on - strand, within Psest_2888 at 3081.403 kb on + strand, within Psest_2888 at 3081.403 kb on + strand, within Psest_2888 at 3081.403 kb on + strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3082.176 kb on + strand at 3082.238 kb on + strand at 3082.321 kb on - strand at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.916 kb on + strand, within Psest_2889 at 3082.917 kb on - strand, within Psest_2889 at 3083.087 kb on + strand, within Psest_2889
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.8 mM remove 3,079,448 + Psest_2887 0.27 +0.9 3,079,449 - Psest_2887 0.27 -0.6 3,079,449 - Psest_2887 0.27 -0.4 3,079,449 - Psest_2887 0.27 +1.7 3,079,449 - Psest_2887 0.27 -0.8 3,079,763 + Psest_2887 0.59 +2.6 3,079,956 - Psest_2887 0.78 -0.7 3,080,391 + Psest_2888 0.10 +0.2 3,080,392 - Psest_2888 0.10 +0.2 3,080,629 + Psest_2888 0.23 +0.1 3,080,629 + Psest_2888 0.23 -0.8 3,080,630 - Psest_2888 0.23 +2.0 3,080,630 - Psest_2888 0.23 +0.3 3,081,181 + Psest_2888 0.52 +0.2 3,081,182 - Psest_2888 0.52 -0.1 3,081,182 - Psest_2888 0.52 -1.3 3,081,182 - Psest_2888 0.52 +1.1 3,081,403 + Psest_2888 0.64 +1.3 3,081,403 + Psest_2888 0.64 +0.9 3,081,403 + Psest_2888 0.64 +1.7 3,081,404 - Psest_2888 0.64 +0.0 3,081,404 - Psest_2888 0.64 -0.8 3,081,404 - Psest_2888 0.64 +0.0 3,082,176 + +1.6 3,082,238 + +1.3 3,082,321 - +1.0 3,082,727 + Psest_2889 0.20 +0.3 3,082,727 + Psest_2889 0.20 +0.3 3,082,727 + Psest_2889 0.20 +2.6 3,082,727 + Psest_2889 0.20 +1.0 3,082,916 + Psest_2889 0.30 +0.0 3,082,917 - Psest_2889 0.30 +0.7 3,083,087 + Psest_2889 0.39 +0.0
Or see this region's nucleotide sequence