Experiment: m.b. Vanillin 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1384 and HP15_1385 are separated by 95 nucleotides HP15_1385 and HP15_1386 overlap by 1 nucleotides HP15_1386 and HP15_1387 are separated by 12 nucleotides HP15_1387 and HP15_1388 are separated by 168 nucleotides
HP15_1384: HP15_1384 - lipolytic enzyme, G-D-S-L, at 1,459,300 to 1,459,887
_1384
HP15_1385: HP15_1385 - ABC transporter ATP-binding protein-like protein, at 1,459,983 to 1,460,711
_1385
HP15_1386: HP15_1386 - ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 1,460,711 to 1,463,197
_1386
HP15_1387: HP15_1387 - ABC-type amino acid transport/signal transduction system, periplasmic domain protein, at 1,463,210 to 1,463,992
_1387
HP15_1388: HP15_1388 - iron-containing alcohol dehydrogenase, at 1,464,161 to 1,465,348
_1388
Position (kb)
1460
1461
1462
1463
1464 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1459.741 kb on + strand, within HP15_1384 at 1459.806 kb on - strand, within HP15_1384 at 1459.810 kb on + strand, within HP15_1384 at 1459.906 kb on + strand at 1459.920 kb on - strand at 1460.092 kb on + strand, within HP15_1385 at 1460.151 kb on + strand, within HP15_1385 at 1460.187 kb on + strand, within HP15_1385 at 1460.229 kb on - strand, within HP15_1385 at 1460.248 kb on - strand, within HP15_1385 at 1460.409 kb on - strand, within HP15_1385 at 1460.426 kb on - strand, within HP15_1385 at 1460.431 kb on + strand, within HP15_1385 at 1460.591 kb on + strand, within HP15_1385 at 1460.601 kb on - strand, within HP15_1385 at 1460.627 kb on + strand, within HP15_1385 at 1460.691 kb on + strand at 1460.691 kb on + strand at 1460.814 kb on + strand at 1460.990 kb on + strand, within HP15_1386 at 1461.084 kb on - strand, within HP15_1386 at 1461.402 kb on - strand, within HP15_1386 at 1461.527 kb on + strand, within HP15_1386 at 1461.549 kb on + strand, within HP15_1386 at 1461.557 kb on - strand, within HP15_1386 at 1461.637 kb on + strand, within HP15_1386 at 1461.795 kb on - strand, within HP15_1386 at 1461.836 kb on + strand, within HP15_1386 at 1462.012 kb on + strand, within HP15_1386 at 1462.071 kb on - strand, within HP15_1386 at 1462.183 kb on - strand, within HP15_1386 at 1462.446 kb on + strand, within HP15_1386 at 1462.458 kb on - strand, within HP15_1386 at 1462.526 kb on - strand, within HP15_1386 at 1462.562 kb on - strand, within HP15_1386 at 1462.656 kb on + strand, within HP15_1386 at 1462.697 kb on - strand, within HP15_1386 at 1463.072 kb on - strand at 1463.250 kb on + strand at 1463.319 kb on - strand, within HP15_1387 at 1463.443 kb on + strand, within HP15_1387 at 1463.451 kb on - strand, within HP15_1387 at 1463.476 kb on + strand, within HP15_1387 at 1463.675 kb on + strand, within HP15_1387 at 1463.683 kb on - strand, within HP15_1387 at 1463.692 kb on - strand, within HP15_1387 at 1463.751 kb on + strand, within HP15_1387 at 1463.827 kb on - strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1464.002 kb on - strand at 1464.176 kb on + strand at 1464.176 kb on + strand at 1464.184 kb on - strand at 1464.184 kb on - strand at 1464.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vanillin 2.5 mM remove 1,459,741 + HP15_1384 0.75 +0.4 1,459,806 - HP15_1384 0.86 -1.8 1,459,810 + HP15_1384 0.87 -0.3 1,459,906 + +1.2 1,459,920 - +0.3 1,460,092 + HP15_1385 0.15 -3.2 1,460,151 + HP15_1385 0.23 +0.8 1,460,187 + HP15_1385 0.28 -0.7 1,460,229 - HP15_1385 0.34 -1.4 1,460,248 - HP15_1385 0.36 +1.7 1,460,409 - HP15_1385 0.58 +0.3 1,460,426 - HP15_1385 0.61 -1.9 1,460,431 + HP15_1385 0.61 +1.2 1,460,591 + HP15_1385 0.83 -0.4 1,460,601 - HP15_1385 0.85 -0.1 1,460,627 + HP15_1385 0.88 +0.4 1,460,691 + -0.2 1,460,691 + -0.7 1,460,814 + -2.0 1,460,990 + HP15_1386 0.11 -0.1 1,461,084 - HP15_1386 0.15 +1.7 1,461,402 - HP15_1386 0.28 +0.2 1,461,527 + HP15_1386 0.33 -2.3 1,461,549 + HP15_1386 0.34 +0.2 1,461,557 - HP15_1386 0.34 +0.4 1,461,637 + HP15_1386 0.37 +0.2 1,461,795 - HP15_1386 0.44 +0.4 1,461,836 + HP15_1386 0.45 -0.2 1,462,012 + HP15_1386 0.52 +2.3 1,462,071 - HP15_1386 0.55 +1.3 1,462,183 - HP15_1386 0.59 -0.7 1,462,446 + HP15_1386 0.70 +0.7 1,462,458 - HP15_1386 0.70 +0.5 1,462,526 - HP15_1386 0.73 +0.4 1,462,562 - HP15_1386 0.74 +1.7 1,462,656 + HP15_1386 0.78 +0.2 1,462,697 - HP15_1386 0.80 +1.2 1,463,072 - +0.7 1,463,250 + +0.3 1,463,319 - HP15_1387 0.14 +0.1 1,463,443 + HP15_1387 0.30 +0.7 1,463,451 - HP15_1387 0.31 -0.6 1,463,476 + HP15_1387 0.34 +1.2 1,463,675 + HP15_1387 0.59 -0.1 1,463,683 - HP15_1387 0.60 +0.4 1,463,692 - HP15_1387 0.62 -0.9 1,463,751 + HP15_1387 0.69 -2.5 1,463,827 - HP15_1387 0.79 +1.0 1,463,887 + HP15_1387 0.86 +0.4 1,463,887 + HP15_1387 0.86 -0.7 1,463,887 + HP15_1387 0.86 +0.6 1,464,002 - +0.3 1,464,176 + -2.7 1,464,176 + +0.4 1,464,184 - +0.4 1,464,184 - +0.2 1,464,184 - +1.7
Or see this region's nucleotide sequence