Experiment: m.b. Vanillin 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1307 and HP15_1308 are separated by 0 nucleotides HP15_1308 and HP15_1309 are separated by 50 nucleotides HP15_1309 and HP15_1310 are separated by 120 nucleotides
HP15_1307: HP15_1307 - N-acetyl-anhydromuranmyl-L-alanine amidase, at 1,367,759 to 1,368,385
_1307
HP15_1308: HP15_1308 - signaling modulator of AmpD, AmpE, at 1,368,386 to 1,368,901
_1308
HP15_1309: HP15_1309 - signaling modulator of AmpD, AmpE, at 1,368,952 to 1,369,272
_1309
HP15_1310: HP15_1310 - methyl-accepting chemotaxis sensory transducer, at 1,369,393 to 1,371,423
_1310
Position (kb)
1368
1369
1370 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1368.347 kb on + strand at 1368.438 kb on + strand, within HP15_1308 at 1368.463 kb on + strand, within HP15_1308 at 1368.471 kb on - strand, within HP15_1308 at 1368.504 kb on - strand, within HP15_1308 at 1368.692 kb on - strand, within HP15_1308 at 1368.719 kb on + strand, within HP15_1308 at 1368.719 kb on + strand, within HP15_1308 at 1368.750 kb on - strand, within HP15_1308 at 1368.793 kb on + strand, within HP15_1308 at 1368.799 kb on + strand, within HP15_1308 at 1368.799 kb on + strand, within HP15_1308 at 1368.799 kb on + strand, within HP15_1308 at 1368.807 kb on - strand, within HP15_1308 at 1368.851 kb on + strand at 1368.888 kb on - strand at 1369.156 kb on + strand, within HP15_1309 at 1369.521 kb on + strand at 1369.539 kb on - strand at 1369.712 kb on + strand, within HP15_1310 at 1369.761 kb on - strand, within HP15_1310 at 1369.779 kb on - strand, within HP15_1310 at 1369.872 kb on + strand, within HP15_1310 at 1369.952 kb on - strand, within HP15_1310 at 1369.953 kb on - strand, within HP15_1310 at 1369.953 kb on - strand, within HP15_1310 at 1370.048 kb on - strand, within HP15_1310 at 1370.055 kb on - strand, within HP15_1310 at 1370.109 kb on - strand, within HP15_1310 at 1370.272 kb on - strand, within HP15_1310
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vanillin 2.5 mM remove 1,368,347 + +0.2 1,368,438 + HP15_1308 0.10 -0.9 1,368,463 + HP15_1308 0.15 +1.6 1,368,471 - HP15_1308 0.16 -0.2 1,368,504 - HP15_1308 0.23 -0.4 1,368,692 - HP15_1308 0.59 +0.8 1,368,719 + HP15_1308 0.65 -0.0 1,368,719 + HP15_1308 0.65 +1.5 1,368,750 - HP15_1308 0.71 +1.2 1,368,793 + HP15_1308 0.79 -1.4 1,368,799 + HP15_1308 0.80 -0.4 1,368,799 + HP15_1308 0.80 +0.8 1,368,799 + HP15_1308 0.80 -1.4 1,368,807 - HP15_1308 0.82 +0.6 1,368,851 + -0.3 1,368,888 - -0.2 1,369,156 + HP15_1309 0.64 +1.8 1,369,521 + +0.1 1,369,539 - -0.0 1,369,712 + HP15_1310 0.16 -0.0 1,369,761 - HP15_1310 0.18 +0.4 1,369,779 - HP15_1310 0.19 -0.2 1,369,872 + HP15_1310 0.24 -0.7 1,369,952 - HP15_1310 0.28 -1.9 1,369,953 - HP15_1310 0.28 -0.4 1,369,953 - HP15_1310 0.28 -0.9 1,370,048 - HP15_1310 0.32 -0.4 1,370,055 - HP15_1310 0.33 +0.7 1,370,109 - HP15_1310 0.35 -0.1 1,370,272 - HP15_1310 0.43 +1.3
Or see this region's nucleotide sequence