Strain Fitness in Shewanella oneidensis MR-1 around SO0828

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
845,832	+				-0.9
845,842	+				-0.9
845,842	+				-1.4
845,842	+				-1.2
845,847	-				-1.4
845,856	+				-1.6
845,856	+				-0.9
845,856	+				+0.2
845,856	+				-2.0
845,856	+				-2.9
845,856	+				-3.1
845,864	-				-0.9
845,864	-				-0.7
845,864	-				-1.1
845,865	+				-1.5
845,866	+				-1.4
845,874	-				-0.5
845,912	+				+0.4
845,928	+				+0.7
845,928	+				+0.3
845,928	+				-0.6
845,928	+				-0.0
845,928	+				+2.2
845,928	+				+0.7
845,928	+				+1.0
845,928	+				+0.9
845,928	+				+0.4
845,934	-				+0.8
845,936	-				+2.0
845,936	-				-0.6
845,936	-				+0.5
845,936	-				+0.7
845,936	-				-0.2
845,939	+				+0.4
845,939	+				+1.0
845,939	+				+3.0
845,939	+				+0.9
845,939	+				+3.0
845,939	+				+0.6
845,939	+				+0.3
845,939	+				+1.0
845,939	+				+1.2
845,939	+				+1.0
845,939	+				+0.7
845,940	-				-1.6
845,942	-				+1.6
845,942	-				-0.6
845,947	+				+0.1
845,947	+				+1.7
845,947	+				+0.1
845,947	+				+0.4
845,947	+				-0.1
845,947	+				+3.4
845,947	+				+1.6
845,947	+				+0.9
845,947	+				+2.2
845,947	+				-0.2
845,947	+				+1.0
845,947	+				+0.9
845,947	+				+0.2
845,947	+				+0.0
845,947	+				+0.4
845,947	-				+0.0
845,947	-				+0.3
845,947	-				-0.3
845,947	-				-0.7
845,947	-				-1.0
845,947	-				+1.0
845,955	-				+0.9
845,955	-				-0.9
845,955	-				+0.0
845,955	-				-0.2
845,955	-				+0.2
845,955	-				+0.6
845,955	-				+1.9
845,955	-				+0.1
845,955	-				+4.2
845,955	-				+1.4
845,955	-				+0.3
845,955	-				+1.2
845,955	-				-0.0
845,955	-				+2.7
845,955	-				+0.8
845,955	-				+1.8
845,955	-				+0.4
845,955	-				+0.9
845,955	-				+0.5
845,982	+				+0.9
845,983	+				+0.5
845,983	+				+0.5
845,990	-				+1.7
845,991	-				+0.1
846,015	+				+1.5
846,015	+				+0.4
846,015	+				+0.1
846,015	+				+0.0
846,022	+				+0.4
846,023	-				+0.0
846,023	-				+0.7
846,023	-				+0.1
846,023	-				+1.2
846,052	+				+1.4
846,052	+				+0.3
846,060	-				+2.1
846,243	+				-1.0
846,254	+				-0.4
846,254	+				+0.6
846,262	+				+0.8
846,262	+				+0.3
846,262	+				-0.6
846,262	+				-0.6
846,262	+				-0.9
846,262	+				-0.6
846,262	+				-0.4
846,262	+				+0.4
846,262	+				-0.6
846,262	+				-0.4
846,262	+				-1.4
846,262	+				-0.3
846,262	+				+1.4
846,262	+				+0.8
846,262	+				-0.6
846,262	+				-0.8
846,262	+				+0.2
846,262	+				-0.3
846,262	+				+0.4
846,262	+				+1.4
846,262	+				-0.0
846,262	+				+1.4
846,262	+				+0.7
846,262	+				-0.1
846,262	+				+2.0
846,262	+				-0.1
846,267	+				-0.6
846,267	+				-0.7
846,267	+				-1.0
846,275	-				+0.4
846,278	-				+1.0
846,283	-				+0.7
846,283	-				-0.4
846,283	-				+1.7
846,286	-				+0.8
846,286	-				+1.4
846,294	-				+0.4
846,310	-				+0.2
846,347	+				+0.6
846,350	+				+1.3
846,358	+				+0.4
846,366	+				+1.1
846,366	+				+0.4
846,366	+				-0.2
846,366	+				+0.4
846,366	+				-0.9
846,366	+				+1.1
846,374	+				-1.4
846,376	+				+0.1
846,376	+				+0.2
846,379	+				-0.6
846,382	-				-0.1
846,384	+				-0.1
846,384	-				+0.4
846,384	-				+0.4
846,387	-				+0.7
846,390	-				+0.6
846,397	-				+0.3
846,402	-				+0.2
846,444	-				-0.6
846,453	-				-0.5
846,484	+				+0.8
846,516	-				+1.0
846,527	+				-0.2
846,527	+				+0.6
846,536	+				-0.6
846,544	+				+0.5
846,545	+				-0.6
846,649	+				+0.8
846,658	+				+0.3
846,659	-				-0.3
846,692	+				+0.4
846,699	-				-0.8
846,711	+				+2.7
846,711	+				-0.5
846,711	+				+1.1
846,719	-				+0.4
846,719	-				+0.2
846,719	-				-0.3
846,736	-				-0.4
846,742	+				+0.3
846,742	+				-0.2
846,742	+				-1.2
846,742	+				+0.8
846,742	+				+0.7
846,742	+				-0.5
846,742	+				+0.0
846,742	+				+0.6
846,742	+				+0.2
846,742	+				+1.2
846,743	-				+3.5
846,747	+				+1.4
846,747	+				+0.3
846,750	-				+0.1
846,750	-				+1.0
846,750	-				-0.2
846,750	-				+2.4
846,805	-				-0.2
846,812	-				-0.5
846,815	-				+1.4
846,821	+				-1.5
846,822	+				-0.7
846,822	+				+2.4
846,824	-				-0.2
846,829	-				+0.2
846,829	-				-0.6
846,839	-				+0.1
846,859	+				+1.6
846,872	+				+0.4
846,890	-				+0.3
846,891	-				+0.9
846,903	+				+2.1
846,908	+				+1.7
846,911	-				+1.6
846,911	-				+1.9
846,913	+				+0.7
846,916	-				+3.6
846,916	-				+0.8
846,916	-				+1.3
846,916	-				+1.0
846,926	-				+1.0
846,963	+		SO0828	0.13	+1.9
846,971	-		SO0828	0.14	+0.8
846,985	+		SO0828	0.15	+1.5
846,993	-		SO0828	0.16	+0.6
846,996	+		SO0828	0.16	+0.2
847,063	+		SO0828	0.23	+1.3
847,063	+		SO0828	0.23	-0.3
847,071	-		SO0828	0.23	+1.0
847,085	+		SO0828	0.25	+1.6
847,085	+		SO0828	0.25	+1.1
847,085	+		SO0828	0.25	+1.4
847,093	-		SO0828	0.25	+2.1
847,094	-		SO0828	0.26	+0.6
847,175	+		SO0828	0.33	+2.2
847,183	-		SO0828	0.34	-0.2
847,187	+		SO0828	0.34	+1.1
847,187	+		SO0828	0.34	+0.3
847,195	-		SO0828	0.35	+0.5
847,258	-		SO0828	0.41	+1.9
847,282	+		SO0828	0.43	+0.6
847,283	-		SO0828	0.43	+0.9
847,283	-		SO0828	0.43	+0.9
847,348	+		SO0828	0.49	+1.3
847,373	-		SO0828	0.52	+0.7
847,383	+		SO0828	0.53	+0.4
847,390	+		SO0828	0.53	+1.1
847,404	+		SO0828	0.55	+1.3
847,423	+		SO0828	0.56	+1.3
847,430	-		SO0828	0.57	+0.8
847,430	-		SO0828	0.57	+1.2
847,431	-		SO0828	0.57	+0.4
847,431	-		SO0828	0.57	+1.1
847,431	-		SO0828	0.57	+1.2
847,431	-		SO0828	0.57	+0.7
847,431	-		SO0828	0.57	+1.0
847,521	+		SO0828	0.66	+1.6
847,535	+		SO0828	0.67	+0.7
847,580	+		SO0828	0.71	+1.1
847,592	+		SO0828	0.72	+1.1
847,600	-		SO0828	0.73	+0.9
847,624	-		SO0828	0.75	+1.8
847,636	+		SO0828	0.77	+0.3
847,685	+		SO0828	0.81	+1.8
847,695	+		SO0828	0.82	+1.7
847,702	+		SO0828	0.83	+1.3
847,739	+		SO0828	0.86	+1.4
847,747	-		SO0828	0.87	+0.5
847,800	+				+0.6
847,838	+				+0.7
847,843	+				+0.8
847,843	+				+0.3
847,843	+				+1.1
847,843	+				+1.3
847,843	+				+1.6
847,843	+				+0.3
847,843	+				+1.6
847,843	+				+1.7
847,843	+				+1.1
847,843	+				+2.0
847,843	+				+0.6
847,848	+				+1.8
847,851	-				+0.4
847,851	-				+0.2
847,851	-				-0.0
847,851	-				+1.4
847,851	-				+1.9
847,851	-				+0.6
847,851	-				+1.2
847,851	-				+0.1
847,851	-				-0.2
847,851	-				+0.2
847,851	-				-0.8
847,851	-				+0.7
847,851	-				+1.7
847,851	-				+0.6
847,908	-				-0.7
847,911	+				+0.4
847,911	+				+0.8
847,911	+				+0.1
847,911	+				-0.8
847,911	+				+0.4
847,911	+				+0.1
847,911	+				+0.0
847,913	+				+1.8
847,913	+				-0.6
847,919	-				+3.9
847,919	-				+1.1
847,919	-				+1.7
847,919	-				-0.5
847,919	-				+0.6
847,920	-				-0.6
847,921	-				-0.5
847,921	-				+1.4
848,010	+				+0.0
848,026	+				+0.1
848,026	+				+1.1
848,026	+				-1.8
848,026	+				+1.0
848,026	+				-0.3
848,034	-				+0.3
848,034	-				+2.4
848,034	-				-1.5
848,034	-				+0.8
848,034	-				+0.4
848,034	-				-0.1
848,034	-				+0.3
848,034	-				+0.8
848,034	-				+0.8
848,034	-				+0.4
848,034	-				-0.9
848,034	-				-0.4
848,034	-				-2.7
848,034	-				+0.2
848,034	-				-0.1
848,034	-				-1.0
848,089	-				+0.4
848,097	+				+0.2
848,097	+				+2.0
848,097	+				-1.6
848,105	-				-0.5
848,105	-				-0.1
848,105	-				+0.4
848,105	-				+0.3
848,124	-				+0.4
848,133	+				+0.2
848,212	+				+0.1
848,220	-				+0.0
848,271	+		SO0830	0.13	-0.4
848,271	+		SO0830	0.13	+0.2
848,317	+		SO0830	0.16	-0.5
848,356	+		SO0830	0.19	+0.1
848,380	+		SO0830	0.21	+0.0
848,380	+		SO0830	0.21	+1.0
848,426	+		SO0830	0.24	-0.3
848,434	-		SO0830	0.25	+0.3
848,529	+		SO0830	0.32	-0.5
848,537	-		SO0830	0.32	-0.5
848,537	-		SO0830	0.32	+0.0
848,539	-		SO0830	0.32	-0.8
848,544	-		SO0830	0.33	-0.5
848,551	+		SO0830	0.33	-0.2
848,559	-		SO0830	0.34	+0.4
848,601	+		SO0830	0.37	+0.5
848,673	-		SO0830	0.42	+0.1
848,689	+		SO0830	0.43	+1.4
848,689	+		SO0830	0.43	+0.4
848,689	+		SO0830	0.43	+2.4
848,697	-		SO0830	0.44	+3.4
848,791	-		SO0830	0.51	+0.7