Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31770

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
3,318,048	-		PGA1_c31750	0.49	-0.6
3,318,066	+		PGA1_c31750	0.51	-0.2
3,318,111	-		PGA1_c31750	0.56	-2.6
3,318,268	-		PGA1_c31750	0.73	-1.5
3,318,307	+		PGA1_c31750	0.77	+0.8
3,318,331	+		PGA1_c31750	0.80	+2.4
3,318,338	+		PGA1_c31750	0.80	+1.9
3,318,338	+		PGA1_c31750	0.80	+0.9
3,318,351	-		PGA1_c31750	0.82	-0.9
3,318,423	+		PGA1_c31750	0.89	-0.7
3,318,428	+				-0.8
3,318,428	+				-3.1
3,318,431	-				+0.4
3,318,436	+				+0.3
3,318,436	-				-0.3
3,318,521	+				+0.5
3,318,582	-				+1.0
3,318,701	+		PGA1_c31760	0.59	-1.2
3,318,709	-		PGA1_c31760	0.63	+0.7
3,318,709	-		PGA1_c31760	0.63	-2.8
3,318,721	+		PGA1_c31760	0.70	+2.0
3,318,729	-		PGA1_c31760	0.74	+0.2
3,318,844	+				-0.0
3,318,844	+				+0.9
3,318,846	+				+0.2
3,318,846	-				-3.6
3,318,854	-				-1.4
3,318,891	+				+1.3
3,318,891	+				+0.3
3,318,891	+				+1.8
3,318,891	+				+2.3
3,318,899	-				+0.5
3,318,899	-				+1.6
3,318,899	-				+0.4
3,318,899	-				+0.2
3,318,906	+				+0.2
3,318,911	+				+1.4
3,318,919	-				-0.6
3,318,919	-				+0.7
3,318,919	-				-1.8
3,318,986	+				-0.2
3,318,986	+				-0.6
3,318,986	+				-2.5
3,318,989	-				+1.0
3,318,989	-				+0.5
3,318,994	-				-3.4
3,318,999	-				-1.8
3,319,004	-				+0.3
3,319,004	-				+1.2
3,319,019	-				-1.9
3,319,029	-				+0.2
3,319,063	+				+0.7
3,319,063	+				+0.8
3,319,085	-				+1.2
3,319,129	+				+1.6
3,319,134	+				+1.1
3,319,143	+				-1.6
3,319,184	-				+1.4
3,319,195	+		PGA1_c31770	0.10	+1.0
3,319,220	+		PGA1_c31770	0.11	+0.4
3,319,220	+		PGA1_c31770	0.11	-0.6
3,319,227	-		PGA1_c31770	0.12	-1.6
3,319,233	-		PGA1_c31770	0.12	-0.7
3,319,238	-		PGA1_c31770	0.12	-2.0
3,319,248	-		PGA1_c31770	0.13	-0.8
3,319,294	+		PGA1_c31770	0.15	+0.8
3,319,359	+		PGA1_c31770	0.18	-0.4
3,319,367	-		PGA1_c31770	0.19	-0.6
3,319,371	+		PGA1_c31770	0.19	+1.1
3,319,447	+		PGA1_c31770	0.23	-1.8
3,319,447	+		PGA1_c31770	0.23	-0.0
3,319,447	+		PGA1_c31770	0.23	+1.0
3,319,452	+		PGA1_c31770	0.23	-1.4
3,319,452	+		PGA1_c31770	0.23	+0.6
3,319,452	+		PGA1_c31770	0.23	-1.2
3,319,452	+		PGA1_c31770	0.23	-2.4
3,319,452	+		PGA1_c31770	0.23	+0.3
3,319,452	+		PGA1_c31770	0.23	+1.5
3,319,452	+		PGA1_c31770	0.23	-1.8
3,319,455	-		PGA1_c31770	0.23	-0.9
3,319,455	-		PGA1_c31770	0.23	+0.3
3,319,455	-		PGA1_c31770	0.23	+0.1
3,319,455	-		PGA1_c31770	0.23	-0.4
3,319,455	-		PGA1_c31770	0.23	-1.0
3,319,455	-		PGA1_c31770	0.23	-0.2
3,319,460	-		PGA1_c31770	0.23	+1.0
3,319,460	-		PGA1_c31770	0.23	-2.7
3,319,460	-		PGA1_c31770	0.23	-1.2
3,319,460	-		PGA1_c31770	0.23	-0.9
3,319,460	-		PGA1_c31770	0.23	+3.6
3,319,460	-		PGA1_c31770	0.23	-0.5
3,319,497	-		PGA1_c31770	0.25	+0.4
3,319,502	+		PGA1_c31770	0.25	-3.1
3,319,510	-		PGA1_c31770	0.26	+1.3
3,319,510	-		PGA1_c31770	0.26	-1.0
3,319,510	-		PGA1_c31770	0.26	+1.6
3,319,521	+		PGA1_c31770	0.26	-0.6
3,319,529	-		PGA1_c31770	0.27	+1.8
3,319,529	-		PGA1_c31770	0.27	-0.8
3,319,578	+		PGA1_c31770	0.29	+2.5
3,319,578	+		PGA1_c31770	0.29	-1.1
3,319,583	+		PGA1_c31770	0.29	+0.8
3,319,583	+		PGA1_c31770	0.29	-0.2
3,319,583	+		PGA1_c31770	0.29	+1.0
3,319,586	-		PGA1_c31770	0.29	+0.7
3,319,586	-		PGA1_c31770	0.29	-0.7
3,319,586	-		PGA1_c31770	0.29	+1.4
3,319,588	+		PGA1_c31770	0.29	+0.9
3,319,591	-		PGA1_c31770	0.30	+0.4
3,319,591	-		PGA1_c31770	0.30	+0.4
3,319,591	-		PGA1_c31770	0.30	-0.4
3,319,592	+		PGA1_c31770	0.30	-0.9
3,319,592	+		PGA1_c31770	0.30	-0.4
3,319,592	+		PGA1_c31770	0.30	+1.7
3,319,592	+		PGA1_c31770	0.30	-0.4
3,319,592	+		PGA1_c31770	0.30	+1.0
3,319,592	+		PGA1_c31770	0.30	-0.3
3,319,592	+		PGA1_c31770	0.30	+0.5
3,319,592	+		PGA1_c31770	0.30	+0.4
3,319,592	+		PGA1_c31770	0.30	-0.2
3,319,592	+		PGA1_c31770	0.30	-0.1
3,319,592	+		PGA1_c31770	0.30	+1.1
3,319,597	+		PGA1_c31770	0.30	-0.1
3,319,597	+		PGA1_c31770	0.30	+1.4
3,319,600	-		PGA1_c31770	0.30	+1.0
3,319,600	-		PGA1_c31770	0.30	+2.4
3,319,600	-		PGA1_c31770	0.30	-3.2
3,319,600	-		PGA1_c31770	0.30	+0.5
3,319,600	-		PGA1_c31770	0.30	+0.7
3,319,600	-		PGA1_c31770	0.30	+1.6
3,319,600	-		PGA1_c31770	0.30	+1.0
3,319,600	-		PGA1_c31770	0.30	+1.4
3,319,600	-		PGA1_c31770	0.30	+0.4
3,319,600	-		PGA1_c31770	0.30	+0.1
3,319,600	-		PGA1_c31770	0.30	+1.0
3,319,600	-		PGA1_c31770	0.30	-0.5
3,319,600	-		PGA1_c31770	0.30	+0.4
3,319,600	-		PGA1_c31770	0.30	-0.2
3,319,600	-		PGA1_c31770	0.30	-0.7
3,319,600	-		PGA1_c31770	0.30	+0.4
3,319,605	-		PGA1_c31770	0.30	-0.3
3,319,605	-		PGA1_c31770	0.30	-0.5
3,319,605	-		PGA1_c31770	0.30	-0.4
3,319,605	-		PGA1_c31770	0.30	-0.5
3,319,648	-		PGA1_c31770	0.32	-0.2
3,319,648	-		PGA1_c31770	0.32	+0.2
3,319,668	-		PGA1_c31770	0.33	+1.4
3,319,686	+		PGA1_c31770	0.34	-0.3
3,319,686	-		PGA1_c31770	0.34	-1.8
3,319,694	-		PGA1_c31770	0.35	-0.8
3,319,704	+		PGA1_c31770	0.35	-0.1
3,319,712	-		PGA1_c31770	0.35	+1.0
3,319,741	-		PGA1_c31770	0.37	-2.6
3,319,755	+		PGA1_c31770	0.38	+0.3
3,319,777	+		PGA1_c31770	0.39	+0.4
3,319,782	+		PGA1_c31770	0.39	-0.9
3,319,790	-		PGA1_c31770	0.39	-1.2
3,319,790	-		PGA1_c31770	0.39	+1.7
3,319,790	-		PGA1_c31770	0.39	+1.4
3,319,798	+		PGA1_c31770	0.40	-0.7
3,319,806	-		PGA1_c31770	0.40	+0.2
3,319,834	-		PGA1_c31770	0.41	+0.4
3,319,848	-		PGA1_c31770	0.42	+1.0
3,319,948	-		PGA1_c31770	0.47	+2.1
3,319,948	-		PGA1_c31770	0.47	-0.4
3,319,979	+		PGA1_c31770	0.48	+1.4
3,319,979	+		PGA1_c31770	0.48	+0.3
3,319,979	+		PGA1_c31770	0.48	-0.9
3,319,987	-		PGA1_c31770	0.49	+1.1
3,319,987	-		PGA1_c31770	0.49	+0.7
3,319,987	-		PGA1_c31770	0.49	-1.0
3,319,987	-		PGA1_c31770	0.49	-0.3
3,319,987	-		PGA1_c31770	0.49	+0.7
3,319,987	-		PGA1_c31770	0.49	+2.0
3,320,031	-		PGA1_c31770	0.51	+0.4
3,320,033	+		PGA1_c31770	0.51	+1.6
3,320,042	-		PGA1_c31770	0.51	+1.2
3,320,042	-		PGA1_c31770	0.51	+1.0
3,320,042	-		PGA1_c31770	0.51	+1.0
3,320,042	-		PGA1_c31770	0.51	-1.7
3,320,068	+		PGA1_c31770	0.53	-1.9
3,320,076	-		PGA1_c31770	0.53	-0.9
3,320,124	+		PGA1_c31770	0.55	+1.5
3,320,134	+		PGA1_c31770	0.56	-1.4
3,320,134	+		PGA1_c31770	0.56	-0.1
3,320,134	+		PGA1_c31770	0.56	+0.8
3,320,134	+		PGA1_c31770	0.56	-3.0
3,320,142	-		PGA1_c31770	0.56	+0.9
3,320,142	-		PGA1_c31770	0.56	+0.2
3,320,154	-		PGA1_c31770	0.57	+0.3
3,320,171	-		PGA1_c31770	0.58	-1.4
3,320,263	+		PGA1_c31770	0.62	-2.2
3,320,291	+		PGA1_c31770	0.64	-1.9
3,320,299	-		PGA1_c31770	0.64	-2.2
3,320,312	+		PGA1_c31770	0.65	-0.9
3,320,420	-		PGA1_c31770	0.70	+1.6
3,320,436	+		PGA1_c31770	0.71	+0.8
3,320,451	-		PGA1_c31770	0.71	+1.0
3,320,451	-		PGA1_c31770	0.71	-0.9
3,320,451	-		PGA1_c31770	0.71	-1.9
3,320,456	-		PGA1_c31770	0.72	-2.7
3,320,456	-		PGA1_c31770	0.72	-0.7
3,320,481	-		PGA1_c31770	0.73	-1.3
3,320,498	+		PGA1_c31770	0.74	-0.2
3,320,499	-		PGA1_c31770	0.74	+0.3
3,320,558	-		PGA1_c31770	0.77	-1.8
3,320,567	-		PGA1_c31770	0.77	+0.9
3,320,650	-		PGA1_c31770	0.81	+2.3
3,320,690	+		PGA1_c31770	0.83	+1.4
3,320,690	+		PGA1_c31770	0.83	+0.7
3,320,690	+		PGA1_c31770	0.83	+0.6
3,320,690	+		PGA1_c31770	0.83	-0.2
3,320,690	+		PGA1_c31770	0.83	+0.2
3,320,690	+		PGA1_c31770	0.83	-1.3
3,320,690	+		PGA1_c31770	0.83	+0.6
3,320,690	+		PGA1_c31770	0.83	-0.9
3,320,690	+		PGA1_c31770	0.83	-0.8
3,320,690	+		PGA1_c31770	0.83	+1.4
3,320,690	+		PGA1_c31770	0.83	-0.8
3,320,690	+		PGA1_c31770	0.83	+1.8
3,320,690	+		PGA1_c31770	0.83	+0.3
3,320,690	+		PGA1_c31770	0.83	-0.2
3,320,698	-		PGA1_c31770	0.83	-2.7
3,320,698	-		PGA1_c31770	0.83	-2.7
3,320,698	-		PGA1_c31770	0.83	-1.0
3,320,698	-		PGA1_c31770	0.83	+1.3
3,320,698	-		PGA1_c31770	0.83	-1.7
3,320,703	+		PGA1_c31770	0.84	-2.5
3,320,703	+		PGA1_c31770	0.84	+0.4
3,320,706	-		PGA1_c31770	0.84	-0.6
3,320,734	-		PGA1_c31770	0.85	+0.1
3,320,756	+		PGA1_c31770	0.86	+0.7
3,320,756	+		PGA1_c31770	0.86	+0.4
3,320,780	+		PGA1_c31770	0.87	-0.9
3,320,780	+		PGA1_c31770	0.87	+1.7
3,320,788	-		PGA1_c31770	0.88	-1.2
3,320,790	+		PGA1_c31770	0.88	+0.9
3,320,793	-		PGA1_c31770	0.88	+1.0
3,320,793	-		PGA1_c31770	0.88	+0.4
3,320,824	-		PGA1_c31770	0.90	+1.4
3,320,826	-		PGA1_c31770	0.90	+1.4
3,320,834	-				+0.6
3,320,861	-				-1.2
3,320,868	+				+0.4
3,320,896	-				+1.6
3,320,896	-				+1.1
3,320,913	+				+0.0
3,320,941	+				+1.3
3,320,948	+				+3.2
3,320,949	-				-1.0
3,320,949	-				-1.4
3,320,949	-				-0.3
3,320,973	+				-0.3
3,320,973	+				+0.8
3,320,973	+				+0.5
3,321,040	+				-2.5
3,321,040	+				+1.4
3,321,040	+				-0.9
3,321,045	+				+1.4
3,321,091	-				-0.8
3,321,095	+				+0.8
3,321,095	+				+0.7
3,321,101	+				+0.6
3,321,103	-				+2.4
3,321,103	-				+0.2
3,321,109	-				+0.6
3,321,109	-				-0.7
3,321,109	-				-0.7
3,321,121	+				+1.5
3,321,121	+				+0.8
3,321,121	+				-0.6
3,321,124	-				+1.0
3,321,136	-				+0.2
3,321,149	+				-0.1
3,321,162	-				-1.0