Strain Fitness in Shewanella amazonensis SB2B around Sama_3521

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
4,153,670	+		Sama_3519	0.83	+0.3
4,153,671	-		Sama_3519	0.83	-0.3
4,153,702	+		Sama_3519	0.88	+1.9
4,153,702	+		Sama_3519	0.88	-2.0
4,153,702	+		Sama_3519	0.88	-1.1
4,153,703	-		Sama_3519	0.89	-1.5
4,153,703	-		Sama_3519	0.89	-0.8
4,153,751	+				-0.6
4,153,752	-				+2.1
4,153,823	+				+0.4
4,153,837	-				+0.9
4,153,837	-				-0.9
4,153,837	-				-0.2
4,153,881	-		Sama_3520	0.11	+0.8
4,153,881	-		Sama_3520	0.11	+1.8
4,154,007	+		Sama_3520	0.30	+0.1
4,154,008	-		Sama_3520	0.30	+0.8
4,154,008	-		Sama_3520	0.30	-3.1
4,154,047	+		Sama_3520	0.35	-0.1
4,154,079	-		Sama_3520	0.40	+0.6
4,154,108	+		Sama_3520	0.44	-1.1
4,154,108	+		Sama_3520	0.44	+1.1
4,154,117	+		Sama_3520	0.46	+2.3
4,154,136	-		Sama_3520	0.48	-0.2
4,154,149	+		Sama_3520	0.50	+0.4
4,154,149	+		Sama_3520	0.50	-0.6
4,154,150	-		Sama_3520	0.50	+0.5
4,154,150	-		Sama_3520	0.50	-1.2
4,154,174	+		Sama_3520	0.54	-0.7
4,154,185	+		Sama_3520	0.55	-0.9
4,154,185	+		Sama_3520	0.55	-1.2
4,154,185	+		Sama_3520	0.55	+0.7
4,154,247	+		Sama_3520	0.64	+1.8
4,154,247	+		Sama_3520	0.64	+1.1
4,154,248	-		Sama_3520	0.64	+0.4
4,154,285	+		Sama_3520	0.70	-1.9
4,154,343	+		Sama_3520	0.78	-1.2
4,154,343	+		Sama_3520	0.78	+0.6
4,154,343	+		Sama_3520	0.78	-0.0
4,154,343	+		Sama_3520	0.78	-0.3
4,154,344	-		Sama_3520	0.78	+0.1
4,154,344	-		Sama_3520	0.78	+0.2
4,154,344	-		Sama_3520	0.78	+0.7
4,154,356	-		Sama_3520	0.80	+0.9
4,154,417	+		Sama_3520	0.89	-2.6
4,154,417	+		Sama_3520	0.89	-1.2
4,154,418	-		Sama_3520	0.89	-0.2
4,154,490	+				-1.3
4,154,496	+				-1.1
4,154,496	+				+0.1
4,154,496	+				+1.5
4,154,496	+				+0.7
4,154,496	+				+0.4
4,154,497	-				+2.3
4,154,497	-				-1.6
4,154,497	-				+0.1
4,154,497	-				+0.3
4,154,497	-				+1.4
4,154,518	+				+0.5
4,154,518	+				+0.6
4,154,518	+				+0.7
4,154,518	+				+2.1
4,154,518	+				+0.3
4,154,518	+				+0.2
4,154,519	-				-0.7
4,154,554	+				-2.6
4,154,587	+				+0.3
4,154,607	+				-0.7
4,154,607	+				-0.8
4,154,608	-				-0.4
4,154,608	-				-1.6
4,154,608	-				-1.1
4,154,616	+				+0.3
4,154,616	+				-1.5
4,154,616	+				-0.4
4,154,616	+				-0.4
4,154,616	+				+0.3
4,154,616	+				-0.1
4,154,616	+				-1.3
4,154,617	-				-0.6
4,154,617	-				+0.2
4,154,617	-				+0.0
4,154,617	-				-0.3
4,154,617	-				-1.6
4,154,617	-				-1.2
4,154,617	-				-0.9
4,154,617	-				-0.9
4,154,617	-				-2.0
4,154,637	+				+0.5
4,154,638	-				+0.3
4,154,638	-				+0.7
4,154,655	+		Sama_3521	0.13	-0.3
4,154,655	+		Sama_3521	0.13	-0.3
4,154,655	+		Sama_3521	0.13	+0.5
4,154,655	+		Sama_3521	0.13	-1.6
4,154,656	-		Sama_3521	0.13	-1.2
4,154,656	-		Sama_3521	0.13	-2.2
4,154,692	+		Sama_3521	0.23	+0.1
4,154,707	+		Sama_3521	0.27	-0.9
4,154,708	-		Sama_3521	0.27	+1.3
4,154,708	-		Sama_3521	0.27	-1.1
4,154,756	+		Sama_3521	0.40	+0.1
4,154,756	+		Sama_3521	0.40	+0.3
4,154,756	+		Sama_3521	0.40	-1.5
4,154,756	+		Sama_3521	0.40	-0.7
4,154,756	+		Sama_3521	0.40	-0.6
4,154,756	+		Sama_3521	0.40	-1.1
4,154,756	+		Sama_3521	0.40	+0.2
4,154,756	+		Sama_3521	0.40	+0.7
4,154,756	+		Sama_3521	0.40	-1.7
4,154,756	+		Sama_3521	0.40	+0.6
4,154,756	+		Sama_3521	0.40	-0.9
4,154,756	+		Sama_3521	0.40	+2.0
4,154,756	+		Sama_3521	0.40	-1.9
4,154,756	+		Sama_3521	0.40	-0.3
4,154,756	+		Sama_3521	0.40	-0.7
4,154,756	+		Sama_3521	0.40	+0.2
4,154,756	+		Sama_3521	0.40	-0.9
4,154,756	+		Sama_3521	0.40	-1.0
4,154,757	-		Sama_3521	0.40	-0.5
4,154,757	-		Sama_3521	0.40	-3.0
4,154,757	-		Sama_3521	0.40	+0.6
4,154,757	-		Sama_3521	0.40	-0.3
4,154,757	-		Sama_3521	0.40	-0.6
4,154,757	-		Sama_3521	0.40	+0.8
4,154,757	-		Sama_3521	0.40	-1.2
4,154,757	-		Sama_3521	0.40	+0.6
4,154,757	-		Sama_3521	0.40	+0.8
4,154,757	-		Sama_3521	0.40	-0.0
4,154,757	-		Sama_3521	0.40	-1.4
4,154,757	-		Sama_3521	0.40	-1.5
4,154,757	-		Sama_3521	0.40	+1.4
4,154,757	-		Sama_3521	0.40	+0.6
4,154,763	+		Sama_3521	0.42	+0.1
4,154,763	+		Sama_3521	0.42	-1.3
4,154,764	-		Sama_3521	0.42	-0.5
4,154,764	-		Sama_3521	0.42	-0.8
4,154,775	+		Sama_3521	0.45	+0.0
4,154,775	+		Sama_3521	0.45	-0.9
4,154,775	+		Sama_3521	0.45	+0.5
4,154,776	-		Sama_3521	0.45	-0.6
4,154,776	-		Sama_3521	0.45	-0.8
4,154,776	-		Sama_3521	0.45	+0.3
4,154,776	-		Sama_3521	0.45	+0.2
4,154,776	-		Sama_3521	0.45	+0.1
4,154,779	-		Sama_3521	0.46	+0.3
4,154,941	+		Sama_3521	0.89	+0.1
4,154,941	+		Sama_3521	0.89	-0.3
4,154,941	+		Sama_3521	0.89	+0.5
4,154,942	-		Sama_3521	0.89	+0.1
4,154,942	-		Sama_3521	0.89	+0.1
4,154,975	+				+0.9
4,154,976	-				+0.1
4,154,976	-				-2.5
4,154,986	+				-1.0
4,154,986	+				-0.7
4,154,986	+				+1.8
4,154,986	+				-0.1
4,154,986	+				+0.4
4,154,986	+				-0.4
4,154,986	+				-2.0
4,154,987	-				+1.3
4,154,987	-				+0.5
4,154,987	-				+0.0
4,154,987	-				-0.3
4,155,000	+				+1.1
4,155,001	-				-1.4
4,155,001	-				-0.2
4,155,022	+				-0.0
4,155,022	+				+1.3
4,155,023	-				+0.1
4,155,031	+				-0.1
4,155,031	+				-0.8
4,155,031	+				-1.8
4,155,031	+				-1.2
4,155,031	+				+0.5
4,155,031	+				-0.9
4,155,032	-				+1.2
4,155,046	+				-0.2
4,155,046	+				-1.0
4,155,047	-				+2.5
4,155,112	+				-0.1
4,155,112	+				+1.5
4,155,112	+				-0.1
4,155,112	+				-0.5
4,155,113	-				-0.9
4,155,113	-				+0.5
4,155,113	-				+0.3
4,155,119	+				+1.1
4,155,119	+				-0.3
4,155,161	+				+0.1
4,155,162	-				+0.5
4,155,171	-				-0.6
4,155,171	-				-0.4
4,155,248	+				-0.1
4,155,248	+				-0.7
4,155,248	+				-1.2
4,155,249	-				+0.1
4,155,296	+				-0.1
4,155,296	+				+1.5
4,155,344	+		Sama_3522	0.12	-0.6
4,155,444	+		Sama_3522	0.17	-2.0
4,155,444	+		Sama_3522	0.17	+0.4
4,155,444	+		Sama_3522	0.17	-0.1
4,155,444	+		Sama_3522	0.17	-0.7
4,155,445	-		Sama_3522	0.17	-1.3
4,155,445	-		Sama_3522	0.17	-0.3
4,155,445	-		Sama_3522	0.17	+0.5
4,155,445	-		Sama_3522	0.17	-0.4
4,155,445	-		Sama_3522	0.17	+0.0
4,155,445	-		Sama_3522	0.17	-0.5
4,155,445	-		Sama_3522	0.17	+1.2
4,155,456	+		Sama_3522	0.18	+2.3
4,155,456	+		Sama_3522	0.18	-0.1
4,155,456	+		Sama_3522	0.18	+0.3
4,155,456	+		Sama_3522	0.18	-0.2
4,155,456	+		Sama_3522	0.18	+0.1
4,155,456	+		Sama_3522	0.18	+0.0
4,155,457	-		Sama_3522	0.18	+0.5
4,155,457	-		Sama_3522	0.18	-0.5
4,155,457	-		Sama_3522	0.18	-0.5
4,155,457	-		Sama_3522	0.18	-0.7
4,155,457	-		Sama_3522	0.18	-0.3
4,155,617	+		Sama_3522	0.26	-0.2
4,155,618	-		Sama_3522	0.27	-0.9
4,155,618	-		Sama_3522	0.27	+0.6
4,155,618	-		Sama_3522	0.27	-1.9
4,155,618	-		Sama_3522	0.27	-1.1
4,155,657	+		Sama_3522	0.29	+0.7
4,155,657	+		Sama_3522	0.29	-0.3
4,155,657	+		Sama_3522	0.29	-0.7
4,155,657	+		Sama_3522	0.29	-0.9
4,155,657	+		Sama_3522	0.29	+0.9
4,155,658	-		Sama_3522	0.29	-3.0
4,155,658	-		Sama_3522	0.29	-0.6
4,155,658	-		Sama_3522	0.29	+0.3
4,155,658	-		Sama_3522	0.29	+1.7
4,155,658	-		Sama_3522	0.29	+1.3
4,155,658	-		Sama_3522	0.29	+1.3
4,155,658	-		Sama_3522	0.29	+0.2
4,155,965	+		Sama_3522	0.45	-0.1
4,155,966	-		Sama_3522	0.45	-1.2
4,155,971	+		Sama_3522	0.45	+0.3
4,155,972	-		Sama_3522	0.45	+0.5
4,155,972	-		Sama_3522	0.45	+0.4
4,155,972	-		Sama_3522	0.45	+0.1
4,155,980	+		Sama_3522	0.45	-0.6
4,155,980	+		Sama_3522	0.45	+0.1
4,155,981	-		Sama_3522	0.46	+0.4