Strain Fitness in Shewanella amazonensis SB2B around Sama_3302

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
3,928,005	+		Sama_3301	0.13	+1.3
3,928,005	+		Sama_3301	0.13	+1.7
3,928,005	+		Sama_3301	0.13	-0.1
3,928,006	-		Sama_3301	0.13	+0.6
3,928,006	-		Sama_3301	0.13	+1.0
3,928,006	-		Sama_3301	0.13	+0.3
3,928,006	-		Sama_3301	0.13	+0.6
3,928,006	-		Sama_3301	0.13	-0.8
3,928,032	+		Sama_3301	0.16	-0.4
3,928,032	+		Sama_3301	0.16	+0.1
3,928,032	+		Sama_3301	0.16	+0.2
3,928,032	+		Sama_3301	0.16	-1.1
3,928,032	+		Sama_3301	0.16	+0.4
3,928,033	-		Sama_3301	0.16	-0.1
3,928,046	-		Sama_3301	0.17	+1.8
3,928,070	+		Sama_3301	0.20	-0.6
3,928,070	+		Sama_3301	0.20	-1.0
3,928,070	+		Sama_3301	0.20	-1.2
3,928,070	+		Sama_3301	0.20	-0.8
3,928,070	+		Sama_3301	0.20	+1.7
3,928,070	+		Sama_3301	0.20	+0.4
3,928,071	-		Sama_3301	0.20	+0.0
3,928,071	-		Sama_3301	0.20	-2.1
3,928,071	-		Sama_3301	0.20	-0.4
3,928,071	-		Sama_3301	0.20	-0.1
3,928,080	+		Sama_3301	0.21	+1.9
3,928,081	-		Sama_3301	0.22	-3.3
3,928,092	+		Sama_3301	0.23	+0.5
3,928,092	+		Sama_3301	0.23	+0.2
3,928,092	+		Sama_3301	0.23	-0.8
3,928,093	-		Sama_3301	0.23	-1.3
3,928,093	-		Sama_3301	0.23	+1.1
3,928,093	-		Sama_3301	0.23	+0.5
3,928,093	-		Sama_3301	0.23	+0.7
3,928,113	+		Sama_3301	0.25	-0.2
3,928,114	-		Sama_3301	0.25	-0.7
3,928,114	-		Sama_3301	0.25	+0.4
3,928,158	+		Sama_3301	0.31	-0.5
3,928,158	+		Sama_3301	0.31	-1.3
3,928,158	+		Sama_3301	0.31	+0.4
3,928,158	+		Sama_3301	0.31	-2.0
3,928,159	-		Sama_3301	0.31	-0.2
3,928,159	-		Sama_3301	0.31	+0.2
3,928,159	-		Sama_3301	0.31	-1.1
3,928,186	+		Sama_3301	0.34	+0.2
3,928,186	+		Sama_3301	0.34	-1.6
3,928,186	+		Sama_3301	0.34	-0.1
3,928,187	-		Sama_3301	0.34	-0.6
3,928,188	+		Sama_3301	0.34	-0.6
3,928,188	+		Sama_3301	0.34	+0.4
3,928,188	+		Sama_3301	0.34	-0.5
3,928,188	+		Sama_3301	0.34	+0.1
3,928,188	+		Sama_3301	0.34	-0.9
3,928,188	+		Sama_3301	0.34	+0.7
3,928,189	-		Sama_3301	0.34	+0.4
3,928,189	-		Sama_3301	0.34	-0.5
3,928,189	-		Sama_3301	0.34	-0.5
3,928,209	+		Sama_3301	0.36	-0.4
3,928,209	+		Sama_3301	0.36	+0.9
3,928,209	+		Sama_3301	0.36	+1.9
3,928,209	+		Sama_3301	0.36	+2.0
3,928,210	-		Sama_3301	0.37	+0.0
3,928,210	-		Sama_3301	0.37	+1.0
3,928,210	-		Sama_3301	0.37	+0.3
3,928,243	-		Sama_3301	0.40	+1.0
3,928,243	-		Sama_3301	0.40	-0.1
3,928,254	+		Sama_3301	0.42	-2.0
3,928,255	-		Sama_3301	0.42	-0.5
3,928,255	-		Sama_3301	0.42	-0.0
3,928,255	-		Sama_3301	0.42	-1.2
3,928,278	+		Sama_3301	0.45	-0.2
3,928,278	+		Sama_3301	0.45	-0.1
3,928,278	+		Sama_3301	0.45	+0.9
3,928,278	+		Sama_3301	0.45	-1.2
3,928,279	-		Sama_3301	0.45	-0.0
3,928,279	-		Sama_3301	0.45	+1.0
3,928,279	-		Sama_3301	0.45	-1.1
3,928,279	-		Sama_3301	0.45	-0.2
3,928,288	-		Sama_3301	0.46	+0.2
3,928,288	-		Sama_3301	0.46	+0.7
3,928,335	+		Sama_3301	0.51	+0.3
3,928,371	+		Sama_3301	0.55	+1.1
3,928,389	+		Sama_3301	0.57	-0.9
3,928,389	+		Sama_3301	0.57	-0.3
3,928,390	-		Sama_3301	0.58	+0.8
3,928,398	+		Sama_3301	0.59	-0.5
3,928,398	+		Sama_3301	0.59	-0.9
3,928,399	-		Sama_3301	0.59	-0.7
3,928,539	+		Sama_3301	0.75	-1.2
3,928,601	+		Sama_3301	0.82	+0.7
3,928,601	+		Sama_3301	0.82	+0.5
3,928,635	+		Sama_3301	0.86	-0.4
3,928,635	+		Sama_3301	0.86	+0.7
3,928,635	+		Sama_3301	0.86	+1.3
3,928,636	-		Sama_3301	0.86	+0.5
3,928,636	-		Sama_3301	0.86	-0.6
3,928,636	-		Sama_3301	0.86	+0.3
3,928,636	-		Sama_3301	0.86	-0.8
3,928,636	-		Sama_3301	0.86	-1.7
3,928,636	-		Sama_3301	0.86	-0.4
3,928,636	-		Sama_3301	0.86	+0.3
3,928,636	-		Sama_3301	0.86	-1.3
3,928,721	-				-0.8
3,928,734	+				-0.1
3,928,734	+				-1.4
3,928,734	+				-1.9
3,928,734	+				-0.1
3,928,734	+				-1.1
3,928,735	-				+0.7
3,928,754	+				+0.3
3,928,754	+				+0.9
3,928,755	-				-0.4
3,928,835	+				-0.1
3,928,835	+				-0.2
3,928,835	+				+0.1
3,928,835	+				+0.3
3,928,835	+				-0.7
3,928,835	+				-1.5
3,928,835	+				-0.7
3,928,836	-				-0.8
3,928,836	-				+0.2
3,928,836	-				-0.5
3,928,895	-				-0.3
3,928,895	+				+0.2
3,928,896	-				+0.2
3,928,905	+				+0.4
3,928,905	+				-2.2
3,928,906	-				+1.9
3,928,906	-				-1.1
3,928,920	-				-0.3
3,928,920	-				-0.3
3,928,920	-				+1.2
3,928,946	+				+0.9
3,928,946	+				-0.4
3,928,963	+				-0.2
3,928,964	-				+0.6
3,928,964	-				-2.4
3,929,043	-		Sama_3302	0.20	-2.1
3,929,043	-		Sama_3302	0.20	-1.9
3,929,063	-		Sama_3302	0.27	-2.9
3,929,063	-		Sama_3302	0.27	+0.7
3,929,063	-		Sama_3302	0.27	+1.1
3,929,230	-		Sama_3302	0.82	-1.0
3,929,240	-		Sama_3302	0.85	+0.2
3,929,240	-		Sama_3302	0.85	-0.4
3,929,240	-		Sama_3302	0.85	+2.2
3,929,240	-		Sama_3302	0.85	-1.3
3,929,240	-		Sama_3302	0.85	-0.3
3,929,244	-		Sama_3302	0.87	-0.2
3,929,244	-		Sama_3302	0.87	-1.3
3,929,244	-		Sama_3302	0.87	-2.4
3,929,296	+				+0.4
3,929,359	-		Sama_3303	0.11	-1.1
3,929,440	+		Sama_3303	0.23	-0.1
3,929,440	+		Sama_3303	0.23	+0.7
3,929,440	+		Sama_3303	0.23	+0.9
3,929,681	+		Sama_3303	0.59	-0.2
3,929,681	+		Sama_3303	0.59	-0.4
3,929,707	+		Sama_3303	0.62	-0.6
3,929,707	+		Sama_3303	0.62	-0.1
3,929,707	+		Sama_3303	0.62	-0.1
3,929,707	+		Sama_3303	0.62	+1.3
3,929,816	+		Sama_3303	0.79	+0.5
3,929,816	+		Sama_3303	0.79	+0.0
3,929,816	+		Sama_3303	0.79	+1.0
3,929,816	+		Sama_3303	0.79	+2.7
3,929,816	+		Sama_3303	0.79	-0.8
3,929,820	+		Sama_3303	0.79	-0.3
3,929,820	+		Sama_3303	0.79	+1.1
3,929,821	-		Sama_3303	0.79	-0.8
3,929,821	-		Sama_3303	0.79	-0.9
3,929,879	+		Sama_3303	0.88	+0.2
3,929,978	-				-2.1
3,929,978	-				-1.1
3,930,032	-				-4.1
3,930,043	-				-1.8
3,930,043	-				-2.0
3,930,180	-		Sama_3304	0.16	-0.9
3,930,207	+		Sama_3304	0.18	-1.4
3,930,207	+		Sama_3304	0.18	-1.9
3,930,207	+		Sama_3304	0.18	-2.0
3,930,208	-		Sama_3304	0.18	-2.9
3,930,208	-		Sama_3304	0.18	-1.1
3,930,208	-		Sama_3304	0.18	-2.7
3,930,208	-		Sama_3304	0.18	-1.7
3,930,276	-		Sama_3304	0.23	-1.2