Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2595

Experiment: Xylitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylitol (C)
2,758,660	-				+1.2
2,758,661	+				-1.4
2,758,663	+				+0.2
2,758,663	+				-1.2
2,758,672	-				+1.0
2,758,700	+				-0.4
2,758,712	+				-0.2
2,758,730	-				-0.8
2,758,731	-				-1.0
2,758,744	-				+1.3
2,758,744	-				+0.6
2,758,766	-				-0.1
2,758,768	+				+0.2
2,758,804	-		Dshi_2593	0.10	-1.0
2,758,814	-		Dshi_2593	0.12	-0.8
2,758,814	-		Dshi_2593	0.12	-1.3
2,758,838	+		Dshi_2593	0.16	-1.4
2,758,855	-		Dshi_2593	0.18	+1.2
2,758,857	+		Dshi_2593	0.19	+0.3
2,758,857	+		Dshi_2593	0.19	-2.8
2,758,865	-		Dshi_2593	0.20	-0.3
2,758,865	-		Dshi_2593	0.20	-0.7
2,758,889	+		Dshi_2593	0.24	-1.4
2,758,909	-		Dshi_2593	0.27	-0.4
2,758,937	+		Dshi_2593	0.31	+1.0
2,758,941	+		Dshi_2593	0.32	-1.4
2,758,946	+		Dshi_2593	0.33	+0.0
2,758,958	-		Dshi_2593	0.35	-0.1
2,759,052	+		Dshi_2593	0.49	+0.0
2,759,145	-		Dshi_2593	0.64	-0.5
2,759,150	-		Dshi_2593	0.65	-0.1
2,759,161	-		Dshi_2593	0.67	+1.2
2,759,165	-		Dshi_2593	0.67	+0.6
2,759,173	-		Dshi_2593	0.68	-1.0
2,759,200	-		Dshi_2593	0.73	+0.1
2,759,221	+		Dshi_2593	0.76	+0.4
2,759,233	-		Dshi_2593	0.78	-0.5
2,759,236	+		Dshi_2593	0.78	-0.8
2,759,261	-		Dshi_2593	0.82	-3.1
2,759,266	-		Dshi_2593	0.83	+0.2
2,759,276	-		Dshi_2593	0.85	-0.7
2,759,304	-		Dshi_2593	0.89	-0.5
2,759,309	-		Dshi_2593	0.90	-0.5
2,759,314	+				+1.0
2,759,322	-				+0.3
2,759,322	-				-1.2
2,759,352	-				-0.4
2,759,354	+				+0.9
2,759,398	-		Dshi_2594	0.10	-1.2
2,759,416	+		Dshi_2594	0.17	+0.3
2,759,416	+		Dshi_2594	0.17	-2.0
2,759,434	+		Dshi_2594	0.23	-0.2
2,759,465	-		Dshi_2594	0.35	+0.1
2,759,465	-		Dshi_2594	0.35	+1.0
2,759,489	-		Dshi_2594	0.44	-0.0
2,759,513	+		Dshi_2594	0.52	+0.0
2,759,538	-		Dshi_2594	0.62	+1.0
2,759,540	+		Dshi_2594	0.62	-0.6
2,759,548	-		Dshi_2594	0.65	+0.1
2,759,559	+		Dshi_2594	0.69	+1.3
2,759,559	+		Dshi_2594	0.69	-0.5
2,759,590	-		Dshi_2594	0.81	-2.4
2,759,591	-		Dshi_2594	0.81	-3.4
2,759,591	-		Dshi_2594	0.81	-1.8
2,759,638	+				-1.4
2,759,644	-				+0.3
2,759,646	-				+0.6
2,759,646	-				-0.1
2,759,659	+				+0.2
2,759,675	-				+0.1
2,759,676	-				-1.1
2,759,719	+				-0.0
2,759,779	-				-1.7
2,759,839	-		Dshi_2595	0.12	-0.6
2,759,846	+		Dshi_2595	0.13	-1.6
2,759,854	-		Dshi_2595	0.13	-0.4
2,759,875	+		Dshi_2595	0.15	+0.9
2,759,900	-		Dshi_2595	0.16	+0.9
2,759,910	+		Dshi_2595	0.17	+0.2
2,759,912	+		Dshi_2595	0.17	-1.5
2,759,914	-		Dshi_2595	0.17	+1.0
2,759,929	+		Dshi_2595	0.18	-0.6
2,760,064	-		Dshi_2595	0.27	-1.1
2,760,074	+		Dshi_2595	0.28	-0.2
2,760,074	+		Dshi_2595	0.28	+0.6
2,760,082	+		Dshi_2595	0.28	+0.3
2,760,082	-		Dshi_2595	0.28	+0.1
2,760,120	-		Dshi_2595	0.31	-0.3
2,760,133	-		Dshi_2595	0.31	-0.2
2,760,169	+		Dshi_2595	0.34	-0.4
2,760,197	+		Dshi_2595	0.36	-0.2
2,760,198	-		Dshi_2595	0.36	-0.5
2,760,222	+		Dshi_2595	0.37	-0.3
2,760,222	+		Dshi_2595	0.37	-1.3
2,760,230	-		Dshi_2595	0.38	+1.9
2,760,230	-		Dshi_2595	0.38	-0.3
2,760,230	-		Dshi_2595	0.38	+0.6
2,760,230	-		Dshi_2595	0.38	+0.2
2,760,259	+		Dshi_2595	0.40	+0.7
2,760,276	-		Dshi_2595	0.41	+0.7
2,760,292	+		Dshi_2595	0.42	+1.0
2,760,299	-		Dshi_2595	0.42	-1.7
2,760,307	+		Dshi_2595	0.43	+1.6
2,760,315	-		Dshi_2595	0.43	-0.7
2,760,316	+		Dshi_2595	0.44	+0.3
2,760,337	+		Dshi_2595	0.45	+1.3
2,760,342	+		Dshi_2595	0.45	-0.6
2,760,402	+		Dshi_2595	0.49	+0.1
2,760,410	-		Dshi_2595	0.50	+1.0
2,760,410	-		Dshi_2595	0.50	-0.7
2,760,426	+		Dshi_2595	0.51	-0.1
2,760,426	+		Dshi_2595	0.51	-0.3
2,760,434	-		Dshi_2595	0.51	+0.0
2,760,515	+		Dshi_2595	0.57	-0.2
2,760,515	+		Dshi_2595	0.57	-0.5
2,760,527	-		Dshi_2595	0.57	+0.1
2,760,537	-		Dshi_2595	0.58	+2.2
2,760,582	+		Dshi_2595	0.61	+0.7
2,760,582	+		Dshi_2595	0.61	-0.4
2,760,582	+		Dshi_2595	0.61	+0.6
2,760,653	+		Dshi_2595	0.66	-0.4
2,760,668	+		Dshi_2595	0.67	+0.2
2,760,714	-		Dshi_2595	0.70	+1.4
2,760,738	-		Dshi_2595	0.71	-1.9
2,760,759	+		Dshi_2595	0.73	+0.6
2,760,761	+		Dshi_2595	0.73	+1.3
2,760,828	+		Dshi_2595	0.77	+0.6
2,760,897	+		Dshi_2595	0.82	-0.8
2,760,905	+		Dshi_2595	0.82	+0.6
2,760,950	-		Dshi_2595	0.85	+1.2
2,760,955	-		Dshi_2595	0.85	-0.1
2,760,992	+		Dshi_2595	0.88	+2.3
2,761,000	-		Dshi_2595	0.88	+0.1
2,761,000	-		Dshi_2595	0.88	+0.6
2,761,071	-				-0.2
2,761,072	-				-0.1
2,761,098	-				-1.5
2,761,108	-				-0.3
2,761,108	-				-0.0
2,761,161	+				-0.6
2,761,194	-				-0.3
2,761,244	+		Dshi_2596	0.10	-0.8
2,761,374	-		Dshi_2596	0.29	-1.2
2,761,378	+		Dshi_2596	0.30	+0.3
2,761,435	-		Dshi_2596	0.38	+0.3
2,761,436	-		Dshi_2596	0.38	+0.3
2,761,443	-		Dshi_2596	0.39	-0.4
2,761,469	+		Dshi_2596	0.43	+2.0
2,761,469	+		Dshi_2596	0.43	+0.4
2,761,477	-		Dshi_2596	0.44	+0.6
2,761,525	+		Dshi_2596	0.51	-0.1
2,761,544	-		Dshi_2596	0.54	-0.4
2,761,560	+		Dshi_2596	0.57	-1.6
2,761,573	+		Dshi_2596	0.58	+1.4
2,761,573	+		Dshi_2596	0.58	+0.7
2,761,573	+		Dshi_2596	0.58	-1.7
2,761,573	+		Dshi_2596	0.58	+0.4
2,761,573	+		Dshi_2596	0.58	-0.2
2,761,581	-		Dshi_2596	0.60	-0.6
2,761,618	-		Dshi_2596	0.65	-2.2
2,761,772	+		Dshi_2596	0.88	-1.7
2,761,817	+				+0.0
2,761,898	+				-0.4
2,761,906	-				-0.9
2,761,967	-		Dshi_2597	0.16	-0.6
2,762,126	-		Dshi_2597	0.38	-0.1
2,762,129	+		Dshi_2597	0.38	+0.8
2,762,138	+		Dshi_2597	0.40	+0.5
2,762,138	+		Dshi_2597	0.40	-1.1
2,762,139	-		Dshi_2597	0.40	-0.9