Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2084

Experiment: Xylitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylitol (C)
2,203,086	+		Dshi_2082	0.77	+0.2
2,203,087	+		Dshi_2082	0.77	+0.8
2,203,130	-		Dshi_2082	0.81	+0.3
2,203,130	-		Dshi_2082	0.81	+0.8
2,203,225	+		Dshi_2082	0.88	+0.4
2,203,308	-				-0.0
2,203,323	+				-1.5
2,203,565	-				+0.6
2,203,675	+		Dshi_2083	0.33	-0.6
2,203,677	+		Dshi_2083	0.33	+0.1
2,203,683	-		Dshi_2083	0.34	+1.4
2,203,688	+		Dshi_2083	0.35	-1.1
2,203,711	+		Dshi_2083	0.40	-0.4
2,203,808	-		Dshi_2083	0.61	+0.6
2,203,895	-		Dshi_2083	0.80	-1.8
2,203,955	-				+0.9
2,203,978	-				+0.7
2,204,047	+				-1.5
2,204,386	-		Dshi_2084	0.28	-0.2
2,204,462	+		Dshi_2084	0.36	+0.8
2,204,559	+		Dshi_2084	0.45	-0.8
2,204,564	+		Dshi_2084	0.45	-0.1
2,204,567	-		Dshi_2084	0.45	-1.0
2,204,596	+		Dshi_2084	0.48	-3.0
2,204,631	-		Dshi_2084	0.51	+0.6
2,204,644	+		Dshi_2084	0.53	+0.9
2,204,665	-		Dshi_2084	0.54	-0.1
2,204,666	-		Dshi_2084	0.55	-0.1
2,204,677	-		Dshi_2084	0.56	-2.8
2,204,727	+		Dshi_2084	0.60	-2.3
2,204,735	-		Dshi_2084	0.61	+0.5
2,204,748	+		Dshi_2084	0.62	-0.8
2,204,756	-		Dshi_2084	0.63	-1.9
2,204,783	-		Dshi_2084	0.65	-0.5
2,204,783	-		Dshi_2084	0.65	-0.3
2,204,856	+		Dshi_2084	0.72	-0.3
2,204,961	+		Dshi_2084	0.82	+0.4
2,204,969	-		Dshi_2084	0.83	+1.1
2,204,969	-		Dshi_2084	0.83	-1.0
2,204,969	-		Dshi_2084	0.83	-0.4
2,204,969	-		Dshi_2084	0.83	-1.8
2,204,989	-		Dshi_2084	0.85	+0.4
2,205,003	+		Dshi_2084	0.86	-0.4
2,205,007	+		Dshi_2084	0.86	-0.7
2,205,014	+		Dshi_2084	0.87	+1.4
2,205,020	-		Dshi_2084	0.88	+0.5
2,205,023	-		Dshi_2084	0.88	-0.2
2,205,024	+		Dshi_2084	0.88	+0.3
2,205,040	+		Dshi_2084	0.89	-0.4
2,205,045	+		Dshi_2084	0.90	+0.6
2,205,080	+				-0.6
2,205,088	-				+0.5
2,205,102	+				-0.1
2,205,102	-				-0.5
2,205,120	+				+0.1
2,205,121	-				-0.8
2,205,128	+				-0.0
2,205,129	+				-1.8
2,205,130	+				+1.1
2,205,137	-				-1.2
2,205,138	-				+0.5
2,205,138	-				+0.0
2,205,138	-				+1.1
2,205,145	-				-0.4
2,205,155	+				+0.3
2,205,155	+				+0.3
2,205,155	+				-0.0
2,205,155	+				+0.5
2,205,155	+				-1.2
2,205,155	+				+1.0
2,205,155	+				+0.1
2,205,155	+				+0.1
2,205,155	+				+0.1
2,205,158	-				-0.4
2,205,163	-				-1.3
2,205,163	-				-0.4
2,205,163	-				+0.2
2,205,163	-				+1.1
2,205,163	-				+0.4
2,205,163	-				-0.4
2,205,174	+				+1.1
2,205,175	+				+0.4
2,205,183	-				-1.1
2,205,184	+				-0.1
2,205,186	+				+0.1
2,205,192	-				+0.7
2,205,204	+				+0.7
2,205,220	+				-0.4
2,205,248	+				-0.5
2,205,290	+				-0.0
2,205,290	+				+0.8
2,205,292	+				-0.1
2,205,298	-				-0.9
2,205,300	-				-0.5
2,205,300	-				+0.2
2,205,300	-				+0.0
2,205,300	-				-2.3
2,205,318	+				-1.6
2,205,326	+				-0.4
2,205,326	+				+0.3
2,205,326	-				-1.6
2,205,334	-				-0.3
2,205,334	-				-0.3
2,205,334	-				-0.9
2,205,334	-				-0.0
2,205,334	-				-0.8
2,205,334	-				+0.1
2,205,334	-				+0.2
2,205,334	-				-0.4
2,205,334	-				-0.2
2,205,348	+				+0.4
2,205,349	+				-0.1
2,205,349	+				+0.4
2,205,349	+				+1.0
2,205,349	+				+0.2
2,205,357	-				+0.0
2,205,357	-				-0.3
2,205,357	-				-0.6
2,205,357	-				+0.8
2,205,357	-				-0.4
2,205,359	+				-0.1
2,205,374	-				-0.8
2,205,428	+				+0.3
2,205,428	+				-0.5
2,205,436	-				+1.3
2,205,457	+				+0.1
2,205,457	+				-0.4
2,205,460	-				+0.2
2,205,460	-				-0.8
2,205,462	+				-0.0
2,205,462	-				-0.4
2,205,465	+				+0.7
2,205,465	-				-0.3
2,205,465	-				-0.3
2,205,465	-				-1.8
2,205,465	-				+0.3
2,205,469	+				-0.3
2,205,469	+				-0.4
2,205,469	+				-0.5
2,205,469	+				+0.1
2,205,469	+				+0.6
2,205,475	+				+0.8
2,205,475	+				+1.2
2,205,475	+				+1.0
2,205,475	+				+0.3
2,205,475	+				-0.2
2,205,475	+				+0.6
2,205,475	+				+0.8
2,205,475	+				+0.4
2,205,475	+				+0.6
2,205,475	+				-0.3
2,205,475	+				-0.5
2,205,475	+				+0.7
2,205,475	+				-0.9
2,205,475	+				-0.4
2,205,475	+				-0.7
2,205,475	+				+0.5
2,205,475	+				-0.8
2,205,475	+				+0.2
2,205,475	+				-0.4
2,205,475	+				-0.2
2,205,475	+				+1.2
2,205,477	-				-0.1
2,205,477	-				+0.2
2,205,480	+				-0.1
2,205,483	-				-1.0
2,205,483	-				-1.3
2,205,483	-				-1.1
2,205,483	-				-0.6
2,205,483	-				-0.5
2,205,483	-				-0.2
2,205,483	-				-0.6
2,205,483	-				+0.0
2,205,483	-				-2.3
2,205,483	-				+0.3
2,205,483	-				-0.4
2,205,483	-				+0.3
2,205,483	-				+2.1
2,205,483	-				-0.4
2,205,483	-				+1.0
2,205,483	-				-0.2
2,205,483	-				-0.5
2,205,483	-				+0.3
2,205,483	-				+0.1
2,205,483	-				-2.8
2,205,483	-				-0.3
2,205,483	-				+2.5
2,205,483	-				-0.4
2,205,483	-				-0.3
2,205,483	-				+0.7
2,205,483	-				-0.3
2,205,483	-				-0.6
2,205,483	-				-0.5
2,205,483	-				-0.2
2,205,483	-				-0.6
2,205,483	-				-0.5
2,205,483	-				-0.5
2,205,483	-				-0.3
2,205,524	-				+0.1
2,205,529	+				-0.1
2,205,531	+				-0.2
2,205,542	+				-1.6
2,205,553	-				+0.1
2,205,554	-				+0.1
2,205,560	+				+0.6
2,205,570	+				+0.0
2,205,570	+				+0.4
2,205,598	+				-0.1
2,205,616	+				-0.3
2,205,616	+				-0.6
2,205,616	-				+0.6
2,205,631	-				-2.5
2,205,634	-		Dshi_2085	0.10	+0.4
2,205,644	-		Dshi_2085	0.11	-0.9
2,205,666	-		Dshi_2085	0.14	-0.9
2,205,725	-		Dshi_2085	0.22	-0.8
2,205,736	+		Dshi_2085	0.24	-0.3
2,205,750	+		Dshi_2085	0.25	-0.8
2,205,769	+		Dshi_2085	0.28	+0.3
2,205,793	+		Dshi_2085	0.31	-0.4
2,205,800	-		Dshi_2085	0.32	+0.7
2,205,808	-		Dshi_2085	0.33	-0.1
2,205,811	+		Dshi_2085	0.34	+1.1
2,205,819	-		Dshi_2085	0.35	-0.4
2,205,839	+		Dshi_2085	0.37	-0.0
2,205,870	-		Dshi_2085	0.41	-1.1
2,205,891	+		Dshi_2085	0.44	-0.9
2,205,945	+		Dshi_2085	0.51	+0.2
2,205,953	-		Dshi_2085	0.53	+0.0
2,206,020	+		Dshi_2085	0.61	-0.1
2,206,028	+		Dshi_2085	0.63	-0.6
2,206,048	+		Dshi_2085	0.65	-0.8
2,206,050	-		Dshi_2085	0.65	-2.1
2,206,062	+		Dshi_2085	0.67	-0.6
2,206,080	-		Dshi_2085	0.69	-0.8
2,206,118	+		Dshi_2085	0.75	-0.6
2,206,125	+		Dshi_2085	0.75	-0.5
2,206,126	-		Dshi_2085	0.76	-0.2
2,206,133	+		Dshi_2085	0.77	-0.0
2,206,133	-		Dshi_2085	0.77	-1.5
2,206,145	+		Dshi_2085	0.78	-1.2