Strain Fitness in Shewanella amazonensis SB2B around Sama_2235

Experiment: Adenosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (N)
2,698,126	+				+0.4
2,698,126	+				-0.9
2,698,127	-				+1.0
2,698,127	-				-0.7
2,698,127	-				-1.2
2,698,139	+				-0.6
2,698,140	-				-0.4
2,698,144	+				-0.4
2,698,144	+				-0.4
2,698,144	+				+2.8
2,698,145	-				-0.4
2,698,145	-				-0.4
2,698,145	-				-0.1
2,698,145	-				-0.2
2,698,145	-				-0.4
2,698,145	-				+0.2
2,698,145	-				-0.3
2,698,145	-				+0.2
2,698,145	-				-1.2
2,698,178	+				-1.2
2,698,221	+				+0.1
2,698,230	-				+0.9
2,698,230	-				+1.1
2,698,230	-				+0.5
2,698,272	+				-0.3
2,698,272	+				-0.8
2,698,272	+				-0.4
2,698,326	+				-1.3
2,698,326	+				+1.6
2,698,326	+				+1.2
2,698,326	+				+1.2
2,698,326	+				-1.1
2,698,327	-				-0.9
2,698,327	-				-1.6
2,698,338	+				-1.3
2,698,338	+				-1.0
2,698,338	+				-0.8
2,698,338	+				-0.7
2,698,338	+				-0.8
2,698,339	-				-1.0
2,698,383	+				-0.6
2,698,383	+				-1.5
2,698,452	-		Sama_2234	0.20	-1.6
2,698,487	+		Sama_2234	0.25	+2.5
2,698,624	+		Sama_2234	0.48	+1.1
2,698,624	+		Sama_2234	0.48	+1.2
2,698,624	+		Sama_2234	0.48	+0.9
2,698,625	-		Sama_2234	0.48	+1.5
2,698,660	-		Sama_2234	0.54	-1.8
2,698,696	+		Sama_2234	0.60	+0.7
2,698,697	-		Sama_2234	0.60	-1.2
2,698,697	-		Sama_2234	0.60	-1.0
2,698,697	-		Sama_2234	0.60	+0.2
2,698,697	-		Sama_2234	0.60	-0.0
2,698,697	-		Sama_2234	0.60	-2.5
2,698,697	-		Sama_2234	0.60	+0.1
2,698,822	+		Sama_2234	0.80	+2.8
2,698,829	+		Sama_2234	0.81	-1.3
2,698,830	-		Sama_2234	0.82	+4.0
2,698,830	-		Sama_2234	0.82	-1.4
2,698,848	+		Sama_2234	0.85	-0.5
2,698,874	+		Sama_2234	0.89	+0.1
2,698,898	-				-1.4
2,698,932	+				+1.1
2,698,933	-				+0.1
2,698,933	-				+0.2
2,698,933	-				-2.2
2,698,940	-				-2.5
2,698,940	-				+0.3
2,698,946	+				+0.7
2,698,953	+				+2.6
2,698,953	+				-1.2
2,698,974	-				+0.3
2,698,974	-				-1.6
2,698,989	+				-0.9
2,698,989	+				+0.4
2,698,989	+				-1.8
2,698,990	-				+3.1
2,698,994	+				-0.3
2,698,994	+				+0.6
2,698,994	+				-0.2
2,698,994	+				+0.2
2,698,994	+				-0.6
2,698,995	-				-1.3
2,698,995	-				+0.7
2,698,995	-				+1.0
2,699,046	+				-1.0
2,699,046	+				+0.8
2,699,047	-				-0.3
2,699,047	-				+2.4
2,699,047	-				-1.4
2,699,047	-				-0.8
2,699,049	+				+1.0
2,699,049	+				-0.7
2,699,049	+				+0.2
2,699,049	+				+0.5
2,699,049	+				-0.3
2,699,049	+				-0.5
2,699,050	-				-0.6
2,699,050	-				-0.3
2,699,050	-				+0.7
2,699,050	-				-0.1
2,699,054	+				-1.4
2,699,054	+				-1.3
2,699,054	+				-0.8
2,699,055	-				+1.6
2,699,055	-				+0.3
2,699,078	+				+0.6
2,699,079	-				-0.4
2,699,090	+				+0.5
2,699,156	+		Sama_2235	0.12	-1.6
2,699,156	+		Sama_2235	0.12	-0.5
2,699,156	+		Sama_2235	0.12	-0.6
2,699,227	+		Sama_2235	0.19	-0.4
2,699,243	+		Sama_2235	0.20	+0.2
2,699,244	-		Sama_2235	0.20	+0.4
2,699,357	+		Sama_2235	0.32	+0.1
2,699,358	-		Sama_2235	0.32	-1.0
2,699,361	-		Sama_2235	0.32	-2.2
2,699,374	+		Sama_2235	0.33	-0.9
2,699,375	-		Sama_2235	0.33	-1.9
2,699,405	-		Sama_2235	0.36	-1.0
2,699,417	-		Sama_2235	0.38	-0.2
2,699,496	+		Sama_2235	0.45	-0.2
2,699,497	-		Sama_2235	0.46	-1.5
2,699,503	+		Sama_2235	0.46	+0.6
2,699,547	+		Sama_2235	0.51	+0.2
2,699,547	+		Sama_2235	0.51	-1.4
2,699,547	+		Sama_2235	0.51	-1.4
2,699,547	+		Sama_2235	0.51	-0.3
2,699,547	+		Sama_2235	0.51	-0.5
2,699,548	-		Sama_2235	0.51	+2.4
2,699,548	-		Sama_2235	0.51	+0.1
2,699,589	+		Sama_2235	0.55	-0.3
2,699,589	+		Sama_2235	0.55	-0.8
2,699,609	+		Sama_2235	0.57	+0.7
2,699,673	+		Sama_2235	0.63	-1.9
2,699,674	-		Sama_2235	0.63	+0.5
2,699,674	-		Sama_2235	0.63	-1.0
2,699,688	-		Sama_2235	0.65	-0.4
2,699,717	-		Sama_2235	0.67	-0.2
2,699,748	+		Sama_2235	0.71	-0.7
2,699,773	-		Sama_2235	0.73	+0.7
2,699,820	-		Sama_2235	0.78	-0.6
2,699,820	-		Sama_2235	0.78	-0.7
2,699,820	-		Sama_2235	0.78	+0.9
2,699,820	-		Sama_2235	0.78	-2.4
2,699,934	+		Sama_2235	0.89	-0.7
2,699,934	+		Sama_2235	0.89	-2.5
2,699,935	-		Sama_2235	0.89	-2.2
2,699,935	-		Sama_2235	0.89	-0.9
2,699,935	-		Sama_2235	0.89	-0.9
2,699,935	-		Sama_2235	0.89	-2.0
2,699,935	-		Sama_2235	0.89	+2.9
2,699,935	-		Sama_2235	0.89	-0.4
2,700,036	-				-0.2
2,700,057	+				-1.2
2,700,058	-				-0.2
2,700,058	-				-1.8
2,700,067	+				+2.2
2,700,068	-				-1.8
2,700,068	-				-1.9
2,700,077	+				-2.5
2,700,078	-				+1.0
2,700,078	-				+1.0
2,700,078	-				-0.4
2,700,089	-				+0.2
2,700,090	+				-1.6
2,700,091	-				-0.0
2,700,091	-				-0.2
2,700,135	-				+0.6
2,700,135	-				+0.0
2,700,135	-				-2.5
2,700,140	-				+0.7
2,700,140	-				-0.6
2,700,142	+				-0.8
2,700,142	+				+0.7
2,700,142	+				-0.1
2,700,142	+				+0.6
2,700,234	-		Sama_2236	0.11	+1.2
2,700,295	-		Sama_2236	0.16	+0.7
2,700,295	-		Sama_2236	0.16	-0.7
2,700,312	-		Sama_2236	0.17	-1.1
2,700,312	-		Sama_2236	0.17	+0.3
2,700,323	+		Sama_2236	0.18	-1.3
2,700,324	-		Sama_2236	0.18	+0.4
2,700,324	-		Sama_2236	0.18	-0.9
2,700,447	-		Sama_2236	0.27	+0.9
2,700,447	-		Sama_2236	0.27	-0.2
2,700,447	-		Sama_2236	0.27	-1.5
2,700,538	-		Sama_2236	0.33	-1.4
2,700,538	-		Sama_2236	0.33	-0.8
2,700,560	+		Sama_2236	0.35	-0.9
2,700,560	+		Sama_2236	0.35	-1.0
2,700,561	-		Sama_2236	0.35	-0.4
2,700,629	+		Sama_2236	0.40	-1.6
2,700,630	-		Sama_2236	0.40	-0.1
2,700,674	-		Sama_2236	0.43	+1.1
2,700,677	+		Sama_2236	0.44	-1.0
2,700,677	+		Sama_2236	0.44	-2.0
2,700,678	-		Sama_2236	0.44	+1.1
2,700,678	-		Sama_2236	0.44	-1.2
2,700,678	-		Sama_2236	0.44	+2.4
2,700,678	-		Sama_2236	0.44	-1.6
2,700,716	+		Sama_2236	0.47	-1.0
2,700,755	+		Sama_2236	0.49	-2.3
2,700,811	+		Sama_2236	0.53	-0.1
2,700,812	-		Sama_2236	0.54	+0.4
2,700,880	+		Sama_2236	0.59	-0.7
2,700,929	+		Sama_2236	0.62	-2.2
2,700,930	-		Sama_2236	0.62	+3.2
2,700,989	+		Sama_2236	0.67	-0.3
2,701,010	+		Sama_2236	0.68	-0.3
2,701,010	+		Sama_2236	0.68	-1.0
2,701,011	-		Sama_2236	0.68	-0.1