Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_1698 and Sama_1699 are separated by 397 nucleotides Sama_1699 and Sama_1700 are separated by 39 nucleotides
Sama_1698: Sama_1698 - hypothetical protein (RefSeq), at 2,078,569 to 2,079,951
_1698
Sama_1699: Sama_1699 - elongation factor P (RefSeq), at 2,080,349 to 2,080,915
_1699
Sama_1700: Sama_1700 - hypothetical protein (RefSeq), at 2,080,955 to 2,082,121
_1700
Position (kb)
2080
2081 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2079.401 kb on - strand, within Sama_1698 at 2079.458 kb on - strand, within Sama_1698 at 2079.460 kb on + strand, within Sama_1698 at 2079.460 kb on + strand, within Sama_1698 at 2079.460 kb on + strand, within Sama_1698 at 2079.461 kb on - strand, within Sama_1698 at 2079.543 kb on + strand, within Sama_1698 at 2079.601 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.605 kb on + strand, within Sama_1698 at 2079.606 kb on - strand, within Sama_1698 at 2079.617 kb on + strand, within Sama_1698 at 2079.617 kb on + strand, within Sama_1698 at 2079.617 kb on + strand, within Sama_1698 at 2079.625 kb on + strand, within Sama_1698 at 2079.625 kb on + strand, within Sama_1698 at 2079.625 kb on + strand, within Sama_1698 at 2079.627 kb on + strand, within Sama_1698 at 2079.627 kb on + strand, within Sama_1698 at 2079.627 kb on + strand, within Sama_1698 at 2079.627 kb on + strand, within Sama_1698 at 2079.864 kb on + strand at 2079.975 kb on - strand at 2080.015 kb on - strand at 2080.030 kb on + strand at 2080.073 kb on - strand at 2080.075 kb on + strand at 2080.075 kb on + strand at 2080.075 kb on + strand at 2080.075 kb on + strand at 2080.076 kb on - strand at 2080.101 kb on + strand at 2080.101 kb on + strand at 2080.198 kb on + strand at 2080.199 kb on - strand at 2080.215 kb on + strand at 2080.215 kb on + strand at 2080.216 kb on - strand at 2080.234 kb on - strand at 2080.249 kb on + strand at 2080.339 kb on - strand at 2080.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,079,401 - Sama_1698 0.60 -2.8 2,079,458 - Sama_1698 0.64 -0.5 2,079,460 + Sama_1698 0.64 +0.3 2,079,460 + Sama_1698 0.64 +1.7 2,079,460 + Sama_1698 0.64 +0.5 2,079,461 - Sama_1698 0.64 +2.3 2,079,543 + Sama_1698 0.70 +0.1 2,079,601 + Sama_1698 0.75 +2.5 2,079,605 + Sama_1698 0.75 -1.5 2,079,605 + Sama_1698 0.75 +0.9 2,079,605 + Sama_1698 0.75 -0.1 2,079,605 + Sama_1698 0.75 +0.9 2,079,605 + Sama_1698 0.75 +0.1 2,079,605 + Sama_1698 0.75 +0.2 2,079,605 + Sama_1698 0.75 -1.0 2,079,606 - Sama_1698 0.75 -0.1 2,079,617 + Sama_1698 0.76 +1.7 2,079,617 + Sama_1698 0.76 +0.9 2,079,617 + Sama_1698 0.76 -0.2 2,079,625 + Sama_1698 0.76 +0.3 2,079,625 + Sama_1698 0.76 -1.4 2,079,625 + Sama_1698 0.76 +0.3 2,079,627 + Sama_1698 0.77 +0.5 2,079,627 + Sama_1698 0.77 +0.3 2,079,627 + Sama_1698 0.77 -0.5 2,079,627 + Sama_1698 0.77 -0.7 2,079,864 + +2.2 2,079,975 - -0.2 2,080,015 - +0.0 2,080,030 + -0.0 2,080,073 - -0.7 2,080,075 + +0.7 2,080,075 + -0.3 2,080,075 + -0.5 2,080,075 + -2.3 2,080,076 - +0.6 2,080,101 + -0.8 2,080,101 + -0.5 2,080,198 + -0.7 2,080,199 - -2.7 2,080,215 + -1.9 2,080,215 + +0.3 2,080,216 - +1.1 2,080,234 - -0.9 2,080,249 + +0.6 2,080,339 - +3.3 2,080,339 - +3.2
Or see this region's nucleotide sequence