Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0566 and Sama_0567 are separated by 87 nucleotides Sama_0567 and Sama_0568 are separated by 3 nucleotides
Sama_0566: Sama_0566 - hypothetical protein (RefSeq), at 705,114 to 706,226
_0566
Sama_0567: Sama_0567 - hypothetical protein (RefSeq), at 706,314 to 706,658
_0567
Sama_0568: Sama_0568 - hypothetical protein (RefSeq), at 706,662 to 708,332
_0568
Position (kb) 706
707 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 705.346 kb on + strand, within Sama_0566 at 705.347 kb on - strand, within Sama_0566 at 705.429 kb on - strand, within Sama_0566 at 705.466 kb on - strand, within Sama_0566 at 705.466 kb on - strand, within Sama_0566 at 705.466 kb on - strand, within Sama_0566 at 705.471 kb on - strand, within Sama_0566 at 705.491 kb on + strand, within Sama_0566 at 705.491 kb on + strand, within Sama_0566 at 705.492 kb on - strand, within Sama_0566 at 705.492 kb on - strand, within Sama_0566 at 705.560 kb on + strand, within Sama_0566 at 705.560 kb on + strand, within Sama_0566 at 705.560 kb on + strand, within Sama_0566 at 705.561 kb on - strand, within Sama_0566 at 705.561 kb on - strand, within Sama_0566 at 705.561 kb on - strand, within Sama_0566 at 705.561 kb on - strand, within Sama_0566 at 705.614 kb on + strand, within Sama_0566 at 705.615 kb on - strand, within Sama_0566 at 705.659 kb on + strand, within Sama_0566 at 705.660 kb on - strand, within Sama_0566 at 705.660 kb on - strand, within Sama_0566 at 705.660 kb on - strand, within Sama_0566 at 705.660 kb on - strand, within Sama_0566 at 705.664 kb on + strand, within Sama_0566 at 705.665 kb on - strand, within Sama_0566 at 705.715 kb on + strand, within Sama_0566 at 705.723 kb on + strand, within Sama_0566 at 705.724 kb on - strand, within Sama_0566 at 705.739 kb on - strand, within Sama_0566 at 705.776 kb on + strand, within Sama_0566 at 705.776 kb on + strand, within Sama_0566 at 705.776 kb on + strand, within Sama_0566 at 705.777 kb on - strand, within Sama_0566 at 705.777 kb on - strand, within Sama_0566 at 705.778 kb on + strand, within Sama_0566 at 705.779 kb on - strand, within Sama_0566 at 705.813 kb on - strand, within Sama_0566 at 705.839 kb on + strand, within Sama_0566 at 705.881 kb on + strand, within Sama_0566 at 705.881 kb on + strand, within Sama_0566 at 705.974 kb on - strand, within Sama_0566 at 705.974 kb on - strand, within Sama_0566 at 705.974 kb on - strand, within Sama_0566 at 705.983 kb on + strand, within Sama_0566 at 705.983 kb on + strand, within Sama_0566 at 705.983 kb on + strand, within Sama_0566 at 705.984 kb on - strand, within Sama_0566 at 705.984 kb on - strand, within Sama_0566 at 705.984 kb on - strand, within Sama_0566 at 706.098 kb on + strand, within Sama_0566 at 706.099 kb on - strand, within Sama_0566 at 706.099 kb on - strand, within Sama_0566 at 706.119 kb on + strand at 706.120 kb on - strand at 706.138 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.269 kb on + strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.270 kb on - strand at 706.276 kb on + strand at 706.304 kb on - strand at 706.379 kb on + strand, within Sama_0567 at 706.379 kb on + strand, within Sama_0567 at 706.379 kb on + strand, within Sama_0567 at 706.379 kb on + strand, within Sama_0567 at 706.380 kb on - strand, within Sama_0567 at 706.380 kb on - strand, within Sama_0567 at 706.380 kb on - strand, within Sama_0567 at 706.380 kb on - strand, within Sama_0567 at 706.380 kb on - strand, within Sama_0567 at 706.479 kb on + strand, within Sama_0567 at 706.480 kb on - strand, within Sama_0567 at 706.519 kb on + strand, within Sama_0567 at 706.582 kb on - strand, within Sama_0567 at 706.582 kb on - strand, within Sama_0567 at 706.582 kb on - strand, within Sama_0567 at 706.626 kb on + strand at 706.626 kb on + strand at 706.626 kb on + strand at 706.627 kb on - strand at 706.679 kb on - strand at 706.688 kb on - strand at 706.688 kb on - strand at 706.713 kb on + strand at 706.713 kb on + strand at 706.713 kb on + strand at 706.713 kb on + strand at 706.713 kb on + strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.714 kb on - strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.715 kb on + strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.716 kb on - strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.758 kb on + strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.759 kb on - strand at 706.760 kb on + strand at 706.761 kb on - strand at 706.761 kb on - strand at 706.761 kb on - strand at 706.761 kb on - strand at 706.790 kb on + strand at 706.790 kb on + strand at 706.800 kb on + strand at 706.800 kb on + strand at 706.816 kb on + strand at 706.817 kb on - strand at 706.817 kb on - strand at 706.819 kb on + strand at 706.819 kb on + strand at 706.819 kb on + strand at 706.819 kb on + strand at 706.819 kb on + strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.820 kb on - strand at 706.824 kb on - strand at 706.907 kb on + strand, within Sama_0568 at 706.907 kb on + strand, within Sama_0568 at 706.907 kb on + strand, within Sama_0568 at 706.907 kb on + strand, within Sama_0568 at 706.907 kb on + strand, within Sama_0568 at 706.907 kb on + strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.908 kb on - strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.920 kb on + strand, within Sama_0568 at 706.921 kb on - strand, within Sama_0568 at 706.921 kb on - strand, within Sama_0568 at 706.921 kb on - strand, within Sama_0568 at 706.926 kb on - strand, within Sama_0568 at 706.926 kb on - strand, within Sama_0568 at 707.100 kb on + strand, within Sama_0568 at 707.168 kb on + strand, within Sama_0568 at 707.168 kb on + strand, within Sama_0568 at 707.168 kb on + strand, within Sama_0568 at 707.168 kb on + strand, within Sama_0568 at 707.169 kb on - strand, within Sama_0568 at 707.237 kb on + strand, within Sama_0568 at 707.263 kb on + strand, within Sama_0568 at 707.264 kb on - strand, within Sama_0568 at 707.264 kb on - strand, within Sama_0568 at 707.264 kb on - strand, within Sama_0568 at 707.269 kb on - strand, within Sama_0568 at 707.269 kb on - strand, within Sama_0568 at 707.351 kb on + strand, within Sama_0568 at 707.351 kb on + strand, within Sama_0568 at 707.411 kb on + strand, within Sama_0568 at 707.430 kb on + strand, within Sama_0568 at 707.430 kb on + strand, within Sama_0568 at 707.430 kb on + strand, within Sama_0568 at 707.431 kb on - strand, within Sama_0568 at 707.431 kb on - strand, within Sama_0568 at 707.459 kb on + strand, within Sama_0568 at 707.463 kb on + strand, within Sama_0568 at 707.463 kb on + strand, within Sama_0568 at 707.464 kb on - strand, within Sama_0568 at 707.464 kb on - strand, within Sama_0568 at 707.464 kb on - strand, within Sama_0568 at 707.464 kb on - strand, within Sama_0568 at 707.464 kb on - strand, within Sama_0568 at 707.494 kb on + strand, within Sama_0568 at 707.494 kb on + strand, within Sama_0568 at 707.494 kb on + strand, within Sama_0568 at 707.494 kb on + strand, within Sama_0568 at 707.495 kb on - strand, within Sama_0568 at 707.583 kb on + strand, within Sama_0568 at 707.631 kb on + strand, within Sama_0568 at 707.631 kb on + strand, within Sama_0568
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 705,346 + Sama_0566 0.21 +0.4 705,347 - Sama_0566 0.21 -0.8 705,429 - Sama_0566 0.28 +0.5 705,466 - Sama_0566 0.32 +0.0 705,466 - Sama_0566 0.32 -0.1 705,466 - Sama_0566 0.32 -1.6 705,471 - Sama_0566 0.32 +0.2 705,491 + Sama_0566 0.34 -0.2 705,491 + Sama_0566 0.34 +0.4 705,492 - Sama_0566 0.34 -0.6 705,492 - Sama_0566 0.34 +0.9 705,560 + Sama_0566 0.40 -0.4 705,560 + Sama_0566 0.40 -1.9 705,560 + Sama_0566 0.40 -1.7 705,561 - Sama_0566 0.40 -0.5 705,561 - Sama_0566 0.40 -0.1 705,561 - Sama_0566 0.40 -1.2 705,561 - Sama_0566 0.40 -0.5 705,614 + Sama_0566 0.45 -0.7 705,615 - Sama_0566 0.45 -1.3 705,659 + Sama_0566 0.49 +0.1 705,660 - Sama_0566 0.49 -1.8 705,660 - Sama_0566 0.49 +0.0 705,660 - Sama_0566 0.49 +0.6 705,660 - Sama_0566 0.49 +0.5 705,664 + Sama_0566 0.49 -0.1 705,665 - Sama_0566 0.50 +0.7 705,715 + Sama_0566 0.54 +2.8 705,723 + Sama_0566 0.55 +1.3 705,724 - Sama_0566 0.55 -0.2 705,739 - Sama_0566 0.56 -2.4 705,776 + Sama_0566 0.59 +1.3 705,776 + Sama_0566 0.59 +0.0 705,776 + Sama_0566 0.59 +0.3 705,777 - Sama_0566 0.60 +1.5 705,777 - Sama_0566 0.60 -2.1 705,778 + Sama_0566 0.60 +0.3 705,779 - Sama_0566 0.60 -1.9 705,813 - Sama_0566 0.63 +0.1 705,839 + Sama_0566 0.65 -0.1 705,881 + Sama_0566 0.69 -1.4 705,881 + Sama_0566 0.69 +0.8 705,974 - Sama_0566 0.77 +0.1 705,974 - Sama_0566 0.77 -2.8 705,974 - Sama_0566 0.77 -0.6 705,983 + Sama_0566 0.78 +0.3 705,983 + Sama_0566 0.78 +0.3 705,983 + Sama_0566 0.78 -1.4 705,984 - Sama_0566 0.78 +2.0 705,984 - Sama_0566 0.78 -0.8 705,984 - Sama_0566 0.78 -1.0 706,098 + Sama_0566 0.88 -1.5 706,099 - Sama_0566 0.88 +1.5 706,099 - Sama_0566 0.88 -1.0 706,119 + +1.1 706,120 - +0.4 706,138 + -0.8 706,269 + +0.9 706,269 + +0.0 706,269 + +0.8 706,269 + +0.5 706,269 + -2.3 706,269 + -0.4 706,269 + -0.2 706,269 + -0.7 706,270 - +0.0 706,270 - +0.9 706,270 - +1.3 706,270 - -0.8 706,270 - +1.9 706,270 - +2.0 706,270 - +0.4 706,270 - +0.3 706,270 - +0.2 706,276 + -1.0 706,304 - -0.1 706,379 + Sama_0567 0.19 -0.1 706,379 + Sama_0567 0.19 +1.5 706,379 + Sama_0567 0.19 -0.8 706,379 + Sama_0567 0.19 -0.4 706,380 - Sama_0567 0.19 -0.6 706,380 - Sama_0567 0.19 +0.8 706,380 - Sama_0567 0.19 -2.1 706,380 - Sama_0567 0.19 -1.0 706,380 - Sama_0567 0.19 -0.9 706,479 + Sama_0567 0.48 +0.2 706,480 - Sama_0567 0.48 -1.7 706,519 + Sama_0567 0.59 -0.1 706,582 - Sama_0567 0.78 -1.1 706,582 - Sama_0567 0.78 -0.6 706,582 - Sama_0567 0.78 -1.2 706,626 + -1.3 706,626 + -0.7 706,626 + -0.0 706,627 - +2.4 706,679 - -1.0 706,688 - -0.4 706,688 - -1.2 706,713 + +0.7 706,713 + +1.0 706,713 + +2.1 706,713 + -1.0 706,713 + -0.4 706,714 - +0.3 706,714 - -1.1 706,714 - -0.2 706,714 - -1.1 706,714 - -1.3 706,714 - -0.3 706,714 - -1.0 706,715 + -0.1 706,715 + +1.6 706,715 + -0.9 706,715 + -1.2 706,715 + -1.3 706,715 + -0.3 706,715 + -0.9 706,716 - -0.8 706,716 - -0.5 706,716 - -0.7 706,716 - -0.4 706,716 - -0.6 706,716 - -0.5 706,716 - -1.2 706,758 + -0.5 706,758 + +0.1 706,758 + +1.1 706,758 + +2.1 706,758 + -0.8 706,758 + -0.2 706,758 + +0.9 706,758 + +0.3 706,759 - +0.9 706,759 - -1.1 706,759 - +1.1 706,759 - -0.8 706,759 - -0.2 706,759 - +0.2 706,759 - +1.2 706,759 - -0.4 706,759 - -2.0 706,759 - +0.5 706,760 + +0.5 706,761 - -1.0 706,761 - -0.0 706,761 - -2.6 706,761 - +0.5 706,790 + -0.8 706,790 + -0.9 706,800 + +2.1 706,800 + -2.0 706,816 + +0.9 706,817 - -1.6 706,817 - -1.1 706,819 + +0.6 706,819 + -0.7 706,819 + -1.2 706,819 + -0.3 706,819 + -1.2 706,820 - -2.1 706,820 - -1.6 706,820 - -0.6 706,820 - +0.2 706,820 - -1.8 706,820 - -0.3 706,820 - -0.9 706,824 - -0.1 706,907 + Sama_0568 0.15 -0.1 706,907 + Sama_0568 0.15 +2.9 706,907 + Sama_0568 0.15 -0.3 706,907 + Sama_0568 0.15 +0.5 706,907 + Sama_0568 0.15 +1.6 706,907 + Sama_0568 0.15 -1.0 706,908 - Sama_0568 0.15 -1.2 706,908 - Sama_0568 0.15 -1.0 706,908 - Sama_0568 0.15 -0.6 706,908 - Sama_0568 0.15 +0.1 706,908 - Sama_0568 0.15 +1.9 706,908 - Sama_0568 0.15 +0.7 706,908 - Sama_0568 0.15 +1.5 706,908 - Sama_0568 0.15 +1.3 706,920 + Sama_0568 0.15 -0.9 706,920 + Sama_0568 0.15 -0.1 706,920 + Sama_0568 0.15 -0.6 706,920 + Sama_0568 0.15 -2.4 706,920 + Sama_0568 0.15 +0.7 706,920 + Sama_0568 0.15 -1.8 706,920 + Sama_0568 0.15 +0.7 706,921 - Sama_0568 0.15 +0.6 706,921 - Sama_0568 0.15 +2.6 706,921 - Sama_0568 0.15 +0.4 706,926 - Sama_0568 0.16 -0.2 706,926 - Sama_0568 0.16 -1.6 707,100 + Sama_0568 0.26 -1.0 707,168 + Sama_0568 0.30 -0.5 707,168 + Sama_0568 0.30 -1.0 707,168 + Sama_0568 0.30 +1.0 707,168 + Sama_0568 0.30 -0.4 707,169 - Sama_0568 0.30 -0.3 707,237 + Sama_0568 0.34 -1.0 707,263 + Sama_0568 0.36 -0.3 707,264 - Sama_0568 0.36 -0.8 707,264 - Sama_0568 0.36 -0.9 707,264 - Sama_0568 0.36 -0.1 707,269 - Sama_0568 0.36 +0.2 707,269 - Sama_0568 0.36 -0.6 707,351 + Sama_0568 0.41 +1.0 707,351 + Sama_0568 0.41 -1.1 707,411 + Sama_0568 0.45 -0.3 707,430 + Sama_0568 0.46 -0.7 707,430 + Sama_0568 0.46 -1.4 707,430 + Sama_0568 0.46 -0.5 707,431 - Sama_0568 0.46 -0.6 707,431 - Sama_0568 0.46 -1.3 707,459 + Sama_0568 0.48 +0.2 707,463 + Sama_0568 0.48 -1.0 707,463 + Sama_0568 0.48 +3.5 707,464 - Sama_0568 0.48 +0.2 707,464 - Sama_0568 0.48 -1.5 707,464 - Sama_0568 0.48 +0.6 707,464 - Sama_0568 0.48 -0.0 707,464 - Sama_0568 0.48 -0.6 707,494 + Sama_0568 0.50 -0.4 707,494 + Sama_0568 0.50 -1.0 707,494 + Sama_0568 0.50 -1.6 707,494 + Sama_0568 0.50 -1.2 707,495 - Sama_0568 0.50 -0.5 707,583 + Sama_0568 0.55 +0.2 707,631 + Sama_0568 0.58 +2.6 707,631 + Sama_0568 0.58 +2.1
Or see this region's nucleotide sequence