Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0757 and Dshi_0758 are separated by 164 nucleotides Dshi_0758 and Dshi_0759 are separated by 82 nucleotides Dshi_0759 and Dshi_0760 are separated by 501 nucleotides
Dshi_0757: Dshi_0757 - selenium-binding protein (RefSeq), at 767,248 to 768,648
_0757
Dshi_0758: Dshi_0758 - transcriptional regulator, MarR family (RefSeq), at 768,813 to 769,301
_0758
Dshi_0759: Dshi_0759 - hypothetical protein (RefSeq), at 769,384 to 769,752
_0759
Dshi_0760: Dshi_0760 - hypothetical protein (RefSeq), at 770,254 to 770,736
_0760
Position (kb) 769
770 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 768.456 kb on - strand, within Dshi_0757 at 768.458 kb on + strand, within Dshi_0757 at 768.497 kb on - strand, within Dshi_0757 at 768.510 kb on + strand at 768.549 kb on + strand at 768.605 kb on + strand at 768.646 kb on + strand at 768.714 kb on - strand at 768.836 kb on - strand at 768.858 kb on - strand at 768.877 kb on - strand, within Dshi_0758 at 768.951 kb on + strand, within Dshi_0758 at 769.007 kb on - strand, within Dshi_0758 at 769.118 kb on - strand, within Dshi_0758 at 769.118 kb on - strand, within Dshi_0758 at 769.158 kb on + strand, within Dshi_0758 at 769.166 kb on - strand, within Dshi_0758 at 769.172 kb on + strand, within Dshi_0758 at 769.312 kb on + strand at 769.339 kb on + strand at 769.349 kb on + strand at 769.368 kb on - strand at 769.541 kb on + strand, within Dshi_0759 at 769.551 kb on - strand, within Dshi_0759 at 769.551 kb on - strand, within Dshi_0759 at 769.556 kb on + strand, within Dshi_0759 at 769.568 kb on + strand, within Dshi_0759 at 769.618 kb on - strand, within Dshi_0759 at 769.699 kb on + strand, within Dshi_0759 at 770.344 kb on + strand, within Dshi_0760 at 770.539 kb on - strand, within Dshi_0760 at 770.582 kb on - strand, within Dshi_0760 at 770.673 kb on - strand, within Dshi_0760 at 770.673 kb on - strand, within Dshi_0760
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 768,456 - Dshi_0757 0.86 +1.2 768,458 + Dshi_0757 0.86 -0.9 768,497 - Dshi_0757 0.89 +0.2 768,510 + -0.5 768,549 + +0.6 768,605 + -0.2 768,646 + +0.8 768,714 - -1.6 768,836 - +0.8 768,858 - +0.6 768,877 - Dshi_0758 0.13 -0.2 768,951 + Dshi_0758 0.28 -0.1 769,007 - Dshi_0758 0.40 -1.0 769,118 - Dshi_0758 0.62 -3.1 769,118 - Dshi_0758 0.62 -1.1 769,158 + Dshi_0758 0.71 +0.3 769,166 - Dshi_0758 0.72 +0.4 769,172 + Dshi_0758 0.73 -0.1 769,312 + +1.3 769,339 + +0.0 769,349 + +1.2 769,368 - -0.9 769,541 + Dshi_0759 0.43 +0.3 769,551 - Dshi_0759 0.45 +1.0 769,551 - Dshi_0759 0.45 +0.1 769,556 + Dshi_0759 0.47 +0.3 769,568 + Dshi_0759 0.50 +0.3 769,618 - Dshi_0759 0.63 +0.1 769,699 + Dshi_0759 0.85 -1.4 770,344 + Dshi_0760 0.19 -0.5 770,539 - Dshi_0760 0.59 +0.4 770,582 - Dshi_0760 0.68 -0.2 770,673 - Dshi_0760 0.87 -2.7 770,673 - Dshi_0760 0.87 -2.0
Or see this region's nucleotide sequence