Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15440

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
1,607,200	+				-0.1
1,607,208	-				-1.0
1,607,210	+				-0.2
1,607,210	+				+2.1
1,607,212	-				-0.7
1,607,216	+				+0.8
1,607,218	-				+0.6
1,607,218	-				+1.1
1,607,224	-				+0.1
1,607,243	+				-0.4
1,607,348	-				-0.4
1,607,413	+				-0.1
1,607,436	+				-2.0
1,607,452	-				+0.0
1,607,454	-				+0.7
1,607,493	+				-0.6
1,607,501	-				+0.5
1,607,537	+		PGA1_c15440	0.12	+0.8
1,607,537	+		PGA1_c15440	0.12	-0.0
1,607,545	-		PGA1_c15440	0.13	+0.3
1,607,554	-		PGA1_c15440	0.13	+0.1
1,607,581	+		PGA1_c15440	0.15	-0.6
1,607,685	+		PGA1_c15440	0.21	-0.2
1,607,690	+		PGA1_c15440	0.21	+1.1
1,607,690	+		PGA1_c15440	0.21	-1.3
1,607,750	+		PGA1_c15440	0.25	-0.1
1,607,764	-		PGA1_c15440	0.26	-0.6
1,607,795	+		PGA1_c15440	0.28	+0.1
1,607,800	+		PGA1_c15440	0.28	+0.3
1,607,809	+		PGA1_c15440	0.28	+0.4
1,607,878	-		PGA1_c15440	0.33	+1.2
1,607,878	-		PGA1_c15440	0.33	-0.1
1,607,882	+		PGA1_c15440	0.33	-0.8
1,607,941	+		PGA1_c15440	0.36	+1.6
1,607,941	+		PGA1_c15440	0.36	-1.0
1,607,944	-		PGA1_c15440	0.37	+0.9
1,607,955	+		PGA1_c15440	0.37	-0.3
1,607,965	-		PGA1_c15440	0.38	+0.1
1,608,003	-		PGA1_c15440	0.40	+1.1
1,608,003	-		PGA1_c15440	0.40	+1.8
1,608,003	-		PGA1_c15440	0.40	+0.7
1,608,013	-		PGA1_c15440	0.41	+0.8
1,608,022	+		PGA1_c15440	0.41	+1.2
1,608,069	+		PGA1_c15440	0.44	+1.2
1,608,094	+		PGA1_c15440	0.46	+1.2
1,608,131	+		PGA1_c15440	0.48	-0.5
1,608,131	+		PGA1_c15440	0.48	+0.5
1,608,131	+		PGA1_c15440	0.48	+1.7
1,608,139	-		PGA1_c15440	0.48	+1.1
1,608,139	-		PGA1_c15440	0.48	-0.7
1,608,139	-		PGA1_c15440	0.48	+1.1
1,608,178	+		PGA1_c15440	0.51	-0.1
1,608,256	+		PGA1_c15440	0.55	+1.1
1,608,261	+		PGA1_c15440	0.56	-0.0
1,608,269	-		PGA1_c15440	0.56	+0.8
1,608,291	+		PGA1_c15440	0.58	-0.2
1,608,359	-		PGA1_c15440	0.62	-0.6
1,608,365	+		PGA1_c15440	0.62	+0.4
1,608,370	+		PGA1_c15440	0.62	+0.1
1,608,370	+		PGA1_c15440	0.62	-0.3
1,608,370	+		PGA1_c15440	0.62	-0.2
1,608,370	+		PGA1_c15440	0.62	+0.3
1,608,370	+		PGA1_c15440	0.62	-1.6
1,608,370	+		PGA1_c15440	0.62	-0.3
1,608,370	+		PGA1_c15440	0.62	+0.3
1,608,370	+		PGA1_c15440	0.62	-0.1
1,608,378	-		PGA1_c15440	0.63	+0.2
1,608,378	-		PGA1_c15440	0.63	-0.6
1,608,378	-		PGA1_c15440	0.63	-0.2
1,608,378	-		PGA1_c15440	0.63	+0.2
1,608,378	-		PGA1_c15440	0.63	+1.5
1,608,378	-		PGA1_c15440	0.63	-1.3
1,608,378	-		PGA1_c15440	0.63	+1.0
1,608,378	-		PGA1_c15440	0.63	+0.3
1,608,378	-		PGA1_c15440	0.63	+0.8
1,608,378	-		PGA1_c15440	0.63	+1.0
1,608,378	-		PGA1_c15440	0.63	+0.6
1,608,378	-		PGA1_c15440	0.63	+1.9
1,608,378	-		PGA1_c15440	0.63	-0.2
1,608,378	-		PGA1_c15440	0.63	-0.3
1,608,378	-		PGA1_c15440	0.63	+0.8
1,608,378	-		PGA1_c15440	0.63	+0.5
1,608,378	-		PGA1_c15440	0.63	+0.4
1,608,378	-		PGA1_c15440	0.63	+1.0
1,608,388	+		PGA1_c15440	0.63	+1.1
1,608,432	-		PGA1_c15440	0.66	+1.4
1,608,432	-		PGA1_c15440	0.66	+0.6
1,608,432	-		PGA1_c15440	0.66	-0.4
1,608,432	-		PGA1_c15440	0.66	-1.0
1,608,451	-		PGA1_c15440	0.67	+1.8
1,608,457	+		PGA1_c15440	0.68	+0.3
1,608,457	+		PGA1_c15440	0.68	-0.1
1,608,465	-		PGA1_c15440	0.68	-1.3
1,608,473	-		PGA1_c15440	0.68	-3.3
1,608,496	-		PGA1_c15440	0.70	+1.6
1,608,498	+		PGA1_c15440	0.70	-1.9
1,608,501	+		PGA1_c15440	0.70	-1.8
1,608,510	-		PGA1_c15440	0.71	-2.3
1,608,510	-		PGA1_c15440	0.71	+1.6
1,608,510	-		PGA1_c15440	0.71	-0.4
1,608,510	-		PGA1_c15440	0.71	+0.7
1,608,523	+		PGA1_c15440	0.71	+0.2
1,608,526	-		PGA1_c15440	0.72	-0.4
1,608,528	+		PGA1_c15440	0.72	+0.4
1,608,545	+		PGA1_c15440	0.73	-0.1
1,608,545	+		PGA1_c15440	0.73	+0.6
1,608,545	+		PGA1_c15440	0.73	-0.5
1,608,545	+		PGA1_c15440	0.73	+0.6
1,608,545	+		PGA1_c15440	0.73	+0.7
1,608,545	+		PGA1_c15440	0.73	-1.4
1,608,545	+		PGA1_c15440	0.73	+1.6
1,608,553	-		PGA1_c15440	0.73	+0.3
1,608,553	-		PGA1_c15440	0.73	+0.5
1,608,553	-		PGA1_c15440	0.73	+2.0
1,608,553	-		PGA1_c15440	0.73	-1.4
1,608,553	-		PGA1_c15440	0.73	-0.5
1,608,588	-		PGA1_c15440	0.75	+1.1
1,608,588	-		PGA1_c15440	0.75	+2.6
1,608,609	-		PGA1_c15440	0.77	-0.6
1,608,634	+		PGA1_c15440	0.78	+0.6
1,608,642	-		PGA1_c15440	0.79	+1.1
1,608,772	+		PGA1_c15440	0.86	-0.9
1,608,772	+		PGA1_c15440	0.86	-2.0
1,608,780	-		PGA1_c15440	0.87	+0.1
1,608,785	-		PGA1_c15440	0.87	-0.2
1,608,785	-		PGA1_c15440	0.87	+0.1
1,608,791	+		PGA1_c15440	0.88	+0.1
1,608,797	+		PGA1_c15440	0.88	+0.2
1,608,799	-		PGA1_c15440	0.88	+0.0
1,608,876	-				+0.3
1,608,876	-				-0.2
1,608,876	-				-0.2
1,608,949	+				+0.1
1,608,951	+				-0.0
1,608,959	-				+0.1
1,609,003	+				+0.8
1,609,003	+				+0.8
1,609,003	-				+0.1
1,609,011	-				+0.6
1,609,051	+				+0.4
1,609,051	+				+0.9
1,609,051	+				+0.5
1,609,051	+				-0.4
1,609,051	+				+0.4
1,609,051	+				+0.9
1,609,051	+				-1.1
1,609,051	+				-1.2
1,609,051	+				-0.8
1,609,051	+				-0.1
1,609,058	-				+0.2
1,609,059	-				+0.6
1,609,059	-				-0.7
1,609,059	-				-1.3
1,609,059	-				-0.1
1,609,059	-				+1.1
1,609,059	-				+0.2
1,609,059	-				-1.8
1,609,059	-				+0.2
1,609,059	-				-0.7
1,609,059	-				-0.4
1,609,059	-				-0.1
1,609,059	-				-0.3
1,609,059	-				+0.9
1,609,059	-				+0.3
1,609,059	-				+1.4
1,609,059	-				-0.0
1,609,059	-				+0.2
1,609,059	-				-2.1
1,609,059	-				-0.3
1,609,059	-				+0.0
1,609,059	-				+1.1
1,609,059	-				-0.5
1,609,059	-				-0.1
1,609,137	+				+0.7
1,609,137	+				-0.5
1,609,137	+				+0.6
1,609,145	-				-0.4
1,609,145	-				+0.1
1,609,145	-				+1.2
1,609,377	-				+0.9
1,609,423	+				-0.1
1,609,428	+				+2.2
1,609,475	+		PGA1_c15460	0.11	+0.1
1,609,480	+		PGA1_c15460	0.12	+0.0
1,609,483	-		PGA1_c15460	0.12	+1.3
1,609,502	-		PGA1_c15460	0.14	-1.3
1,609,513	+		PGA1_c15460	0.16	+1.3
1,609,520	-		PGA1_c15460	0.17	-0.6
1,609,523	+		PGA1_c15460	0.17	+0.3
1,609,531	+		PGA1_c15460	0.18	+0.2
1,609,531	-		PGA1_c15460	0.18	+1.2
1,609,531	-		PGA1_c15460	0.18	+0.8
1,609,531	-		PGA1_c15460	0.18	-0.2
1,609,533	+		PGA1_c15460	0.18	+0.2
1,609,533	+		PGA1_c15460	0.18	+0.2
1,609,533	+		PGA1_c15460	0.18	+1.7
1,609,533	+		PGA1_c15460	0.18	+0.8
1,609,533	+		PGA1_c15460	0.18	+4.8
1,609,533	+		PGA1_c15460	0.18	+1.0
1,609,533	+		PGA1_c15460	0.18	-0.0
1,609,533	+		PGA1_c15460	0.18	+0.5
1,609,533	+		PGA1_c15460	0.18	+0.3
1,609,533	+		PGA1_c15460	0.18	+0.5
1,609,536	-		PGA1_c15460	0.18	+1.2
1,609,536	-		PGA1_c15460	0.18	+0.8
1,609,541	-		PGA1_c15460	0.19	+0.7
1,609,541	-		PGA1_c15460	0.19	+1.3
1,609,541	-		PGA1_c15460	0.19	+0.3
1,609,541	-		PGA1_c15460	0.19	+0.4
1,609,541	-		PGA1_c15460	0.19	+0.1
1,609,689	+		PGA1_c15460	0.36	-0.2
1,609,693	+		PGA1_c15460	0.37	+0.7
1,609,700	-		PGA1_c15460	0.38	-0.4
1,609,701	-		PGA1_c15460	0.38	+0.1
1,609,708	+		PGA1_c15460	0.39	-1.6
1,609,708	+		PGA1_c15460	0.39	+0.2
1,609,716	-		PGA1_c15460	0.40	+0.8
1,609,804	-		PGA1_c15460	0.50	+0.1
1,609,889	+		PGA1_c15460	0.60	-0.5
1,609,897	-		PGA1_c15460	0.61	-0.1