Experiment: Anaerobic growth in rich media with perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0266 and Dsui_0267 are separated by 438 nucleotides Dsui_0267 and Dsui_0268 are separated by 48 nucleotides
Dsui_0266: Dsui_0266 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 265,600 to 266,283
_0266
Dsui_0267: Dsui_0267 - multidrug resistance efflux pump, at 266,722 to 267,708
_0267
Dsui_0268: Dsui_0268 - ABC-type multidrug transport system, ATPase component, at 267,757 to 270,513
_0268
Position (kb) 266
267
268 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 265.756 kb on - strand, within Dsui_0266 at 265.882 kb on + strand, within Dsui_0266 at 265.896 kb on - strand, within Dsui_0266 at 265.933 kb on - strand, within Dsui_0266 at 265.942 kb on + strand, within Dsui_0266 at 265.986 kb on - strand, within Dsui_0266 at 266.015 kb on + strand, within Dsui_0266 at 266.015 kb on - strand, within Dsui_0266 at 266.023 kb on - strand, within Dsui_0266 at 266.048 kb on + strand, within Dsui_0266 at 266.081 kb on - strand, within Dsui_0266 at 266.132 kb on - strand, within Dsui_0266 at 266.135 kb on + strand at 266.138 kb on - strand, within Dsui_0266 at 266.224 kb on - strand at 266.287 kb on + strand at 266.297 kb on - strand at 266.328 kb on + strand at 266.328 kb on + strand at 266.336 kb on - strand at 266.361 kb on - strand at 266.362 kb on + strand at 266.660 kb on + strand at 266.665 kb on + strand at 266.724 kb on + strand at 266.724 kb on + strand at 266.951 kb on + strand, within Dsui_0267 at 267.149 kb on + strand, within Dsui_0267 at 267.202 kb on + strand, within Dsui_0267 at 267.210 kb on - strand at 267.249 kb on + strand, within Dsui_0267 at 267.249 kb on + strand, within Dsui_0267 at 267.257 kb on - strand, within Dsui_0267 at 267.264 kb on - strand, within Dsui_0267 at 267.367 kb on + strand, within Dsui_0267 at 267.434 kb on + strand, within Dsui_0267 at 267.707 kb on + strand at 267.823 kb on - strand at 267.918 kb on - strand at 267.947 kb on - strand at 267.973 kb on + strand at 268.035 kb on - strand, within Dsui_0268 at 268.047 kb on + strand, within Dsui_0268 at 268.055 kb on - strand at 268.115 kb on - strand at 268.231 kb on + strand, within Dsui_0268 at 268.353 kb on - strand at 268.478 kb on + strand, within Dsui_0268 at 268.599 kb on - strand, within Dsui_0268
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor remove 265,756 - Dsui_0266 0.23 +0.2 265,882 + Dsui_0266 0.41 -2.0 265,896 - Dsui_0266 0.43 +0.3 265,933 - Dsui_0266 0.49 -0.2 265,942 + Dsui_0266 0.50 -0.4 265,986 - Dsui_0266 0.56 -0.2 266,015 + Dsui_0266 0.61 -0.5 266,015 - Dsui_0266 0.61 -0.6 266,023 - Dsui_0266 0.62 -0.3 266,048 + Dsui_0266 0.65 -0.5 266,081 - Dsui_0266 0.70 -0.2 266,132 - Dsui_0266 0.78 -0.3 266,135 + +1.0 266,138 - Dsui_0266 0.79 -0.3 266,224 - +0.0 266,287 + -0.3 266,297 - -0.5 266,328 + -1.1 266,328 + +0.2 266,336 - +1.0 266,361 - -0.4 266,362 + -0.2 266,660 + -0.2 266,665 + -0.7 266,724 + +0.9 266,724 + -2.4 266,951 + Dsui_0267 0.23 +1.9 267,149 + Dsui_0267 0.43 -1.6 267,202 + Dsui_0267 0.49 -0.7 267,210 - +1.9 267,249 + Dsui_0267 0.53 +1.9 267,249 + Dsui_0267 0.53 -0.9 267,257 - Dsui_0267 0.54 +0.3 267,264 - Dsui_0267 0.55 -0.1 267,367 + Dsui_0267 0.65 +0.9 267,434 + Dsui_0267 0.72 -0.4 267,707 + -0.1 267,823 - +1.9 267,918 - +1.9 267,947 - -0.7 267,973 + +0.3 268,035 - Dsui_0268 0.10 +0.9 268,047 + Dsui_0268 0.11 -0.1 268,055 - +1.9 268,115 - +1.9 268,231 + Dsui_0268 0.17 +1.9 268,353 - +3.5 268,478 + Dsui_0268 0.26 +0.3 268,599 - Dsui_0268 0.31 +1.9
Or see this region's nucleotide sequence