Strain Fitness in Shewanella amazonensis SB2B around Sama_3585

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
4,217,662	+				-0.4
4,217,662	+				+2.0
4,217,719	+				-0.6
4,217,719	+				-0.6
4,217,719	+				+0.1
4,217,719	+				+0.5
4,217,719	+				+4.7
4,217,719	+				+3.2
4,217,720	-				+0.1
4,217,720	-				-0.7
4,217,720	-				-0.8
4,217,720	-				-0.5
4,217,720	-				+1.8
4,217,720	-				+2.4
4,217,720	-				-0.3
4,217,720	-				-1.2
4,217,720	-				-2.9
4,217,775	+		Sama_3583	0.18	-0.7
4,217,775	+		Sama_3583	0.18	+2.0
4,217,775	+		Sama_3583	0.18	-1.5
4,217,775	+		Sama_3583	0.18	-0.4
4,217,775	+		Sama_3583	0.18	-0.7
4,217,775	+		Sama_3583	0.18	-1.4
4,217,775	+		Sama_3583	0.18	-0.2
4,217,776	-		Sama_3583	0.19	-3.1
4,217,776	-		Sama_3583	0.19	+2.6
4,217,776	-		Sama_3583	0.19	+1.9
4,217,776	-		Sama_3583	0.19	-2.1
4,217,776	-		Sama_3583	0.19	+1.8
4,217,776	-		Sama_3583	0.19	-0.2
4,217,805	+		Sama_3583	0.27	-0.7
4,217,805	+		Sama_3583	0.27	+3.6
4,217,805	+		Sama_3583	0.27	+2.0
4,217,806	-		Sama_3583	0.28	-1.5
4,217,806	-		Sama_3583	0.28	+0.3
4,217,806	-		Sama_3583	0.28	+6.0
4,217,806	-		Sama_3583	0.28	+4.0
4,217,806	-		Sama_3583	0.28	-0.0
4,217,806	-		Sama_3583	0.28	-0.8
4,217,806	-		Sama_3583	0.28	+0.7
4,217,844	+		Sama_3583	0.39	+0.1
4,217,845	-		Sama_3583	0.39	-2.9
4,217,873	+		Sama_3583	0.48	-0.4
4,217,873	+		Sama_3583	0.48	+0.8
4,217,873	+		Sama_3583	0.48	+0.7
4,217,874	-		Sama_3583	0.48	-0.5
4,217,874	-		Sama_3583	0.48	-2.1
4,217,902	-		Sama_3583	0.56	+1.7
4,217,992	+		Sama_3583	0.83	+0.5
4,217,993	-		Sama_3583	0.84	+1.6
4,218,041	-				-2.5
4,218,098	+				+3.3
4,218,099	-				-0.1
4,218,111	+				-2.1
4,218,119	-				-0.0
4,218,119	-				-0.3
4,218,209	+		Sama_3584	0.28	+3.4
4,218,213	+		Sama_3584	0.29	+1.4
4,218,213	+		Sama_3584	0.29	-1.2
4,218,213	+		Sama_3584	0.29	-1.5
4,218,213	+		Sama_3584	0.29	-0.7
4,218,213	+		Sama_3584	0.29	+0.4
4,218,213	+		Sama_3584	0.29	+0.9
4,218,213	+		Sama_3584	0.29	-0.5
4,218,213	+		Sama_3584	0.29	+2.0
4,218,213	+		Sama_3584	0.29	-2.1
4,218,214	-		Sama_3584	0.30	-0.7
4,218,214	-		Sama_3584	0.30	+0.2
4,218,214	-		Sama_3584	0.30	-0.8
4,218,214	-		Sama_3584	0.30	-1.6
4,218,271	-		Sama_3584	0.47	-1.7
4,218,411	+				+0.4
4,218,411	+				+0.2
4,218,411	+				+0.5
4,218,412	-				-2.4
4,218,426	+				-3.1
4,218,427	-				+1.7
4,218,427	-				-0.6
4,218,446	+				-0.9
4,218,447	-				-1.9
4,218,447	-				-1.2
4,218,447	-				+0.7
4,218,461	+				+0.6
4,218,461	+				-1.9
4,218,462	-				-0.0
4,218,492	-				-3.3
4,218,492	-				-1.3
4,218,492	-				+2.7
4,218,492	-				-1.1
4,218,492	-				+1.6
4,218,515	+				+1.1
4,218,515	+				+0.5
4,218,550	-				-2.0
4,218,649	+				-0.9
4,218,649	+				-1.4
4,218,649	+				-0.4
4,218,649	+				+3.0
4,218,649	+				-0.9
4,218,649	+				-3.1
4,218,649	+				+4.0
4,218,649	+				-1.7
4,218,649	+				-2.3
4,218,649	+				-0.9
4,218,649	+				-2.4
4,218,650	-				-2.1
4,218,650	-				+0.8
4,218,650	-				-2.2
4,218,650	-				-0.5
4,218,650	-				-0.6
4,218,650	-				+0.1
4,218,650	-				-1.6
4,218,650	-				+0.7
4,218,650	-				+0.3
4,218,650	-				-1.5
4,218,650	-				-0.6
4,218,658	+				-1.1
4,218,658	+				+0.7
4,218,658	+				-1.1
4,218,658	+				-0.8
4,218,658	+				-1.7
4,218,658	+				+0.7
4,218,658	+				-1.3
4,218,659	-				+1.4
4,218,659	-				+1.5
4,218,659	-				+0.9
4,218,659	-				-1.4
4,218,659	-				+2.2
4,218,659	-				-0.6
4,218,673	+				+0.8
4,218,674	-				+0.0
4,218,674	-				+0.8
4,218,678	+				-0.2
4,218,678	+				+1.7
4,218,678	+				+2.3
4,218,678	+				+0.1
4,218,679	-				-1.2
4,218,689	+		Sama_3585	0.11	-0.5
4,218,689	+		Sama_3585	0.11	+0.2
4,218,689	+		Sama_3585	0.11	-1.6
4,218,690	-		Sama_3585	0.12	+2.6
4,218,690	-		Sama_3585	0.12	-1.6
4,218,690	-		Sama_3585	0.12	-1.6
4,218,690	-		Sama_3585	0.12	-0.6
4,218,690	-		Sama_3585	0.12	+0.9
4,218,697	+		Sama_3585	0.14	-0.5
4,218,697	+		Sama_3585	0.14	-1.7
4,218,697	+		Sama_3585	0.14	-0.2
4,218,697	+		Sama_3585	0.14	+0.1
4,218,697	+		Sama_3585	0.14	+6.3
4,218,697	+		Sama_3585	0.14	-0.4
4,218,698	-		Sama_3585	0.14	-1.1
4,218,698	-		Sama_3585	0.14	-1.1
4,218,698	-		Sama_3585	0.14	-1.1
4,218,698	-		Sama_3585	0.14	-0.5
4,218,698	-		Sama_3585	0.14	-0.6
4,218,698	-		Sama_3585	0.14	+1.3
4,218,698	-		Sama_3585	0.14	-1.4
4,218,698	-		Sama_3585	0.14	-0.3
4,218,698	-		Sama_3585	0.14	+1.5
4,218,698	-		Sama_3585	0.14	-1.6
4,218,757	+		Sama_3585	0.33	+2.8
4,218,757	+		Sama_3585	0.33	-2.0
4,218,758	-		Sama_3585	0.33	-1.7
4,218,758	-		Sama_3585	0.33	-1.1
4,218,758	-		Sama_3585	0.33	+1.3
4,218,772	+		Sama_3585	0.38	-0.3
4,218,772	+		Sama_3585	0.38	-1.3
4,218,798	+		Sama_3585	0.46	-0.4
4,218,831	+		Sama_3585	0.57	-2.6
4,218,831	+		Sama_3585	0.57	+0.2
4,218,832	-		Sama_3585	0.57	+0.0
4,218,832	-		Sama_3585	0.57	+4.5
4,218,832	-		Sama_3585	0.57	-0.9
4,218,859	+		Sama_3585	0.66	-1.1
4,218,859	+		Sama_3585	0.66	+0.2
4,218,859	+		Sama_3585	0.66	+3.7
4,218,970	+				-1.9
4,218,970	+				-2.3
4,218,971	-				-1.3
4,218,971	-				-1.0
4,218,999	+				+0.8
4,218,999	+				-2.1
4,218,999	+				-0.0
4,218,999	+				-0.3
4,218,999	+				+0.2
4,218,999	+				-3.9
4,218,999	+				-0.1
4,218,999	+				-1.3
4,218,999	+				+1.0
4,218,999	+				-1.7
4,218,999	+				-1.3
4,219,000	-				+2.5
4,219,000	-				-2.0
4,219,000	-				+1.5
4,219,000	-				-1.7
4,219,000	-				+0.4
4,219,003	+				+1.6
4,219,003	+				-2.3
4,219,003	+				+1.0
4,219,004	-				+1.1
4,219,004	-				+1.9
4,219,004	-				+3.9
4,219,013	+				-1.5
4,219,013	+				-0.7
4,219,014	-				+3.8
4,219,082	-		Sama_3586	0.11	+1.5
4,219,131	-		Sama_3586	0.19	+1.7
4,219,131	-		Sama_3586	0.19	+0.8
4,219,131	-		Sama_3586	0.19	+1.0
4,219,203	-		Sama_3586	0.31	+1.5
4,219,312	-		Sama_3586	0.49	+0.2
4,219,343	+		Sama_3586	0.54	-0.7
4,219,343	+		Sama_3586	0.54	-1.7
4,219,343	+		Sama_3586	0.54	-0.6
4,219,344	-		Sama_3586	0.54	+0.2
4,219,344	-		Sama_3586	0.54	-1.4
4,219,344	-		Sama_3586	0.54	-2.3
4,219,344	-		Sama_3586	0.54	+0.3
4,219,403	+		Sama_3586	0.64	-0.8
4,219,403	+		Sama_3586	0.64	-1.8
4,219,403	+		Sama_3586	0.64	+0.5
4,219,403	+		Sama_3586	0.64	-2.3
4,219,403	+		Sama_3586	0.64	-0.6
4,219,403	+		Sama_3586	0.64	+0.4
4,219,403	+		Sama_3586	0.64	+4.0
4,219,403	+		Sama_3586	0.64	+0.2
4,219,403	+		Sama_3586	0.64	-1.9
4,219,403	+		Sama_3586	0.64	-2.1
4,219,403	+		Sama_3586	0.64	+0.5
4,219,403	+		Sama_3586	0.64	+6.1
4,219,404	-		Sama_3586	0.64	-0.4
4,219,404	-		Sama_3586	0.64	-0.0
4,219,404	-		Sama_3586	0.64	+0.7
4,219,404	-		Sama_3586	0.64	-1.1
4,219,404	-		Sama_3586	0.64	-0.7
4,219,404	-		Sama_3586	0.64	-2.1
4,219,404	-		Sama_3586	0.64	-0.7
4,219,404	-		Sama_3586	0.64	-0.8
4,219,404	-		Sama_3586	0.64	-1.8
4,219,404	-		Sama_3586	0.64	-1.5
4,219,404	-		Sama_3586	0.64	+0.6
4,219,409	+		Sama_3586	0.65	-0.5
4,219,409	+		Sama_3586	0.65	-1.2
4,219,409	+		Sama_3586	0.65	-0.1
4,219,409	+		Sama_3586	0.65	+1.6
4,219,409	+		Sama_3586	0.65	-0.5
4,219,409	+		Sama_3586	0.65	-2.5
4,219,409	+		Sama_3586	0.65	-1.9
4,219,409	+		Sama_3586	0.65	-1.9
4,219,409	+		Sama_3586	0.65	-1.4
4,219,409	+		Sama_3586	0.65	+1.2
4,219,409	+		Sama_3586	0.65	+0.7
4,219,410	-		Sama_3586	0.65	+0.4
4,219,410	-		Sama_3586	0.65	+3.6
4,219,410	-		Sama_3586	0.65	+0.3
4,219,410	-		Sama_3586	0.65	+0.4
4,219,410	-		Sama_3586	0.65	+0.3
4,219,410	-		Sama_3586	0.65	-0.8
4,219,449	+		Sama_3586	0.72	-1.9
4,219,449	+		Sama_3586	0.72	-2.1
4,219,449	+		Sama_3586	0.72	+0.5
4,219,449	+		Sama_3586	0.72	-1.5
4,219,449	+		Sama_3586	0.72	-2.1
4,219,450	-		Sama_3586	0.72	-2.0
4,219,450	-		Sama_3586	0.72	-1.8
4,219,450	-		Sama_3586	0.72	+1.6
4,219,450	-		Sama_3586	0.72	-0.2
4,219,450	-		Sama_3586	0.72	+0.1
4,219,450	-		Sama_3586	0.72	+1.7
4,219,450	-		Sama_3586	0.72	-1.5
4,219,450	-		Sama_3586	0.72	+1.0
4,219,457	+		Sama_3586	0.73	-0.4
4,219,458	-		Sama_3586	0.73	+4.7
4,219,458	-		Sama_3586	0.73	-0.0
4,219,458	-		Sama_3586	0.73	-0.6
4,219,503	+		Sama_3586	0.81	+1.7
4,219,525	+		Sama_3586	0.84	+1.2
4,219,545	+		Sama_3586	0.87	-1.4
4,219,545	+		Sama_3586	0.87	-0.8
4,219,545	+		Sama_3586	0.87	-0.5
4,219,546	-		Sama_3586	0.88	-0.2
4,219,546	-		Sama_3586	0.88	-2.4
4,219,658	+				+0.4
4,219,659	-				+3.4
4,219,716	+				+4.0
4,219,792	+				-0.4
4,219,793	-				-1.3
4,219,793	-				-0.3
4,219,793	-				-0.3
4,219,812	+		Sama_3587	0.10	-1.1
4,219,812	+		Sama_3587	0.10	+0.5
4,219,812	+		Sama_3587	0.10	-1.0
4,219,813	-		Sama_3587	0.10	-0.6
4,219,833	+		Sama_3587	0.12	-1.2
4,219,834	-		Sama_3587	0.12	-0.1
4,219,902	+		Sama_3587	0.18	-1.8
4,219,902	+		Sama_3587	0.18	+0.8
4,219,902	+		Sama_3587	0.18	-1.2
4,219,903	-		Sama_3587	0.18	-0.4
4,219,903	-		Sama_3587	0.18	-0.9
4,219,903	-		Sama_3587	0.18	-0.0
4,219,903	-		Sama_3587	0.18	-0.6
4,219,903	-		Sama_3587	0.18	+0.4
4,219,918	+		Sama_3587	0.19	-1.6
4,219,918	+		Sama_3587	0.19	-0.5
4,219,919	-		Sama_3587	0.20	+1.8
4,219,919	-		Sama_3587	0.20	-0.2
4,219,919	-		Sama_3587	0.20	-1.2
4,219,935	+		Sama_3587	0.21	-0.5