Strain Fitness in Shewanella amazonensis SB2B around Sama_3577

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
4,212,351	+		Sama_3575	0.88	+6.2
4,212,352	-		Sama_3575	0.88	-3.1
4,212,474	+				-1.9
4,212,475	-				+1.9
4,212,475	-				-0.7
4,212,511	+				+2.8
4,212,534	+				+0.2
4,212,535	-				-2.3
4,212,546	-				+0.4
4,212,707	+		Sama_3576	0.23	-0.7
4,212,707	+		Sama_3576	0.23	+0.4
4,212,708	-		Sama_3576	0.23	-1.7
4,212,796	-		Sama_3576	0.35	-1.1
4,212,796	-		Sama_3576	0.35	-0.0
4,212,805	+		Sama_3576	0.36	+1.0
4,212,805	+		Sama_3576	0.36	+0.8
4,212,806	-		Sama_3576	0.36	+0.6
4,212,806	-		Sama_3576	0.36	+0.9
4,212,806	-		Sama_3576	0.36	+0.1
4,212,819	+		Sama_3576	0.38	-0.9
4,212,819	+		Sama_3576	0.38	+0.3
4,212,819	+		Sama_3576	0.38	+1.1
4,212,819	+		Sama_3576	0.38	+1.3
4,212,819	+		Sama_3576	0.38	-0.6
4,212,820	-		Sama_3576	0.38	+2.7
4,212,820	-		Sama_3576	0.38	+0.9
4,212,820	-		Sama_3576	0.38	-0.5
4,212,820	-		Sama_3576	0.38	+1.1
4,212,820	-		Sama_3576	0.38	+0.9
4,212,820	-		Sama_3576	0.38	+1.4
4,212,823	+		Sama_3576	0.39	-0.4
4,212,823	+		Sama_3576	0.39	-1.1
4,212,823	+		Sama_3576	0.39	-1.5
4,212,823	+		Sama_3576	0.39	-2.4
4,212,823	+		Sama_3576	0.39	-0.0
4,212,823	+		Sama_3576	0.39	-1.9
4,212,824	-		Sama_3576	0.39	+0.0
4,212,824	-		Sama_3576	0.39	+0.4
4,212,824	-		Sama_3576	0.39	-1.3
4,212,824	-		Sama_3576	0.39	-1.2
4,212,824	-		Sama_3576	0.39	-0.2
4,212,876	-		Sama_3576	0.46	+0.7
4,212,876	-		Sama_3576	0.46	-1.9
4,212,902	+		Sama_3576	0.49	-1.9
4,212,902	+		Sama_3576	0.49	-0.4
4,212,903	-		Sama_3576	0.49	-2.3
4,212,903	-		Sama_3576	0.49	-1.4
4,212,903	-		Sama_3576	0.49	-2.2
4,212,979	+		Sama_3576	0.60	+0.9
4,212,979	+		Sama_3576	0.60	-2.1
4,213,111	+		Sama_3576	0.78	-2.2
4,213,111	+		Sama_3576	0.78	-2.2
4,213,111	+		Sama_3576	0.78	-2.2
4,213,111	+		Sama_3576	0.78	-0.8
4,213,111	+		Sama_3576	0.78	-1.0
4,213,111	+		Sama_3576	0.78	+0.6
4,213,111	+		Sama_3576	0.78	+2.5
4,213,111	+		Sama_3576	0.78	+3.6
4,213,111	+		Sama_3576	0.78	+0.9
4,213,111	+		Sama_3576	0.78	-0.2
4,213,112	-		Sama_3576	0.78	-2.7
4,213,112	-		Sama_3576	0.78	+4.6
4,213,112	-		Sama_3576	0.78	+0.9
4,213,112	-		Sama_3576	0.78	-1.6
4,213,112	-		Sama_3576	0.78	-0.4
4,213,112	-		Sama_3576	0.78	+0.3
4,213,112	-		Sama_3576	0.78	+2.1
4,213,112	-		Sama_3576	0.78	+1.0
4,213,112	-		Sama_3576	0.78	-1.7
4,213,112	-		Sama_3576	0.78	+2.3
4,213,112	-		Sama_3576	0.78	-0.3
4,213,112	-		Sama_3576	0.78	-1.0
4,213,112	-		Sama_3576	0.78	-1.4
4,213,112	-		Sama_3576	0.78	-1.4
4,213,112	-		Sama_3576	0.78	+2.3
4,213,112	-		Sama_3576	0.78	+1.9
4,213,112	-		Sama_3576	0.78	-1.7
4,213,148	-		Sama_3576	0.83	+5.1
4,213,148	-		Sama_3576	0.83	-1.6
4,213,235	+				+0.4
4,213,236	-				+0.4
4,213,265	-				-1.1
4,213,265	-				-1.2
4,213,349	+				-0.8
4,213,349	+				-0.1
4,213,349	+				-0.5
4,213,349	+				-0.5
4,213,349	+				-0.6
4,213,350	-				-1.4
4,213,350	-				+1.8
4,213,350	-				+1.1
4,213,352	+				+2.0
4,213,352	+				+0.4
4,213,352	+				-1.0
4,213,352	+				+0.2
4,213,352	+				+2.1
4,213,353	-				-2.4
4,213,353	-				-0.6
4,213,353	-				+1.8
4,213,353	-				-1.2
4,213,353	-				-0.5
4,213,353	-				-3.0
4,213,353	-				-1.6
4,213,353	-				-1.1
4,213,359	+				+0.2
4,213,360	-				-1.8
4,213,360	-				+1.3
4,213,372	+				-1.8
4,213,372	+				-0.5
4,213,372	+				-0.8
4,213,372	+				-1.3
4,213,372	+				+2.3
4,213,372	+				-1.9
4,213,372	+				-0.0
4,213,372	+				-1.7
4,213,372	+				+1.6
4,213,372	+				+0.2
4,213,372	+				-1.6
4,213,372	+				+0.4
4,213,372	+				-0.8
4,213,372	+				-0.5
4,213,372	+				-2.2
4,213,373	-				+3.4
4,213,373	-				-1.0
4,213,373	-				+3.3
4,213,373	-				-1.1
4,213,373	-				-0.4
4,213,373	-				-1.0
4,213,373	-				-1.0
4,213,373	-				-1.6
4,213,373	-				+0.0
4,213,373	-				-1.8
4,213,373	-				+1.3
4,213,373	-				+1.2
4,213,373	-				+2.0
4,213,373	-				+0.9
4,213,373	-				-1.5
4,213,390	+		Sama_3577	0.10	+2.1
4,213,403	-		Sama_3577	0.12	-0.3
4,213,475	+		Sama_3577	0.18	-0.7
4,213,475	+		Sama_3577	0.18	+0.1
4,213,475	+		Sama_3577	0.18	-1.0
4,213,475	+		Sama_3577	0.18	+0.7
4,213,475	+		Sama_3577	0.18	-0.3
4,213,475	+		Sama_3577	0.18	+1.1
4,213,475	+		Sama_3577	0.18	-2.8
4,213,475	+		Sama_3577	0.18	+1.1
4,213,476	-		Sama_3577	0.18	-0.1
4,213,476	-		Sama_3577	0.18	-2.0
4,213,476	-		Sama_3577	0.18	-0.3
4,213,476	-		Sama_3577	0.18	+0.7
4,213,476	-		Sama_3577	0.18	+0.3
4,213,476	-		Sama_3577	0.18	+0.7
4,213,530	+		Sama_3577	0.23	+0.2
4,213,530	+		Sama_3577	0.23	-0.2
4,213,531	-		Sama_3577	0.23	+0.9
4,213,531	-		Sama_3577	0.23	-1.7
4,213,531	-		Sama_3577	0.23	+3.2
4,213,633	+		Sama_3577	0.32	+2.6
4,213,633	+		Sama_3577	0.32	-1.7
4,213,664	+		Sama_3577	0.35	+0.2
4,213,664	+		Sama_3577	0.35	-2.0
4,213,664	+		Sama_3577	0.35	-0.0
4,213,664	+		Sama_3577	0.35	+1.0
4,213,665	-		Sama_3577	0.35	-1.3
4,213,665	-		Sama_3577	0.35	-0.8
4,213,665	-		Sama_3577	0.35	-1.2
4,213,719	+		Sama_3577	0.39	+0.3
4,213,737	+		Sama_3577	0.41	-0.6
4,213,737	+		Sama_3577	0.41	-1.1
4,213,737	+		Sama_3577	0.41	-2.4
4,213,737	+		Sama_3577	0.41	+1.3
4,213,738	-		Sama_3577	0.41	-1.0
4,213,738	-		Sama_3577	0.41	-0.0
4,213,738	-		Sama_3577	0.41	-0.9
4,213,738	-		Sama_3577	0.41	+0.3
4,213,738	-		Sama_3577	0.41	-1.7
4,213,777	+		Sama_3577	0.45	-1.7
4,213,777	+		Sama_3577	0.45	+1.7
4,213,778	-		Sama_3577	0.45	+2.5
4,213,778	-		Sama_3577	0.45	-0.5
4,213,778	-		Sama_3577	0.45	-0.3
4,213,811	+		Sama_3577	0.47	-2.3
4,213,812	-		Sama_3577	0.48	+1.2
4,213,812	-		Sama_3577	0.48	-0.9
4,213,822	+		Sama_3577	0.48	-2.0
4,213,823	-		Sama_3577	0.49	-0.2
4,213,823	-		Sama_3577	0.49	+1.5
4,213,977	+		Sama_3577	0.62	+2.4
4,213,977	+		Sama_3577	0.62	+4.0
4,213,978	-		Sama_3577	0.62	+1.3
4,214,000	+		Sama_3577	0.64	+2.6
4,214,000	+		Sama_3577	0.64	+1.3
4,214,056	+		Sama_3577	0.69	-2.4
4,214,057	-		Sama_3577	0.69	-1.9
4,214,057	-		Sama_3577	0.69	+0.5
4,214,159	+		Sama_3577	0.78	-0.2
4,214,159	+		Sama_3577	0.78	+0.2
4,214,159	+		Sama_3577	0.78	+3.7
4,214,159	+		Sama_3577	0.78	-0.4
4,214,159	+		Sama_3577	0.78	-1.3
4,214,160	-		Sama_3577	0.78	+0.7
4,214,160	-		Sama_3577	0.78	+0.9
4,214,160	-		Sama_3577	0.78	+0.3
4,214,160	-		Sama_3577	0.78	-0.5
4,214,229	+		Sama_3577	0.84	-1.7
4,214,229	+		Sama_3577	0.84	-0.3
4,214,229	+		Sama_3577	0.84	-1.5
4,214,229	+		Sama_3577	0.84	-2.6
4,214,229	+		Sama_3577	0.84	+1.6
4,214,229	+		Sama_3577	0.84	+1.7
4,214,230	-		Sama_3577	0.84	+0.4
4,214,230	-		Sama_3577	0.84	-0.0
4,214,230	-		Sama_3577	0.84	+4.2
4,214,230	-		Sama_3577	0.84	+0.2
4,214,230	-		Sama_3577	0.84	-1.5
4,214,230	-		Sama_3577	0.84	-1.7
4,214,230	-		Sama_3577	0.84	-1.0
4,214,230	-		Sama_3577	0.84	-0.0
4,214,246	-		Sama_3577	0.86	-0.3
4,214,280	+		Sama_3577	0.89	-0.2
4,214,310	+				+1.2
4,214,310	+				+1.0
4,214,311	-				+0.3
4,214,311	-				-0.9
4,214,350	-				-1.9
4,214,405	+				-0.1
4,214,406	-				+2.3
4,214,448	-				+0.7
4,214,448	-				-0.0
4,214,457	+				-0.0
4,214,465	+				-0.0
4,214,465	+				+0.4
4,214,466	-				+0.6
4,214,466	-				-0.7
4,214,466	-				-0.8
4,214,469	+				-0.3
4,214,469	+				-0.1
4,214,469	+				+0.9
4,214,470	-				-2.3
4,214,470	-				-0.2
4,214,470	-				-2.1
4,214,485	+				-0.2
4,214,485	+				-0.2
4,214,485	+				+0.1
4,214,486	-				+0.9
4,214,486	-				-0.7
4,214,491	+				-2.2
4,214,492	-				-1.1
4,214,492	-				-2.4
4,214,496	+				+0.7
4,214,552	+		Sama_3578	0.31	+0.1
4,214,552	+		Sama_3578	0.31	+5.3
4,214,553	-		Sama_3578	0.31	+0.4
4,214,612	-		Sama_3578	0.59	-0.9
4,214,619	+		Sama_3578	0.62	-1.1
4,214,619	+		Sama_3578	0.62	+1.8
4,214,619	+		Sama_3578	0.62	+1.6
4,214,620	-		Sama_3578	0.63	+2.2
4,214,620	-		Sama_3578	0.63	+2.6
4,214,620	-		Sama_3578	0.63	-1.3
4,214,649	+		Sama_3578	0.77	-1.1
4,214,650	-		Sama_3578	0.77	-0.5
4,214,666	+		Sama_3578	0.85	-1.4
4,214,697	-				-0.0
4,214,715	+				+2.2
4,214,715	+				+0.1
4,214,715	+				-1.8
4,214,716	-				-1.5
4,214,730	-				+3.6
4,214,730	-				-0.0
4,214,982	-		Sama_3579	0.72	-0.2
4,215,022	+		Sama_3579	0.85	-0.6
4,215,023	-		Sama_3579	0.86	-1.8
4,215,023	-		Sama_3579	0.86	-0.7
4,215,086	+				-0.4
4,215,086	+				+3.2
4,215,109	+				+3.0
4,215,109	+				+0.5
4,215,109	+				+3.5
4,215,109	+				-0.0
4,215,109	+				-2.0
4,215,109	+				+2.0
4,215,110	-				+0.4
4,215,110	-				+0.8
4,215,110	-				+0.7
4,215,110	-				+0.5
4,215,169	+				+0.4
4,215,170	-				-2.0
4,215,170	-				-0.0
4,215,171	+				+3.2
4,215,171	+				+0.4
4,215,171	+				+1.3
4,215,171	+				-0.7
4,215,171	+				-2.4
4,215,171	+				+2.2
4,215,171	+				+0.1
4,215,172	-				-2.4
4,215,172	-				-2.0
4,215,172	-				-0.9
4,215,172	-				+0.3
4,215,172	-				+0.6
4,215,172	-				-0.1
4,215,212	+				-0.5
4,215,213	-				-0.4
4,215,213	-				+5.3
4,215,213	-				-0.9
4,215,313	+		Sama_3580	0.21	+0.7
4,215,313	+		Sama_3580	0.21	-2.2
4,215,313	+		Sama_3580	0.21	-0.6
4,215,314	-		Sama_3580	0.21	-1.0
4,215,314	-		Sama_3580	0.21	-1.6
4,215,314	-		Sama_3580	0.21	-0.0
4,215,314	-		Sama_3580	0.21	+1.6
4,215,314	-		Sama_3580	0.21	-1.0
4,215,314	-		Sama_3580	0.21	+1.7
4,215,314	-		Sama_3580	0.21	+0.3
4,215,314	-		Sama_3580	0.21	+0.8
4,215,326	+		Sama_3580	0.24	-0.2
4,215,326	+		Sama_3580	0.24	-1.6
4,215,326	+		Sama_3580	0.24	-0.6
4,215,326	+		Sama_3580	0.24	-2.5
4,215,327	-		Sama_3580	0.24	-0.4
4,215,327	-		Sama_3580	0.24	-2.6
4,215,334	+		Sama_3580	0.26	+0.9
4,215,334	+		Sama_3580	0.26	+0.2
4,215,334	+		Sama_3580	0.26	+0.5
4,215,334	+		Sama_3580	0.26	-0.3
4,215,335	-		Sama_3580	0.26	+3.0
4,215,369	+		Sama_3580	0.34	+1.9
4,215,369	+		Sama_3580	0.34	-1.1
4,215,369	+		Sama_3580	0.34	-2.1
4,215,370	-		Sama_3580	0.34	-0.3