Strain Fitness in Shewanella amazonensis SB2B around Sama_3262

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,869,991	+		Sama_3261	0.32	-0.9
3,869,992	-		Sama_3261	0.32	+1.5
3,869,992	-		Sama_3261	0.32	-0.1
3,870,000	+		Sama_3261	0.33	-1.1
3,870,000	+		Sama_3261	0.33	-0.2
3,870,000	+		Sama_3261	0.33	-0.4
3,870,000	+		Sama_3261	0.33	+0.7
3,870,000	+		Sama_3261	0.33	+0.2
3,870,000	+		Sama_3261	0.33	-0.4
3,870,001	-		Sama_3261	0.33	-2.0
3,870,001	-		Sama_3261	0.33	+3.4
3,870,001	-		Sama_3261	0.33	+0.3
3,870,001	-		Sama_3261	0.33	-1.0
3,870,001	-		Sama_3261	0.33	-0.4
3,870,063	+		Sama_3261	0.37	-0.5
3,870,064	-		Sama_3261	0.37	+0.6
3,870,064	-		Sama_3261	0.37	+2.7
3,870,084	-		Sama_3261	0.39	-1.6
3,870,104	+		Sama_3261	0.40	-1.0
3,870,104	+		Sama_3261	0.40	+0.7
3,870,104	-		Sama_3261	0.40	-0.8
3,870,104	+		Sama_3261	0.40	-0.4
3,870,104	+		Sama_3261	0.40	-1.4
3,870,104	+		Sama_3261	0.40	+0.1
3,870,105	-		Sama_3261	0.40	-0.1
3,870,105	-		Sama_3261	0.40	+0.2
3,870,105	-		Sama_3261	0.40	+0.0
3,870,173	+		Sama_3261	0.45	-0.2
3,870,211	+		Sama_3261	0.48	-0.6
3,870,211	+		Sama_3261	0.48	-0.7
3,870,212	-		Sama_3261	0.48	+0.7
3,870,215	+		Sama_3261	0.48	-0.8
3,870,215	+		Sama_3261	0.48	+1.2
3,870,215	+		Sama_3261	0.48	+1.0
3,870,215	+		Sama_3261	0.48	-1.2
3,870,215	+		Sama_3261	0.48	-1.1
3,870,215	+		Sama_3261	0.48	-1.1
3,870,215	+		Sama_3261	0.48	+1.3
3,870,215	+		Sama_3261	0.48	+1.9
3,870,216	-		Sama_3261	0.48	-1.8
3,870,216	-		Sama_3261	0.48	-2.0
3,870,238	+		Sama_3261	0.50	-0.8
3,870,238	+		Sama_3261	0.50	+0.2
3,870,238	+		Sama_3261	0.50	+1.4
3,870,238	+		Sama_3261	0.50	-0.8
3,870,238	+		Sama_3261	0.50	+1.2
3,870,238	+		Sama_3261	0.50	+0.4
3,870,238	+		Sama_3261	0.50	-1.7
3,870,238	+		Sama_3261	0.50	+1.0
3,870,239	-		Sama_3261	0.50	+0.0
3,870,239	-		Sama_3261	0.50	-1.3
3,870,239	-		Sama_3261	0.50	-0.3
3,870,239	-		Sama_3261	0.50	+0.5
3,870,257	+		Sama_3261	0.51	-2.2
3,870,258	-		Sama_3261	0.51	-1.6
3,870,258	-		Sama_3261	0.51	-0.4
3,870,286	+		Sama_3261	0.53	-0.9
3,870,286	+		Sama_3261	0.53	-2.2
3,870,286	+		Sama_3261	0.53	+1.4
3,870,287	-		Sama_3261	0.53	+0.2
3,870,287	-		Sama_3261	0.53	-1.0
3,870,287	-		Sama_3261	0.53	+1.0
3,870,287	-		Sama_3261	0.53	-0.6
3,870,287	-		Sama_3261	0.53	-2.1
3,870,287	-		Sama_3261	0.53	+1.9
3,870,287	-		Sama_3261	0.53	-0.6
3,870,287	-		Sama_3261	0.53	-0.2
3,870,378	+		Sama_3261	0.60	-0.1
3,870,378	+		Sama_3261	0.60	+1.6
3,870,378	+		Sama_3261	0.60	-1.8
3,870,378	+		Sama_3261	0.60	-2.5
3,870,379	-		Sama_3261	0.60	+0.4
3,870,379	-		Sama_3261	0.60	-1.1
3,870,379	-		Sama_3261	0.60	-0.1
3,870,381	+		Sama_3261	0.60	+0.4
3,870,381	+		Sama_3261	0.60	+0.7
3,870,382	-		Sama_3261	0.60	+0.1
3,870,382	-		Sama_3261	0.60	-0.4
3,870,483	+		Sama_3261	0.67	+0.7
3,870,484	-		Sama_3261	0.67	+0.4
3,870,484	-		Sama_3261	0.67	+0.8
3,870,484	-		Sama_3261	0.67	+1.6
3,870,485	+		Sama_3261	0.67	-2.1
3,870,486	-		Sama_3261	0.67	+1.6
3,870,486	-		Sama_3261	0.67	+1.0
3,870,514	+		Sama_3261	0.69	+0.9
3,870,514	+		Sama_3261	0.69	+3.7
3,870,514	+		Sama_3261	0.69	-0.3
3,870,514	+		Sama_3261	0.69	-1.2
3,870,515	-		Sama_3261	0.69	-1.4
3,870,515	-		Sama_3261	0.69	+1.0
3,870,515	-		Sama_3261	0.69	-1.7
3,870,515	-		Sama_3261	0.69	-1.2
3,870,519	+		Sama_3261	0.70	-0.8
3,870,519	+		Sama_3261	0.70	-0.3
3,870,519	+		Sama_3261	0.70	-0.9
3,870,520	-		Sama_3261	0.70	-1.3
3,870,520	-		Sama_3261	0.70	-1.8
3,870,520	-		Sama_3261	0.70	-0.0
3,870,520	-		Sama_3261	0.70	+1.4
3,870,570	+		Sama_3261	0.73	-1.0
3,870,610	-		Sama_3261	0.76	+2.6
3,870,610	-		Sama_3261	0.76	-0.8
3,870,651	+		Sama_3261	0.79	-2.5
3,870,652	-		Sama_3261	0.79	-1.1
3,870,652	-		Sama_3261	0.79	+0.6
3,870,678	+		Sama_3261	0.81	-1.1
3,870,678	+		Sama_3261	0.81	+1.0
3,870,678	+		Sama_3261	0.81	+1.5
3,870,679	-		Sama_3261	0.81	+0.1
3,870,679	-		Sama_3261	0.81	+0.9
3,870,679	-		Sama_3261	0.81	-0.6
3,870,723	+		Sama_3261	0.84	-0.3
3,870,724	-		Sama_3261	0.84	+0.5
3,870,724	-		Sama_3261	0.84	-0.1
3,870,724	-		Sama_3261	0.84	+1.0
3,870,758	-		Sama_3261	0.87	-0.2
3,870,758	-		Sama_3261	0.87	-1.9
3,870,801	-		Sama_3261	0.90	-1.6
3,870,801	-		Sama_3261	0.90	+0.2
3,870,807	+				-2.0
3,870,808	-				-1.0
3,870,808	-				+0.7
3,870,844	-				-0.9
3,870,904	+				-0.1
3,870,924	+				+1.3
3,870,924	+				-1.0
3,870,924	+				-0.9
3,870,924	+				+1.8
3,870,925	-				+0.5
3,870,925	-				+0.2
3,870,925	-				-1.3
3,870,925	-				+1.4
3,870,925	-				+0.3
3,870,938	-				-0.4
3,870,938	-				-1.2
3,870,957	+				-1.0
3,870,957	+				+0.5
3,870,957	+				-2.1
3,870,957	+				+1.2
3,870,958	-				+0.6
3,870,994	+				-0.3
3,871,003	+				+1.4
3,871,004	-				-1.0
3,871,013	-		Sama_3262	0.11	-2.1
3,871,024	+		Sama_3262	0.13	+0.8
3,871,024	+		Sama_3262	0.13	-0.4
3,871,024	+		Sama_3262	0.13	+0.2
3,871,025	-		Sama_3262	0.13	-1.3
3,871,025	-		Sama_3262	0.13	+1.7
3,871,025	-		Sama_3262	0.13	+2.8
3,871,035	+		Sama_3262	0.15	-1.5
3,871,036	-		Sama_3262	0.15	-1.9
3,871,036	-		Sama_3262	0.15	+1.1
3,871,036	-		Sama_3262	0.15	+0.0
3,871,036	-		Sama_3262	0.15	-0.2
3,871,124	+		Sama_3262	0.30	+0.6
3,871,124	+		Sama_3262	0.30	-0.7
3,871,124	+		Sama_3262	0.30	-0.6
3,871,124	+		Sama_3262	0.30	-0.8
3,871,124	+		Sama_3262	0.30	-0.1
3,871,125	-		Sama_3262	0.30	-1.1
3,871,125	-		Sama_3262	0.30	+4.0
3,871,125	-		Sama_3262	0.30	+0.7
3,871,173	+		Sama_3262	0.38	-0.3
3,871,173	+		Sama_3262	0.38	+1.4
3,871,173	+		Sama_3262	0.38	-1.3
3,871,173	+		Sama_3262	0.38	-1.5
3,871,173	+		Sama_3262	0.38	-1.0
3,871,173	+		Sama_3262	0.38	-0.4
3,871,174	-		Sama_3262	0.38	+0.5
3,871,174	-		Sama_3262	0.38	-1.7
3,871,174	-		Sama_3262	0.38	+6.8
3,871,174	-		Sama_3262	0.38	-2.4
3,871,174	-		Sama_3262	0.38	+1.0
3,871,174	-		Sama_3262	0.38	-0.5
3,871,174	-		Sama_3262	0.38	-2.5
3,871,196	+		Sama_3262	0.42	-0.4
3,871,196	+		Sama_3262	0.42	+0.4
3,871,196	+		Sama_3262	0.42	-0.4
3,871,197	-		Sama_3262	0.42	-1.1
3,871,211	+		Sama_3262	0.44	+0.7
3,871,211	+		Sama_3262	0.44	-1.4
3,871,211	+		Sama_3262	0.44	-0.4
3,871,211	+		Sama_3262	0.44	-0.8
3,871,211	+		Sama_3262	0.44	-1.5
3,871,211	+		Sama_3262	0.44	-0.3
3,871,212	-		Sama_3262	0.44	-0.1
3,871,212	-		Sama_3262	0.44	+1.6
3,871,212	-		Sama_3262	0.44	-1.1
3,871,212	-		Sama_3262	0.44	+0.3
3,871,262	-		Sama_3262	0.52	+0.3
3,871,264	+		Sama_3262	0.53	+0.2
3,871,264	+		Sama_3262	0.53	-0.6
3,871,264	+		Sama_3262	0.53	-0.4
3,871,265	-		Sama_3262	0.53	-1.0
3,871,265	-		Sama_3262	0.53	-1.2
3,871,265	-		Sama_3262	0.53	+0.8
3,871,265	-		Sama_3262	0.53	+1.1
3,871,311	-		Sama_3262	0.61	+0.7
3,871,311	-		Sama_3262	0.61	-0.2
3,871,311	-		Sama_3262	0.61	-0.9
3,871,356	+		Sama_3262	0.68	-0.7
3,871,357	-		Sama_3262	0.68	-1.4
3,871,357	-		Sama_3262	0.68	-1.5
3,871,359	+		Sama_3262	0.68	-0.1
3,871,360	-		Sama_3262	0.69	+1.7
3,871,370	+		Sama_3262	0.70	+0.9
3,871,370	+		Sama_3262	0.70	-0.5
3,871,371	-		Sama_3262	0.70	+2.5
3,871,371	-		Sama_3262	0.70	-0.1
3,871,371	-		Sama_3262	0.70	-1.9
3,871,371	-		Sama_3262	0.70	+1.1
3,871,371	-		Sama_3262	0.70	-1.8
3,871,412	+		Sama_3262	0.77	-1.4
3,871,412	+		Sama_3262	0.77	-1.2
3,871,412	+		Sama_3262	0.77	-1.0
3,871,456	+		Sama_3262	0.84	+4.6
3,871,457	-		Sama_3262	0.85	+2.4
3,871,457	-		Sama_3262	0.85	-1.0
3,871,457	-		Sama_3262	0.85	-1.4
3,871,457	-		Sama_3262	0.85	+1.7
3,871,498	+				+0.5
3,871,498	+				-0.3
3,871,499	-				-2.1
3,871,499	-				-0.7
3,871,521	+				-0.4
3,871,521	+				-1.0
3,871,521	+				-0.6
3,871,521	+				+1.5
3,871,521	+				+1.1
3,871,521	+				+3.3
3,871,521	+				-0.3
3,871,522	-				+0.2
3,871,522	-				-1.0
3,871,522	-				-0.4
3,871,522	-				-1.8
3,871,522	-				-0.5
3,871,522	-				+1.7
3,871,522	-				-1.0
3,871,522	-				-1.5
3,871,522	-				+0.0
3,871,522	-				-1.1
3,871,522	-				-0.1
3,871,523	+				-0.4
3,871,523	+				-0.1
3,871,523	+				-0.3
3,871,523	+				+4.8
3,871,523	+				+0.1
3,871,523	+				+4.2
3,871,523	+				+1.2
3,871,523	+				-1.4
3,871,523	+				-2.6
3,871,523	+				-1.7
3,871,523	+				-0.4
3,871,523	+				+0.6
3,871,523	+				+0.2
3,871,523	+				-0.1
3,871,523	+				-1.1
3,871,523	+				+0.5
3,871,523	+				+0.9
3,871,523	+				-1.1
3,871,523	+				+3.6
3,871,523	+				-0.8
3,871,523	+				-2.6
3,871,523	+				-2.7
3,871,523	+				-2.8
3,871,523	+				+0.2
3,871,523	+				+1.2
3,871,523	+				-1.9
3,871,523	+				+4.5
3,871,523	+				+3.4
3,871,523	+				-0.3
3,871,523	+				+1.0
3,871,523	+				+0.1
3,871,523	+				+0.4
3,871,523	+				-0.6
3,871,523	+				-1.8
3,871,523	+				+0.7
3,871,523	+				-1.8
3,871,523	+				+1.4
3,871,523	+				+2.4
3,871,523	+				-0.3
3,871,523	+				+0.2
3,871,524	-				+1.6
3,871,524	-				-0.7
3,871,524	-				+1.1
3,871,524	-				-0.8
3,871,524	-				-1.7
3,871,524	-				-2.8
3,871,524	-				-0.1
3,871,524	-				+0.8
3,871,524	-				+1.0
3,871,524	-				+0.6
3,871,524	-				+2.4
3,871,524	-				-0.0
3,871,524	-				+3.6
3,871,524	-				-0.1
3,871,524	-				+1.9
3,871,524	-				-2.6
3,871,524	-				+0.1
3,871,524	-				-0.3
3,871,524	-				-0.0
3,871,524	-				-1.0
3,871,524	-				-0.6
3,871,524	-				+0.2
3,871,524	-				+0.0
3,871,524	-				+0.8
3,871,524	-				+0.7
3,871,524	-				-1.0
3,871,525	+				-1.8
3,871,525	+				-1.5
3,871,525	+				+0.7
3,871,525	+				+0.5
3,871,525	+				-0.6
3,871,525	+				+3.2
3,871,525	+				-1.9
3,871,525	+				-0.2
3,871,525	+				+0.2
3,871,525	+				-1.1
3,871,525	+				-0.1
3,871,525	+				+0.9
3,871,525	+				-0.6
3,871,525	+				+3.3
3,871,525	+				+1.5
3,871,526	-				+2.4
3,871,526	-				-0.7
3,871,526	-				+2.1
3,871,526	-				-0.3
3,871,526	-				+0.7
3,871,526	-				-1.3
3,871,526	-				+1.2
3,871,562	+				+1.0
3,871,563	-				+1.2
3,871,601	+				+1.7
3,871,601	+				+1.6
3,871,601	+				+0.2
3,871,601	+				-1.4
3,871,602	-				-1.9
3,871,602	-				-0.7
3,871,602	-				+4.6
3,871,668	-		Sama_3263	0.14	-1.2
3,871,668	-		Sama_3263	0.14	+1.3
3,871,668	-		Sama_3263	0.14	+0.7
3,871,668	-		Sama_3263	0.14	-2.6
3,871,713	+		Sama_3263	0.21	-0.1
3,871,713	+		Sama_3263	0.21	+0.6
3,871,713	+		Sama_3263	0.21	-0.4
3,871,714	-		Sama_3263	0.21	-1.3
3,871,714	-		Sama_3263	0.21	-0.3
3,871,714	-		Sama_3263	0.21	+5.0
3,871,714	-		Sama_3263	0.21	+4.5
3,871,817	+		Sama_3263	0.35	+0.1
3,871,818	-		Sama_3263	0.36	+1.0
3,871,844	+		Sama_3263	0.39	+2.6
3,871,845	-		Sama_3263	0.39	+1.2
3,871,845	-		Sama_3263	0.39	+1.6
3,871,845	-		Sama_3263	0.39	+0.6
3,871,866	+		Sama_3263	0.42	+3.9
3,871,866	+		Sama_3263	0.42	-1.6
3,871,866	+		Sama_3263	0.42	-0.4
3,871,866	+		Sama_3263	0.42	+1.8
3,871,867	-		Sama_3263	0.43	+4.6
3,871,867	-		Sama_3263	0.43	+0.2
3,871,935	+		Sama_3263	0.52	+0.5
3,871,935	+		Sama_3263	0.52	+0.0
3,871,936	-		Sama_3263	0.52	-3.3
3,871,936	-		Sama_3263	0.52	-1.7
3,871,936	-		Sama_3263	0.52	-0.3
3,871,958	+		Sama_3263	0.55	-1.3
3,871,958	+		Sama_3263	0.55	-2.1
3,871,959	-		Sama_3263	0.56	-1.6
3,871,961	-		Sama_3263	0.56	-0.6
3,871,990	+		Sama_3263	0.60	+0.4
3,871,990	+		Sama_3263	0.60	-2.0
3,871,991	-		Sama_3263	0.60	+1.6
3,871,991	-		Sama_3263	0.60	+0.6
3,871,991	-		Sama_3263	0.60	+0.5
3,872,013	+		Sama_3263	0.63	-0.4
3,872,013	+		Sama_3263	0.63	+2.7
3,872,013	+		Sama_3263	0.63	-0.1
3,872,031	+		Sama_3263	0.66	-0.7
3,872,031	+		Sama_3263	0.66	+1.3
3,872,031	+		Sama_3263	0.66	-0.3
3,872,032	-		Sama_3263	0.66	-0.9
3,872,034	+		Sama_3263	0.66	+0.2
3,872,035	-		Sama_3263	0.66	-2.0
3,872,035	-		Sama_3263	0.66	-0.1
3,872,035	-		Sama_3263	0.66	+2.3
3,872,035	-		Sama_3263	0.66	-0.9
3,872,053	+		Sama_3263	0.69	-1.2
3,872,063	-		Sama_3263	0.70	+1.3
3,872,124	+		Sama_3263	0.79	-2.0
3,872,127	-		Sama_3263	0.79	-1.1
3,872,152	+		Sama_3263	0.83	+3.1
3,872,230	+				-2.1
3,872,230	+				+0.9
3,872,271	+				-1.0
3,872,271	+				-1.9
3,872,272	-				-1.5
3,872,275	+				-0.7
3,872,281	+				-1.4
3,872,282	-				+1.4
3,872,282	-				+1.3
3,872,282	-				-2.9
3,872,303	+				+1.1
3,872,303	+				+0.8
3,872,303	+				-1.5
3,872,304	-				+0.5
3,872,310	+				+2.2
3,872,334	+				-2.2
3,872,334	+				-0.1
3,872,335	-				+2.5
3,872,335	-				-0.6
3,872,351	+				+0.8
3,872,352	-				+3.0
3,872,352	-				-0.9
3,872,411	-				+3.8
3,872,465	-				-1.7
3,872,488	+		Sama_3264	0.11	-1.3
3,872,488	+		Sama_3264	0.11	-0.2
3,872,489	-		Sama_3264	0.11	+4.4
3,872,489	-		Sama_3264	0.11	+3.6
3,872,489	-		Sama_3264	0.11	+1.5
3,872,489	-		Sama_3264	0.11	+1.5
3,872,510	+		Sama_3264	0.12	+1.0
3,872,510	+		Sama_3264	0.12	-0.7
3,872,511	-		Sama_3264	0.12	-0.1
3,872,513	+		Sama_3264	0.12	+2.1
3,872,514	-		Sama_3264	0.12	+0.4
3,872,514	-		Sama_3264	0.12	-2.5
3,872,514	-		Sama_3264	0.12	-1.4
3,872,548	+		Sama_3264	0.14	+3.0
3,872,549	-		Sama_3264	0.14	+0.0
3,872,549	-		Sama_3264	0.14	-1.1