Strain Fitness in Shewanella amazonensis SB2B around Sama_3186

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,777,349	+		Sama_3185	0.48	+0.5
3,777,349	+		Sama_3185	0.48	-1.2
3,777,459	+		Sama_3185	0.58	+1.2
3,777,489	+		Sama_3185	0.61	-1.6
3,777,528	+		Sama_3185	0.64	-0.8
3,777,528	+		Sama_3185	0.64	-1.3
3,777,528	+		Sama_3185	0.64	+0.7
3,777,528	+		Sama_3185	0.64	+0.9
3,777,528	+		Sama_3185	0.64	-1.2
3,777,528	+		Sama_3185	0.64	-0.2
3,777,528	+		Sama_3185	0.64	+0.2
3,777,529	-		Sama_3185	0.64	-0.7
3,777,529	-		Sama_3185	0.64	+2.0
3,777,529	-		Sama_3185	0.64	-0.7
3,777,529	-		Sama_3185	0.64	-1.5
3,777,531	+		Sama_3185	0.64	+0.9
3,777,531	+		Sama_3185	0.64	+0.4
3,777,531	+		Sama_3185	0.64	-2.2
3,777,531	+		Sama_3185	0.64	+1.5
3,777,531	+		Sama_3185	0.64	+0.5
3,777,531	+		Sama_3185	0.64	+3.2
3,777,531	+		Sama_3185	0.64	-1.7
3,777,531	+		Sama_3185	0.64	+0.9
3,777,532	-		Sama_3185	0.65	-0.1
3,777,532	-		Sama_3185	0.65	-1.7
3,777,532	-		Sama_3185	0.65	+0.1
3,777,532	-		Sama_3185	0.65	+0.8
3,777,532	-		Sama_3185	0.65	-0.0
3,777,532	-		Sama_3185	0.65	+2.0
3,777,532	-		Sama_3185	0.65	-0.7
3,777,532	-		Sama_3185	0.65	+2.3
3,777,765	-		Sama_3185	0.86	-1.3
3,777,765	-		Sama_3185	0.86	-0.4
3,777,765	-		Sama_3185	0.86	-2.8
3,777,765	-		Sama_3185	0.86	-0.7
3,777,765	-		Sama_3185	0.86	-1.4
3,777,765	-		Sama_3185	0.86	+2.0
3,777,781	+		Sama_3185	0.88	-0.2
3,777,819	+				+1.6
3,777,819	+				-1.3
3,777,820	-				-1.0
3,777,830	-				+1.2
3,777,830	-				+0.9
3,777,862	-				-2.0
3,777,915	+				-1.5
3,777,915	+				-1.0
3,777,915	+				+0.7
3,777,916	-				-1.4
3,777,916	-				+0.5
3,777,916	-				-2.3
3,777,916	-				-1.1
3,777,916	-				+0.0
3,777,941	+				+2.1
3,777,942	-				-1.9
3,777,961	-				+0.7
3,777,997	+				-1.1
3,778,073	+				-1.5
3,778,073	+				-1.1
3,778,073	+				+1.4
3,778,073	+				-0.8
3,778,209	+				-1.6
3,778,209	+				+0.0
3,778,209	+				+1.6
3,778,210	-				-0.9
3,778,267	+				-0.1
3,778,299	+				-1.8
3,778,300	-				-0.0
3,778,381	-				-1.0
3,778,410	+		Sama_3186	0.14	+4.8
3,778,410	+		Sama_3186	0.14	-1.2
3,778,410	+		Sama_3186	0.14	-1.1
3,778,410	+		Sama_3186	0.14	-0.4
3,778,411	-		Sama_3186	0.15	-2.1
3,778,411	-		Sama_3186	0.15	-1.9
3,778,411	-		Sama_3186	0.15	+3.1
3,778,411	-		Sama_3186	0.15	-1.7
3,778,411	-		Sama_3186	0.15	-1.4
3,778,438	+		Sama_3186	0.20	-0.7
3,778,438	+		Sama_3186	0.20	-0.1
3,778,439	-		Sama_3186	0.20	+0.3
3,778,566	-		Sama_3186	0.43	-2.3
3,778,570	-		Sama_3186	0.44	+1.0
3,778,570	-		Sama_3186	0.44	+2.5
3,778,633	+		Sama_3186	0.56	+1.5
3,778,633	+		Sama_3186	0.56	-1.3
3,778,633	+		Sama_3186	0.56	+0.7
3,778,634	-		Sama_3186	0.56	+0.5
3,778,634	-		Sama_3186	0.56	+1.6
3,778,634	-		Sama_3186	0.56	-1.3
3,778,649	-		Sama_3186	0.59	-0.5
3,778,823	+				-0.5
3,778,823	+				-1.1
3,778,823	+				+1.2
3,778,830	+				-0.4
3,778,843	-				-2.1
3,778,855	-				+0.0
3,778,855	-				+2.0
3,779,048	+		Sama_3187	0.14	-2.3
3,779,049	-		Sama_3187	0.14	+2.8
3,779,049	-		Sama_3187	0.14	-1.3
3,779,049	-		Sama_3187	0.14	-0.3
3,779,067	+		Sama_3187	0.16	-1.7
3,779,067	+		Sama_3187	0.16	-1.4
3,779,067	+		Sama_3187	0.16	-0.5
3,779,068	-		Sama_3187	0.16	-0.0
3,779,068	-		Sama_3187	0.16	-0.3
3,779,068	-		Sama_3187	0.16	+1.3
3,779,068	-		Sama_3187	0.16	+0.8
3,779,068	-		Sama_3187	0.16	-1.3
3,779,068	-		Sama_3187	0.16	+0.6
3,779,069	+		Sama_3187	0.16	-0.4
3,779,070	-		Sama_3187	0.16	-1.2
3,779,070	-		Sama_3187	0.16	-0.3
3,779,070	-		Sama_3187	0.16	-0.4
3,779,240	+		Sama_3187	0.29	+0.4
3,779,247	+		Sama_3187	0.30	+0.0
3,779,248	-		Sama_3187	0.30	+2.2
3,779,248	-		Sama_3187	0.30	-0.7
3,779,248	-		Sama_3187	0.30	-2.1
3,779,286	+		Sama_3187	0.33	-0.8
3,779,286	+		Sama_3187	0.33	-0.1
3,779,287	-		Sama_3187	0.33	+1.8
3,779,287	-		Sama_3187	0.33	+5.1
3,779,287	-		Sama_3187	0.33	+0.5
3,779,612	+		Sama_3187	0.59	+1.6
3,779,613	-		Sama_3187	0.59	+4.7
3,779,613	-		Sama_3187	0.59	-2.0
3,779,616	+		Sama_3187	0.59	-1.6
3,779,616	+		Sama_3187	0.59	-2.1
3,779,616	+		Sama_3187	0.59	-0.1
3,779,616	+		Sama_3187	0.59	+0.2
3,779,616	+		Sama_3187	0.59	+1.4
3,779,616	+		Sama_3187	0.59	+2.4
3,779,616	+		Sama_3187	0.59	-2.1
3,779,616	+		Sama_3187	0.59	+1.5
3,779,616	+		Sama_3187	0.59	-2.0
3,779,616	+		Sama_3187	0.59	+0.4
3,779,617	-		Sama_3187	0.59	-1.3
3,779,617	-		Sama_3187	0.59	+4.6
3,779,617	-		Sama_3187	0.59	-0.3
3,779,617	-		Sama_3187	0.59	+2.0
3,779,617	-		Sama_3187	0.59	-0.2
3,779,617	-		Sama_3187	0.59	-1.5
3,779,632	-		Sama_3187	0.60	+1.4
3,779,648	+		Sama_3187	0.61	-0.4
3,779,648	+		Sama_3187	0.61	-1.5
3,779,648	+		Sama_3187	0.61	+0.3
3,779,648	+		Sama_3187	0.61	+4.5
3,779,648	+		Sama_3187	0.61	-1.8
3,779,648	+		Sama_3187	0.61	+0.8
3,779,649	-		Sama_3187	0.62	-2.3
3,779,649	-		Sama_3187	0.62	+1.6
3,779,649	-		Sama_3187	0.62	-2.6
3,779,649	-		Sama_3187	0.62	-0.4
3,779,649	-		Sama_3187	0.62	+0.2
3,779,649	-		Sama_3187	0.62	+0.9
3,779,649	-		Sama_3187	0.62	-1.5
3,779,649	-		Sama_3187	0.62	-0.4
3,779,649	-		Sama_3187	0.62	+0.5
3,779,656	+		Sama_3187	0.62	-1.8
3,779,656	+		Sama_3187	0.62	+1.3
3,779,656	+		Sama_3187	0.62	-1.7
3,779,656	+		Sama_3187	0.62	+0.3
3,779,657	-		Sama_3187	0.62	+1.2
3,779,657	-		Sama_3187	0.62	-0.5
3,779,657	-		Sama_3187	0.62	-0.7
3,779,657	-		Sama_3187	0.62	+0.9
3,779,669	+		Sama_3187	0.63	-1.9
3,779,670	-		Sama_3187	0.63	-1.5
3,779,731	+		Sama_3187	0.68	+1.6
3,779,731	+		Sama_3187	0.68	-2.3
3,779,731	+		Sama_3187	0.68	-1.7
3,779,731	+		Sama_3187	0.68	+1.7
3,779,731	+		Sama_3187	0.68	+0.5
3,779,731	+		Sama_3187	0.68	-2.0
3,779,731	+		Sama_3187	0.68	-1.0
3,779,731	+		Sama_3187	0.68	-1.5
3,779,731	+		Sama_3187	0.68	-1.1
3,779,732	-		Sama_3187	0.68	+0.6
3,779,732	-		Sama_3187	0.68	+0.2
3,779,732	-		Sama_3187	0.68	+1.8
3,779,732	-		Sama_3187	0.68	-1.3
3,779,732	-		Sama_3187	0.68	+0.8
3,779,732	-		Sama_3187	0.68	+0.0
3,779,744	+		Sama_3187	0.69	-2.3
3,779,744	+		Sama_3187	0.69	+0.0
3,779,745	-		Sama_3187	0.69	-0.7
3,779,746	+		Sama_3187	0.69	-1.0
3,779,746	+		Sama_3187	0.69	+3.9
3,779,746	+		Sama_3187	0.69	+0.1
3,779,747	-		Sama_3187	0.69	+0.3
3,779,747	-		Sama_3187	0.69	+0.4
3,779,747	-		Sama_3187	0.69	-1.1
3,779,747	-		Sama_3187	0.69	-1.6
3,779,747	-		Sama_3187	0.69	-1.5
3,779,835	+		Sama_3187	0.76	+2.6
3,779,836	-		Sama_3187	0.76	-0.3
3,779,837	+		Sama_3187	0.76	-0.7
3,779,837	+		Sama_3187	0.76	-0.8
3,779,837	+		Sama_3187	0.76	-0.0
3,779,837	+		Sama_3187	0.76	-2.2
3,779,837	+		Sama_3187	0.76	-2.1
3,779,838	-		Sama_3187	0.76	-0.2
3,779,838	-		Sama_3187	0.76	+1.3
3,779,838	-		Sama_3187	0.76	-1.7
3,779,838	-		Sama_3187	0.76	-0.7
3,779,838	-		Sama_3187	0.76	+1.5
3,779,838	-		Sama_3187	0.76	-0.0
3,779,866	+		Sama_3187	0.79	+1.9
3,779,866	+		Sama_3187	0.79	+0.2
3,779,866	+		Sama_3187	0.79	-1.9
3,779,866	+		Sama_3187	0.79	-1.0
3,779,866	+		Sama_3187	0.79	-1.0
3,779,867	-		Sama_3187	0.79	+0.2
3,779,867	-		Sama_3187	0.79	+0.9
3,779,867	-		Sama_3187	0.79	+0.0
3,779,867	-		Sama_3187	0.79	-1.0
3,779,867	-		Sama_3187	0.79	-2.1
3,779,868	+		Sama_3187	0.79	+1.0
3,779,868	+		Sama_3187	0.79	-0.8
3,779,868	+		Sama_3187	0.79	-1.5
3,779,868	+		Sama_3187	0.79	+2.8