Strain Fitness in Shewanella amazonensis SB2B around Sama_3154

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,741,092	-		Sama_3153	0.45	+2.2
3,741,092	-		Sama_3153	0.45	-1.7
3,741,101	+		Sama_3153	0.45	+3.8
3,741,101	+		Sama_3153	0.45	+1.2
3,741,101	+		Sama_3153	0.45	-2.0
3,741,101	+		Sama_3153	0.45	-0.3
3,741,102	-		Sama_3153	0.45	+0.7
3,741,102	-		Sama_3153	0.45	-1.8
3,741,102	-		Sama_3153	0.45	+1.9
3,741,102	-		Sama_3153	0.45	-0.6
3,741,102	-		Sama_3153	0.45	-0.9
3,741,102	-		Sama_3153	0.45	+5.7
3,741,102	-		Sama_3153	0.45	+4.5
3,741,102	-		Sama_3153	0.45	-1.5
3,741,104	-		Sama_3153	0.45	+1.2
3,741,144	+		Sama_3153	0.48	-1.3
3,741,216	+		Sama_3153	0.52	+0.9
3,741,216	+		Sama_3153	0.52	+3.5
3,741,216	+		Sama_3153	0.52	-0.9
3,741,217	-		Sama_3153	0.52	-2.0
3,741,217	-		Sama_3153	0.52	-2.6
3,741,217	-		Sama_3153	0.52	-2.1
3,741,217	-		Sama_3153	0.52	-0.3
3,741,270	+		Sama_3153	0.55	-0.6
3,741,317	-		Sama_3153	0.57	-1.3
3,741,317	-		Sama_3153	0.57	-1.8
3,741,409	+		Sama_3153	0.63	-2.1
3,741,409	+		Sama_3153	0.63	-1.2
3,741,409	+		Sama_3153	0.63	-0.3
3,741,451	-		Sama_3153	0.65	-0.2
3,741,503	-		Sama_3153	0.68	-0.4
3,741,503	-		Sama_3153	0.68	+0.9
3,741,545	-		Sama_3153	0.70	-2.0
3,741,549	+		Sama_3153	0.71	+0.4
3,741,549	+		Sama_3153	0.71	+0.1
3,741,550	-		Sama_3153	0.71	+0.6
3,741,550	-		Sama_3153	0.71	-0.6
3,741,550	-		Sama_3153	0.71	+2.4
3,741,550	-		Sama_3153	0.71	+1.2
3,741,599	+		Sama_3153	0.74	-1.0
3,741,599	+		Sama_3153	0.74	-2.4
3,741,599	+		Sama_3153	0.74	+2.2
3,741,600	-		Sama_3153	0.74	-0.9
3,741,600	-		Sama_3153	0.74	+0.5
3,741,608	+		Sama_3153	0.74	-1.1
3,741,636	-		Sama_3153	0.76	-0.3
3,741,636	-		Sama_3153	0.76	+1.7
3,741,636	-		Sama_3153	0.76	+4.0
3,741,636	-		Sama_3153	0.76	+0.7
3,741,637	+		Sama_3153	0.76	-2.1
3,741,638	-		Sama_3153	0.76	-0.8
3,741,643	+		Sama_3153	0.76	-2.5
3,741,643	+		Sama_3153	0.76	-1.1
3,741,643	+		Sama_3153	0.76	+3.4
3,741,643	+		Sama_3153	0.76	+5.8
3,741,643	+		Sama_3153	0.76	+4.3
3,741,643	+		Sama_3153	0.76	+1.2
3,741,643	+		Sama_3153	0.76	-1.2
3,741,643	+		Sama_3153	0.76	-0.3
3,741,643	+		Sama_3153	0.76	-1.8
3,741,643	+		Sama_3153	0.76	-1.5
3,741,644	-		Sama_3153	0.76	+1.7
3,741,644	-		Sama_3153	0.76	-1.3
3,741,644	-		Sama_3153	0.76	+0.8
3,741,644	-		Sama_3153	0.76	-1.9
3,741,644	-		Sama_3153	0.76	-0.1
3,741,644	-		Sama_3153	0.76	+1.1
3,741,644	-		Sama_3153	0.76	+1.3
3,741,647	+		Sama_3153	0.76	-1.3
3,741,647	+		Sama_3153	0.76	-0.2
3,741,647	+		Sama_3153	0.76	+0.3
3,741,647	+		Sama_3153	0.76	+0.1
3,741,647	+		Sama_3153	0.76	+0.7
3,741,647	+		Sama_3153	0.76	-0.6
3,741,647	+		Sama_3153	0.76	-0.2
3,741,647	+		Sama_3153	0.76	+2.6
3,741,647	+		Sama_3153	0.76	-0.8
3,741,647	+		Sama_3153	0.76	-0.4
3,741,648	-		Sama_3153	0.76	+0.1
3,741,648	-		Sama_3153	0.76	-1.1
3,741,648	-		Sama_3153	0.76	-1.5
3,741,648	-		Sama_3153	0.76	-2.5
3,741,648	-		Sama_3153	0.76	+3.2
3,741,648	-		Sama_3153	0.76	+1.1
3,741,648	-		Sama_3153	0.76	+0.7
3,741,648	-		Sama_3153	0.76	-1.5
3,741,648	-		Sama_3153	0.76	+0.9
3,741,680	+		Sama_3153	0.78	+0.0
3,741,680	+		Sama_3153	0.78	-0.3
3,741,680	+		Sama_3153	0.78	-0.7
3,741,680	+		Sama_3153	0.78	-0.3
3,741,680	+		Sama_3153	0.78	+1.8
3,741,680	+		Sama_3153	0.78	+0.9
3,741,681	-		Sama_3153	0.78	-0.7
3,741,681	-		Sama_3153	0.78	-0.3
3,741,681	-		Sama_3153	0.78	-1.0
3,741,681	-		Sama_3153	0.78	+2.1
3,741,760	+		Sama_3153	0.83	+1.1
3,741,761	-		Sama_3153	0.83	-0.0
3,741,761	-		Sama_3153	0.83	-1.6
3,741,761	-		Sama_3153	0.83	-1.5
3,741,761	-		Sama_3153	0.83	-0.1
3,741,761	-		Sama_3153	0.83	+0.5
3,741,763	+		Sama_3153	0.83	-1.9
3,741,763	+		Sama_3153	0.83	-2.3
3,741,763	+		Sama_3153	0.83	+4.5
3,741,763	+		Sama_3153	0.83	-0.3
3,741,764	-		Sama_3153	0.83	-2.1
3,741,764	-		Sama_3153	0.83	+0.5
3,741,859	+		Sama_3153	0.88	-0.6
3,741,859	+		Sama_3153	0.88	+1.2
3,741,860	-		Sama_3153	0.88	-1.3
3,741,860	-		Sama_3153	0.88	-0.6
3,741,860	-		Sama_3153	0.88	-1.0
3,741,925	-				+0.7
3,741,925	-				-0.0
3,741,925	-				-1.3
3,741,976	+				-2.4
3,741,977	-				-1.5
3,741,977	-				-0.6
3,742,075	-				-0.3
3,742,075	-				-1.6
3,742,075	-				-0.3
3,742,075	-				+2.2
3,742,227	-		Sama_3154	0.29	+0.1
3,742,227	-		Sama_3154	0.29	+1.0
3,742,233	+		Sama_3154	0.30	-0.2
3,742,234	-		Sama_3154	0.31	+0.9
3,742,234	-		Sama_3154	0.31	+1.8
3,742,258	-		Sama_3154	0.35	+0.6
3,742,278	-		Sama_3154	0.39	+2.4
3,742,278	-		Sama_3154	0.39	+0.4
3,742,278	-		Sama_3154	0.39	+0.1
3,742,292	-		Sama_3154	0.42	-1.8
3,742,303	+		Sama_3154	0.44	+1.6
3,742,303	+		Sama_3154	0.44	-2.4
3,742,312	+		Sama_3154	0.46	-2.2
3,742,312	+		Sama_3154	0.46	-0.5
3,742,312	+		Sama_3154	0.46	-0.4
3,742,313	-		Sama_3154	0.46	+0.9
3,742,337	+		Sama_3154	0.50	+0.2
3,742,337	+		Sama_3154	0.50	+1.1
3,742,337	+		Sama_3154	0.50	-0.9
3,742,337	+		Sama_3154	0.50	-0.9
3,742,417	+		Sama_3154	0.66	+0.1
3,742,418	-		Sama_3154	0.66	-0.9
3,742,418	-		Sama_3154	0.66	+0.7
3,742,418	-		Sama_3154	0.66	-0.8
3,742,418	-		Sama_3154	0.66	+1.3
3,742,456	+		Sama_3154	0.73	+2.2
3,742,456	+		Sama_3154	0.73	-1.6
3,742,457	-		Sama_3154	0.73	+4.5
3,742,457	-		Sama_3154	0.73	-1.4
3,742,457	-		Sama_3154	0.73	+1.0
3,742,457	-		Sama_3154	0.73	-1.8
3,742,496	+		Sama_3154	0.81	-2.0
3,742,575	-				+0.6
3,742,597	+				-0.6
3,742,598	-				-3.1
3,742,609	+				+0.9
3,742,610	-				+0.1
3,742,619	-				-2.6
3,742,627	-				+1.4
3,742,664	+				-1.5
3,742,664	+				-2.7
3,742,665	-				-1.2
3,742,669	-				+0.7
3,742,705	+				+1.1
3,742,705	+				+2.7
3,742,706	-				-0.9
3,742,706	-				+1.5
3,742,725	-				+2.1
3,742,738	+				+0.4
3,742,738	+				+0.7
3,742,739	-				-0.3
3,742,767	+				-1.4
3,742,803	+				-1.3
3,742,803	+				-1.2
3,742,804	-				-1.3
3,742,804	-				-0.2
3,742,805	+				-1.3
3,742,805	+				+3.3
3,742,805	+				+1.0
3,742,805	+				-0.3
3,742,805	+				-1.3
3,742,806	-				+4.6
3,742,806	-				+1.0
3,742,806	-				+0.1
3,742,874	+				+1.0
3,742,875	-				+2.1
3,742,878	+				+2.3
3,742,878	+				+0.6
3,742,879	-				-2.3
3,742,879	-				-0.3
3,742,879	-				-2.3
3,742,879	-				-2.4
3,742,879	-				+2.4
3,742,879	-				+0.9
3,742,933	-		Sama_3155	0.18	+1.1
3,742,943	-		Sama_3155	0.20	-1.7
3,742,977	-		Sama_3155	0.26	-1.4
3,742,977	-		Sama_3155	0.26	+0.5
3,743,000	+		Sama_3155	0.31	-0.6
3,743,000	+		Sama_3155	0.31	+0.2
3,743,000	+		Sama_3155	0.31	+0.3
3,743,001	-		Sama_3155	0.31	+1.1
3,743,001	-		Sama_3155	0.31	-1.8
3,743,024	+		Sama_3155	0.35	-1.1
3,743,025	-		Sama_3155	0.36	+3.9
3,743,077	+		Sama_3155	0.46	-1.0
3,743,078	-		Sama_3155	0.46	-2.6
3,743,078	-		Sama_3155	0.46	-0.2
3,743,168	+		Sama_3155	0.64	+0.5
3,743,168	+		Sama_3155	0.64	+4.4
3,743,168	+		Sama_3155	0.64	+0.3
3,743,168	+		Sama_3155	0.64	+0.7
3,743,168	+		Sama_3155	0.64	+4.9
3,743,169	-		Sama_3155	0.64	-1.3
3,743,169	-		Sama_3155	0.64	+1.2
3,743,195	+		Sama_3155	0.69	-1.0
3,743,195	+		Sama_3155	0.69	+1.4
3,743,196	-		Sama_3155	0.69	-0.1
3,743,226	+		Sama_3155	0.75	+0.3
3,743,227	-		Sama_3155	0.75	+0.2
3,743,352	+				-0.3
3,743,352	+				+1.1
3,743,352	+				-1.6
3,743,353	-				+0.2
3,743,353	-				+0.5
3,743,353	-				-0.6
3,743,353	-				+1.0
3,743,353	-				+0.5
3,743,384	-				-2.3
3,743,416	+				+0.8
3,743,416	+				+0.9
3,743,417	-				-1.8
3,743,491	+		Sama_3156	0.10	+0.2
3,743,491	+		Sama_3156	0.10	+3.0
3,743,491	+		Sama_3156	0.10	-2.5
3,743,492	-		Sama_3156	0.10	+1.7
3,743,492	-		Sama_3156	0.10	-0.6
3,743,492	-		Sama_3156	0.10	-0.4
3,743,492	-		Sama_3156	0.10	-0.9
3,743,498	+		Sama_3156	0.12	+1.1
3,743,498	+		Sama_3156	0.12	-1.8
3,743,498	+		Sama_3156	0.12	+3.4
3,743,498	+		Sama_3156	0.12	+1.0
3,743,498	+		Sama_3156	0.12	-0.5
3,743,499	-		Sama_3156	0.12	-0.9
3,743,499	-		Sama_3156	0.12	+0.1
3,743,499	-		Sama_3156	0.12	+1.3
3,743,499	-		Sama_3156	0.12	+2.8
3,743,499	-		Sama_3156	0.12	+1.4
3,743,510	+		Sama_3156	0.15	-0.2
3,743,511	-		Sama_3156	0.15	+0.7
3,743,511	-		Sama_3156	0.15	-1.3
3,743,511	-		Sama_3156	0.15	-0.9
3,743,511	-		Sama_3156	0.15	-0.3
3,743,511	-		Sama_3156	0.15	+0.1
3,743,511	-		Sama_3156	0.15	-2.1
3,743,547	+		Sama_3156	0.24	+3.4
3,743,547	+		Sama_3156	0.24	+2.6
3,743,548	-		Sama_3156	0.24	+3.1
3,743,548	-		Sama_3156	0.24	-1.8
3,743,553	+		Sama_3156	0.25	-0.6
3,743,553	+		Sama_3156	0.25	-1.9
3,743,554	-		Sama_3156	0.26	+0.7
3,743,554	-		Sama_3156	0.26	+0.5
3,743,554	-		Sama_3156	0.26	+1.9
3,743,554	-		Sama_3156	0.26	-0.8
3,743,564	+		Sama_3156	0.28	-0.8
3,743,565	-		Sama_3156	0.28	+1.1
3,743,565	-		Sama_3156	0.28	-1.5
3,743,573	+		Sama_3156	0.30	+5.1
3,743,593	-		Sama_3156	0.35	+0.4
3,743,593	-		Sama_3156	0.35	+0.1
3,743,593	-		Sama_3156	0.35	-0.2