Strain Fitness in Shewanella amazonensis SB2B around Sama_3111

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,685,663	-		Sama_3110	0.73	-0.3
3,685,663	-		Sama_3110	0.73	-0.8
3,685,663	-		Sama_3110	0.73	-0.8
3,685,663	-		Sama_3110	0.73	-2.4
3,685,743	+		Sama_3110	0.76	-0.4
3,685,744	-		Sama_3110	0.76	-0.3
3,685,949	+		Sama_3110	0.82	+3.9
3,685,949	+		Sama_3110	0.82	-0.2
3,685,949	+		Sama_3110	0.82	-0.4
3,685,950	-		Sama_3110	0.82	-1.3
3,685,950	-		Sama_3110	0.82	+0.3
3,685,950	-		Sama_3110	0.82	-0.2
3,685,950	-		Sama_3110	0.82	-0.6
3,685,950	-		Sama_3110	0.82	+0.8
3,685,950	-		Sama_3110	0.82	-2.2
3,685,950	-		Sama_3110	0.82	-0.6
3,685,950	-		Sama_3110	0.82	+2.7
3,685,950	-		Sama_3110	0.82	-1.2
3,685,950	-		Sama_3110	0.82	+1.6
3,685,950	-		Sama_3110	0.82	-1.0
3,685,950	-		Sama_3110	0.82	-1.6
3,685,952	+		Sama_3110	0.82	-0.8
3,685,952	+		Sama_3110	0.82	-2.8
3,685,952	+		Sama_3110	0.82	+1.4
3,685,953	-		Sama_3110	0.82	+0.5
3,685,953	-		Sama_3110	0.82	+0.0
3,686,097	+		Sama_3110	0.86	+0.5
3,686,193	+		Sama_3110	0.89	+0.0
3,686,206	-		Sama_3110	0.89	-1.3
3,686,206	-		Sama_3110	0.89	-0.2
3,686,206	-		Sama_3110	0.89	+0.5
3,686,206	-		Sama_3110	0.89	-0.2
3,686,206	-		Sama_3110	0.89	+2.2
3,686,206	-		Sama_3110	0.89	-0.3
3,686,219	+		Sama_3110	0.89	+2.4
3,686,220	-		Sama_3110	0.90	+1.2
3,686,265	+				-0.7
3,686,265	+				+0.2
3,686,265	+				+0.2
3,686,266	-				+1.3
3,686,266	-				+1.1
3,686,370	+				+0.2
3,686,371	-				-1.2
3,686,371	-				+2.5
3,686,403	+				+2.3
3,686,404	-				+5.4
3,686,414	+				-0.8
3,686,414	+				+3.2
3,686,414	+				-0.2
3,686,415	-				-1.5
3,686,415	-				-1.9
3,686,415	-				-0.2
3,686,415	-				-0.6
3,686,415	-				+0.3
3,686,415	-				-1.3
3,686,458	+				-1.4
3,686,469	+				-0.3
3,686,469	+				+0.8
3,686,469	+				+0.6
3,686,469	+				+2.1
3,686,470	-				-1.4
3,686,470	-				-1.2
3,686,470	-				-2.6
3,686,470	-				-0.4
3,686,502	-				+5.4
3,686,502	-				+0.3
3,686,502	-				+1.0
3,686,502	-				+3.2
3,686,502	-				-1.4
3,686,502	-				-0.2
3,686,502	-				-0.3
3,686,527	+				+0.9
3,686,527	+				+1.1
3,686,527	+				+0.4
3,686,527	+				+4.4
3,686,576	+				-1.4
3,686,576	+				-1.7
3,686,576	+				-2.3
3,686,577	-				-0.0
3,686,577	-				-1.7
3,686,577	-				+0.9
3,686,577	-				+0.0
3,686,609	+				+2.6
3,686,610	-				-0.3
3,686,610	-				+2.9
3,686,630	+				-0.5
3,686,630	+				-1.6
3,686,630	+				-1.1
3,686,631	-				-0.8
3,686,631	-				+3.0
3,686,631	-				+0.7
3,686,648	+				-1.9
3,686,648	+				-0.4
3,686,648	+				+0.2
3,686,649	-				-1.8
3,686,662	+				+3.2
3,686,730	+		Sama_3111	0.15	-1.0
3,686,730	+		Sama_3111	0.15	-0.8
3,686,743	-		Sama_3111	0.17	-0.9
3,686,757	+		Sama_3111	0.18	-1.4
3,686,887	+		Sama_3111	0.31	+0.3
3,686,887	+		Sama_3111	0.31	-2.7
3,686,887	+		Sama_3111	0.31	+1.0
3,686,887	+		Sama_3111	0.31	-2.3
3,686,887	+		Sama_3111	0.31	+3.0
3,686,887	+		Sama_3111	0.31	+3.0
3,686,887	+		Sama_3111	0.31	+0.2
3,686,887	+		Sama_3111	0.31	-0.3
3,686,887	+		Sama_3111	0.31	+0.2
3,686,887	+		Sama_3111	0.31	-0.8
3,686,888	-		Sama_3111	0.31	-2.2
3,686,888	-		Sama_3111	0.31	+1.8
3,686,888	-		Sama_3111	0.31	-2.2
3,686,966	+		Sama_3111	0.39	-0.3
3,686,966	+		Sama_3111	0.39	-0.3
3,686,966	+		Sama_3111	0.39	-2.7
3,686,966	+		Sama_3111	0.39	-1.2
3,686,966	+		Sama_3111	0.39	+4.0
3,686,967	-		Sama_3111	0.39	-1.8
3,686,967	-		Sama_3111	0.39	-1.6
3,687,025	-		Sama_3111	0.45	-0.4
3,687,062	-		Sama_3111	0.49	-3.3
3,687,086	-		Sama_3111	0.51	+0.0
3,687,141	+		Sama_3111	0.57	-2.5
3,687,141	+		Sama_3111	0.57	-2.3
3,687,142	-		Sama_3111	0.57	-1.6
3,687,142	-		Sama_3111	0.57	-3.1
3,687,142	-		Sama_3111	0.57	+0.2
3,687,142	-		Sama_3111	0.57	+0.6
3,687,142	-		Sama_3111	0.57	-1.3
3,687,142	-		Sama_3111	0.57	+3.1
3,687,142	-		Sama_3111	0.57	+3.8
3,687,143	+		Sama_3111	0.57	-0.8
3,687,143	+		Sama_3111	0.57	-1.2
3,687,143	+		Sama_3111	0.57	+2.6
3,687,143	+		Sama_3111	0.57	-0.8
3,687,143	+		Sama_3111	0.57	-0.3
3,687,143	+		Sama_3111	0.57	+0.0
3,687,143	+		Sama_3111	0.57	+1.2
3,687,143	+		Sama_3111	0.57	-0.2
3,687,143	+		Sama_3111	0.57	-2.2
3,687,143	+		Sama_3111	0.57	-0.2
3,687,143	+		Sama_3111	0.57	+0.2
3,687,144	-		Sama_3111	0.57	-1.3
3,687,144	-		Sama_3111	0.57	-0.2
3,687,144	-		Sama_3111	0.57	-2.1
3,687,144	-		Sama_3111	0.57	-0.9
3,687,148	-		Sama_3111	0.58	-0.8
3,687,170	+		Sama_3111	0.60	-0.1
3,687,170	+		Sama_3111	0.60	-0.6
3,687,170	+		Sama_3111	0.60	-0.3
3,687,170	+		Sama_3111	0.60	-1.2
3,687,170	+		Sama_3111	0.60	+0.1
3,687,170	+		Sama_3111	0.60	+3.0
3,687,170	+		Sama_3111	0.60	-0.5
3,687,170	+		Sama_3111	0.60	+4.1
3,687,170	+		Sama_3111	0.60	-1.5
3,687,170	+		Sama_3111	0.60	+1.9
3,687,171	-		Sama_3111	0.60	-0.2
3,687,171	-		Sama_3111	0.60	-1.4
3,687,171	-		Sama_3111	0.60	+0.7
3,687,171	-		Sama_3111	0.60	-2.3
3,687,171	-		Sama_3111	0.60	+2.7
3,687,248	+		Sama_3111	0.68	-0.5
3,687,340	-		Sama_3111	0.77	-0.6
3,687,421	+		Sama_3111	0.85	-1.6
3,687,440	+		Sama_3111	0.87	+0.4
3,687,440	+		Sama_3111	0.87	-0.2
3,687,440	+		Sama_3111	0.87	-0.1
3,687,440	+		Sama_3111	0.87	-0.6
3,687,440	+		Sama_3111	0.87	-1.2
3,687,440	+		Sama_3111	0.87	-1.7
3,687,440	+		Sama_3111	0.87	+0.8
3,687,440	+		Sama_3111	0.87	-2.7
3,687,440	+		Sama_3111	0.87	-0.8
3,687,440	+		Sama_3111	0.87	-0.1
3,687,440	+		Sama_3111	0.87	-1.9
3,687,440	+		Sama_3111	0.87	-0.7
3,687,440	+		Sama_3111	0.87	-1.3
3,687,440	+		Sama_3111	0.87	-0.7
3,687,440	+		Sama_3111	0.87	+1.0
3,687,440	+		Sama_3111	0.87	-0.3
3,687,440	+		Sama_3111	0.87	-0.6
3,687,441	-		Sama_3111	0.87	-1.7
3,687,441	-		Sama_3111	0.87	+0.4
3,687,441	-		Sama_3111	0.87	-0.6
3,687,441	-		Sama_3111	0.87	-2.0
3,687,441	-		Sama_3111	0.87	-0.8
3,687,441	-		Sama_3111	0.87	+2.6
3,687,441	-		Sama_3111	0.87	-1.9
3,687,441	-		Sama_3111	0.87	+4.8
3,687,441	-		Sama_3111	0.87	-2.7
3,687,441	-		Sama_3111	0.87	+3.1
3,687,441	-		Sama_3111	0.87	+2.5
3,687,441	-		Sama_3111	0.87	-0.0
3,687,452	+		Sama_3111	0.89	+0.0
3,687,452	+		Sama_3111	0.89	-0.1
3,687,452	+		Sama_3111	0.89	+0.2
3,687,452	+		Sama_3111	0.89	-0.7
3,687,453	-		Sama_3111	0.89	-0.6
3,687,453	-		Sama_3111	0.89	-2.5
3,687,453	-		Sama_3111	0.89	-0.9
3,687,598	-				-0.8
3,687,626	+				-0.8
3,687,627	-				+0.2
3,687,627	-				+0.7
3,687,632	+				-0.1
3,687,632	+				+1.6
3,687,632	+				+1.4
3,687,632	+				-0.3
3,687,632	+				-2.2
3,687,632	+				-0.9
3,687,633	-				-2.8
3,687,633	-				+4.0
3,687,633	-				+1.3
3,687,717	+				-0.5
3,687,718	-				+0.2
3,687,719	+				-1.1
3,687,719	+				-0.3
3,687,719	+				-0.3
3,687,720	-				+2.2
3,687,720	-				+0.5
3,687,746	+				+0.8
3,687,746	+				-3.1
3,687,746	+				+1.9
3,687,746	+				+0.1
3,687,747	-				+1.1
3,687,747	-				+0.0
3,687,749	+				+1.0
3,687,749	+				-0.3
3,687,749	+				-0.9
3,687,749	+				-2.2
3,687,749	+				-0.8
3,687,749	+				+1.1
3,687,749	+				-0.2
3,687,749	+				+1.3
3,687,750	-				-1.6
3,687,750	-				+3.4
3,687,750	-				+0.1
3,687,750	-				+1.0
3,687,785	+				-0.1
3,687,786	-				+0.5
3,687,786	-				-2.0
3,687,833	+				-1.1
3,687,833	+				+0.1
3,687,833	+				-1.6
3,687,833	+				-1.8
3,687,833	+				-1.6
3,687,833	+				-0.9
3,687,833	+				+0.6
3,687,833	+				-2.3
3,687,834	-				-1.5
3,687,834	-				-2.4
3,687,834	-				-1.9
3,687,834	-				+0.7
3,687,899	+				+0.6
3,687,902	+				+0.6
3,687,902	+				-1.6
3,687,903	-				+1.2
3,687,943	+		Sama_3112	0.12	+0.1
3,687,943	+		Sama_3112	0.12	+1.3
3,687,943	+		Sama_3112	0.12	-0.7
3,687,943	+		Sama_3112	0.12	-1.5
3,687,975	+		Sama_3112	0.14	-2.1
3,687,976	-		Sama_3112	0.14	-1.9
3,687,976	-		Sama_3112	0.14	+3.2
3,687,976	-		Sama_3112	0.14	-0.2
3,687,991	-		Sama_3112	0.15	-0.8
3,687,991	-		Sama_3112	0.15	-1.8
3,687,991	-		Sama_3112	0.15	-1.1
3,687,991	-		Sama_3112	0.15	+1.6
3,687,991	-		Sama_3112	0.15	-1.2
3,687,991	-		Sama_3112	0.15	-0.2
3,688,085	+		Sama_3112	0.21	+0.3
3,688,085	+		Sama_3112	0.21	-0.4
3,688,086	-		Sama_3112	0.21	-1.9
3,688,086	-		Sama_3112	0.21	+1.0
3,688,086	-		Sama_3112	0.21	+0.5
3,688,086	-		Sama_3112	0.21	+0.7
3,688,086	-		Sama_3112	0.21	+1.2
3,688,154	+		Sama_3112	0.26	+0.2
3,688,154	+		Sama_3112	0.26	-0.8
3,688,154	+		Sama_3112	0.26	-0.4
3,688,154	+		Sama_3112	0.26	+1.4
3,688,154	+		Sama_3112	0.26	+2.1
3,688,154	+		Sama_3112	0.26	-0.9
3,688,154	+		Sama_3112	0.26	-1.9
3,688,155	-		Sama_3112	0.26	-0.9
3,688,156	+		Sama_3112	0.26	-2.0
3,688,156	+		Sama_3112	0.26	+1.4
3,688,156	+		Sama_3112	0.26	+1.0
3,688,156	+		Sama_3112	0.26	+0.8
3,688,156	+		Sama_3112	0.26	-0.8
3,688,157	-		Sama_3112	0.26	-0.5
3,688,157	-		Sama_3112	0.26	-1.8
3,688,157	-		Sama_3112	0.26	+2.6
3,688,157	-		Sama_3112	0.26	-1.3
3,688,169	+		Sama_3112	0.27	-2.2
3,688,169	+		Sama_3112	0.27	+0.6
3,688,170	-		Sama_3112	0.27	-1.4
3,688,266	+		Sama_3112	0.33	+0.4
3,688,266	+		Sama_3112	0.33	-0.8
3,688,266	+		Sama_3112	0.33	-0.2
3,688,266	+		Sama_3112	0.33	+1.2
3,688,266	+		Sama_3112	0.33	-0.2
3,688,266	+		Sama_3112	0.33	-1.0
3,688,267	-		Sama_3112	0.33	-1.1
3,688,267	-		Sama_3112	0.33	+0.1
3,688,267	-		Sama_3112	0.33	-0.4
3,688,267	-		Sama_3112	0.33	-1.3
3,688,267	-		Sama_3112	0.33	-0.8
3,688,267	-		Sama_3112	0.33	-1.0
3,688,267	-		Sama_3112	0.33	-0.7
3,688,267	-		Sama_3112	0.33	+0.2
3,688,267	-		Sama_3112	0.33	+2.8
3,688,267	-		Sama_3112	0.33	-2.5
3,688,267	-		Sama_3112	0.33	+0.5
3,688,267	-		Sama_3112	0.33	+0.8
3,688,267	-		Sama_3112	0.33	-0.8
3,688,267	-		Sama_3112	0.33	-3.1
3,688,267	-		Sama_3112	0.33	+1.1
3,688,270	-		Sama_3112	0.33	+1.9
3,688,270	-		Sama_3112	0.33	-0.4
3,688,311	+		Sama_3112	0.36	-0.2
3,688,324	+		Sama_3112	0.37	+0.4
3,688,389	+		Sama_3112	0.41	+1.6
3,688,389	+		Sama_3112	0.41	-0.2
3,688,389	+		Sama_3112	0.41	-1.2
3,688,389	+		Sama_3112	0.41	+0.8
3,688,390	-		Sama_3112	0.41	+0.7
3,688,390	-		Sama_3112	0.41	+1.2
3,688,390	-		Sama_3112	0.41	+0.7
3,688,465	+		Sama_3112	0.46	-1.6
3,688,465	+		Sama_3112	0.46	+0.9
3,688,466	-		Sama_3112	0.46	+0.4