Strain Fitness in Shewanella amazonensis SB2B around Sama_2695

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,221,296	+				+1.5
3,221,296	+				-0.7
3,221,298	-				+2.8
3,221,302	-				-0.6
3,221,302	-				+0.2
3,221,310	+				-1.3
3,221,310	+				+0.7
3,221,356	+				+0.7
3,221,356	+				-1.6
3,221,357	-				+0.5
3,221,357	-				+0.2
3,221,357	-				-0.9
3,221,357	-				-1.6
3,221,399	-				-0.9
3,221,415	-				-1.9
3,221,415	-				-0.0
3,221,448	+				-0.9
3,221,448	+				+0.4
3,221,448	+				+0.6
3,221,448	+				-0.6
3,221,449	-				+0.0
3,221,453	+				-1.3
3,221,453	+				+0.7
3,221,453	+				-1.3
3,221,499	+				+0.0
3,221,499	+				+2.3
3,221,499	+				+2.4
3,221,500	-				-0.6
3,221,500	-				-1.0
3,221,500	-				-0.7
3,221,506	+				-0.2
3,221,506	+				-1.2
3,221,507	-				-0.7
3,221,507	-				-2.7
3,221,520	-				+0.8
3,221,531	+				+0.2
3,221,532	-				-2.0
3,221,532	-				-2.6
3,221,570	+		Sama_2694	0.16	+5.3
3,221,571	-		Sama_2694	0.17	-2.0
3,221,571	-		Sama_2694	0.17	+0.7
3,221,576	+		Sama_2694	0.18	-0.3
3,221,576	+		Sama_2694	0.18	+0.4
3,221,576	+		Sama_2694	0.18	+0.3
3,221,577	-		Sama_2694	0.18	-1.7
3,221,577	-		Sama_2694	0.18	-0.7
3,221,707	+		Sama_2694	0.44	+0.4
3,221,707	+		Sama_2694	0.44	-1.6
3,221,708	-		Sama_2694	0.44	+1.4
3,221,708	-		Sama_2694	0.44	-2.1
3,221,774	+		Sama_2694	0.57	-1.8
3,221,775	-		Sama_2694	0.57	-1.0
3,221,775	-		Sama_2694	0.57	+4.2
3,221,825	+		Sama_2694	0.67	-1.6
3,221,825	+		Sama_2694	0.67	-0.0
3,221,890	+		Sama_2694	0.80	-1.5
3,221,890	+		Sama_2694	0.80	-0.5
3,221,890	+		Sama_2694	0.80	+4.6
3,221,890	+		Sama_2694	0.80	-0.3
3,221,891	-		Sama_2694	0.80	+4.5
3,221,891	-		Sama_2694	0.80	-1.3
3,221,891	-		Sama_2694	0.80	-0.8
3,221,986	+				+0.3
3,222,123	-				-0.1
3,222,132	+				-0.7
3,222,132	+				-0.3
3,222,132	+				-1.3
3,222,133	-				-2.1
3,222,133	-				-1.2
3,222,149	+				+0.4
3,222,179	+				-1.2
3,222,179	+				-0.6
3,222,182	+				-2.3
3,222,205	+				+0.0
3,222,226	+				+0.3
3,222,227	-				-2.2
3,222,227	-				+0.0
3,222,228	+				-0.2
3,222,228	+				-0.6
3,222,228	+				-1.2
3,222,228	+				-0.9
3,222,228	+				-0.2
3,222,228	+				+0.6
3,222,228	+				-1.1
3,222,228	+				+0.2
3,222,228	+				-0.1
3,222,228	+				+1.1
3,222,228	+				+0.0
3,222,229	-				-2.0
3,222,229	-				+0.6
3,222,229	-				-0.9
3,222,229	-				-0.1
3,222,229	-				-1.8
3,222,229	-				-0.9
3,222,229	-				-0.2
3,222,229	-				+1.0
3,222,229	-				+1.6
3,222,229	-				+2.0
3,222,229	-				+5.9
3,222,229	-				+2.5
3,222,229	-				-0.1
3,222,229	-				-1.4
3,222,229	-				-2.2
3,222,229	-				-0.3
3,222,269	+				+0.2
3,222,270	-				+1.4
3,222,370	+		Sama_2695	0.20	-1.6
3,222,370	+		Sama_2695	0.20	-1.0
3,222,371	-		Sama_2695	0.20	+1.0
3,222,371	-		Sama_2695	0.20	-1.4
3,222,371	-		Sama_2695	0.20	+3.3
3,222,371	-		Sama_2695	0.20	-0.8
3,222,371	-		Sama_2695	0.20	+0.4
3,222,414	+		Sama_2695	0.26	+0.8
3,222,414	+		Sama_2695	0.26	+1.7
3,222,415	-		Sama_2695	0.26	-0.3
3,222,415	-		Sama_2695	0.26	+0.7
3,222,415	-		Sama_2695	0.26	-2.3
3,222,415	-		Sama_2695	0.26	-0.4
3,222,456	+		Sama_2695	0.31	+0.4
3,222,457	-		Sama_2695	0.31	-0.5
3,222,457	-		Sama_2695	0.31	-2.0
3,222,490	-		Sama_2695	0.36	-0.9
3,222,490	-		Sama_2695	0.36	+4.0
3,222,490	-		Sama_2695	0.36	-2.5
3,222,490	-		Sama_2695	0.36	-1.1
3,222,524	+		Sama_2695	0.40	-1.0
3,222,524	+		Sama_2695	0.40	-0.1
3,222,524	+		Sama_2695	0.40	-0.7
3,222,525	-		Sama_2695	0.40	+2.6
3,222,594	+		Sama_2695	0.49	-1.1
3,222,594	+		Sama_2695	0.49	+0.0
3,222,595	-		Sama_2695	0.49	-1.1
3,222,595	-		Sama_2695	0.49	-1.5
3,222,595	-		Sama_2695	0.49	-1.7
3,222,595	-		Sama_2695	0.49	-0.7
3,222,595	-		Sama_2695	0.49	+2.8
3,222,595	-		Sama_2695	0.49	-2.3
3,222,662	-		Sama_2695	0.58	-0.7
3,222,662	-		Sama_2695	0.58	-1.6
3,222,662	-		Sama_2695	0.58	-0.6
3,222,668	+		Sama_2695	0.59	+0.8
3,222,669	-		Sama_2695	0.59	-0.1
3,222,669	-		Sama_2695	0.59	+2.0
3,222,708	+		Sama_2695	0.64	-1.3
3,222,709	-		Sama_2695	0.64	+1.0
3,222,709	-		Sama_2695	0.64	-0.5
3,222,710	+		Sama_2695	0.64	-1.1
3,222,710	+		Sama_2695	0.64	+3.8
3,222,710	+		Sama_2695	0.64	-1.1
3,222,710	+		Sama_2695	0.64	+1.9
3,222,710	+		Sama_2695	0.64	-0.5
3,222,710	+		Sama_2695	0.64	-1.0
3,222,711	-		Sama_2695	0.64	-2.6
3,222,711	-		Sama_2695	0.64	+0.4
3,222,711	-		Sama_2695	0.64	+1.8
3,222,711	-		Sama_2695	0.64	-1.1
3,222,711	-		Sama_2695	0.64	+2.9
3,222,713	+		Sama_2695	0.65	-0.8
3,222,713	+		Sama_2695	0.65	+0.6
3,222,713	+		Sama_2695	0.65	+0.2
3,222,713	+		Sama_2695	0.65	+1.4
3,222,713	+		Sama_2695	0.65	-2.1
3,222,713	+		Sama_2695	0.65	+1.6
3,222,713	+		Sama_2695	0.65	+1.1
3,222,713	+		Sama_2695	0.65	+0.1
3,222,713	+		Sama_2695	0.65	-2.5
3,222,713	+		Sama_2695	0.65	-1.4
3,222,713	+		Sama_2695	0.65	+0.2
3,222,714	-		Sama_2695	0.65	+0.7
3,222,714	-		Sama_2695	0.65	-0.4
3,222,714	-		Sama_2695	0.65	+1.0
3,222,714	-		Sama_2695	0.65	-0.3
3,222,714	-		Sama_2695	0.65	+0.4
3,222,714	-		Sama_2695	0.65	+0.2
3,222,714	-		Sama_2695	0.65	-1.0
3,222,714	-		Sama_2695	0.65	-0.9
3,222,714	-		Sama_2695	0.65	-1.7
3,222,714	-		Sama_2695	0.65	-2.7
3,222,714	-		Sama_2695	0.65	-1.1
3,222,724	+		Sama_2695	0.66	-0.3
3,222,725	-		Sama_2695	0.66	-0.8
3,222,725	-		Sama_2695	0.66	+1.5
3,222,725	-		Sama_2695	0.66	-1.1
3,222,738	+		Sama_2695	0.68	+0.4
3,222,739	-		Sama_2695	0.68	+1.7
3,222,837	-		Sama_2695	0.81	+0.7
3,222,837	-		Sama_2695	0.81	-0.8
3,222,865	-		Sama_2695	0.84	-2.6
3,222,886	+		Sama_2695	0.87	-1.2
3,222,961	-				+0.4
3,222,982	+				+0.4
3,222,982	+				+0.1
3,222,983	-				-2.8
3,222,999	-				-0.6
3,223,069	+				+0.0
3,223,069	+				+1.7
3,223,069	+				-2.0
3,223,069	+				-0.2
3,223,069	+				+1.0
3,223,069	+				-0.2
3,223,070	-				-2.2
3,223,070	-				+3.0
3,223,070	-				-1.2
3,223,070	-				-0.3
3,223,070	-				+1.1
3,223,070	-				-2.5
3,223,070	-				-0.8
3,223,070	-				+0.5
3,223,070	-				+1.9
3,223,070	-				-0.5
3,223,070	-				+1.7
3,223,070	-				-0.3
3,223,070	-				+3.5
3,223,070	-				+0.4
3,223,070	-				-0.3
3,223,070	-				-2.0
3,223,070	-				+0.3
3,223,070	-				+2.1
3,223,070	-				-0.2
3,223,070	-				-0.3
3,223,072	+				-1.3
3,223,143	-				+0.5
3,223,143	-				-2.1
3,223,143	-				-1.8
3,223,143	-				-1.3
3,223,146	+				-1.4
3,223,147	-				-2.4
3,223,147	-				+0.4
3,223,165	+				-0.5
3,223,165	+				+0.0
3,223,166	-				-2.8
3,223,166	-				-0.2
3,223,179	-				-2.1
3,223,179	-				+2.1
3,223,179	-				+1.7
3,223,225	+				-1.0
3,223,236	+				+0.2
3,223,299	+				-0.1
3,223,299	+				-0.6
3,223,300	-				+3.9
3,223,300	-				+3.9
3,223,300	-				-2.0
3,223,300	-				+3.1
3,223,320	+				-2.6
3,223,321	-				-0.3
3,223,321	-				-1.9
3,223,321	-				-2.9
3,223,321	-				-1.9
3,223,331	+				-1.1
3,223,331	+				-0.3
3,223,331	+				-0.4
3,223,331	+				+1.4
3,223,331	+				+1.5
3,223,331	+				-0.1
3,223,332	-				+3.1
3,223,332	-				-0.8
3,223,351	-				+2.0
3,223,374	+				-0.7
3,223,375	-				+1.3
3,223,375	-				+0.9
3,223,376	+				+2.0
3,223,376	+				-1.3
3,223,376	+				+0.8
3,223,376	+				-2.1
3,223,376	+				-1.0
3,223,376	+				-0.8
3,223,376	+				+1.6
3,223,377	-				+0.6
3,223,377	-				-1.1
3,223,377	-				+1.6
3,223,377	-				-1.8
3,223,377	-				-0.6
3,223,377	-				-0.1
3,223,377	-				+3.1
3,223,377	-				+1.2
3,223,377	-				-2.1
3,223,377	-				-3.6
3,223,377	-				+0.8
3,223,515	+				+0.0
3,223,516	-				-0.9
3,223,526	+				-0.2
3,223,526	+				-0.6
3,223,527	-				-0.4
3,223,527	-				+4.3
3,223,527	-				+1.1
3,223,548	-				+3.2
3,223,548	-				-2.2
3,223,548	-				-1.6
3,223,616	+				-1.9
3,223,616	+				-0.5
3,223,617	-				+1.4
3,223,625	-				-0.8
3,223,641	+				+0.0
3,223,642	-				+4.6
3,223,642	-				-1.2
3,223,655	+				-0.2
3,223,656	-				+0.4
3,223,679	-				-1.8
3,223,679	-				-0.4
3,223,679	-				-1.0
3,223,679	-				+2.1
3,223,679	-				-2.3
3,223,761	+				-1.2
3,223,762	-				+0.1
3,223,762	-				-0.3
3,223,903	+				-0.3
3,223,976	+				-0.3
3,223,977	-				-1.1