Strain Fitness in Shewanella amazonensis SB2B around Sama_2458

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
2,965,448	-		Sama_2457	0.39	-0.5
2,965,448	-		Sama_2457	0.39	-1.4
2,965,471	+		Sama_2457	0.41	+1.2
2,965,471	+		Sama_2457	0.41	+3.9
2,965,471	+		Sama_2457	0.41	-1.6
2,965,472	-		Sama_2457	0.41	+3.1
2,965,472	-		Sama_2457	0.41	-0.4
2,965,472	-		Sama_2457	0.41	-0.4
2,965,472	-		Sama_2457	0.41	+0.6
2,965,472	-		Sama_2457	0.41	-1.1
2,965,472	-		Sama_2457	0.41	-2.0
2,965,472	-		Sama_2457	0.41	+1.5
2,965,560	+		Sama_2457	0.47	-1.5
2,965,619	+		Sama_2457	0.51	+2.4
2,965,619	+		Sama_2457	0.51	-0.6
2,965,619	+		Sama_2457	0.51	-1.1
2,965,620	-		Sama_2457	0.51	+1.2
2,965,620	-		Sama_2457	0.51	+1.0
2,965,620	-		Sama_2457	0.51	+0.5
2,965,620	-		Sama_2457	0.51	+0.6
2,965,620	-		Sama_2457	0.51	-0.5
2,965,620	-		Sama_2457	0.51	+0.5
2,965,793	+		Sama_2457	0.63	-0.2
2,965,875	+		Sama_2457	0.68	-0.8
2,965,923	+		Sama_2457	0.71	+0.8
2,965,924	-		Sama_2457	0.71	-0.0
2,965,924	-		Sama_2457	0.71	+0.6
2,965,945	+		Sama_2457	0.73	-0.2
2,965,946	-		Sama_2457	0.73	-0.1
2,965,946	-		Sama_2457	0.73	-1.1
2,965,958	+		Sama_2457	0.74	-0.3
2,965,959	+		Sama_2457	0.74	-1.3
2,965,983	+		Sama_2457	0.75	-0.7
2,965,984	-		Sama_2457	0.75	-1.2
2,965,984	-		Sama_2457	0.75	-0.4
2,965,987	+		Sama_2457	0.76	+4.6
2,965,987	+		Sama_2457	0.76	-0.3
2,965,987	+		Sama_2457	0.76	-1.3
2,965,987	+		Sama_2457	0.76	-1.7
2,965,987	+		Sama_2457	0.76	-1.6
2,965,987	+		Sama_2457	0.76	+1.0
2,966,035	+		Sama_2457	0.79	+0.3
2,966,035	+		Sama_2457	0.79	+3.4
2,966,076	-		Sama_2457	0.82	-2.3
2,966,101	+		Sama_2457	0.83	-0.8
2,966,176	+		Sama_2457	0.88	+0.1
2,966,267	+				+1.5
2,966,267	+				+1.6
2,966,268	-				+0.6
2,966,268	-				+0.8
2,966,268	-				-0.3
2,966,277	+				-0.4
2,966,277	+				+5.1
2,966,286	+				-1.3
2,966,306	-				-2.0
2,966,306	-				+0.4
2,966,361	+				+2.1
2,966,361	+				-0.3
2,966,361	+				-0.2
2,966,361	+				+1.2
2,966,362	-				-3.3
2,966,362	-				-1.0
2,966,362	-				-1.5
2,966,362	-				+2.4
2,966,362	-				+0.8
2,966,363	+				+0.2
2,966,363	+				+2.9
2,966,364	-				+2.4
2,966,364	-				-1.5
2,966,391	+				+2.9
2,966,392	-				-1.7
2,966,392	-				-1.5
2,966,392	-				-1.3
2,966,392	-				-0.9
2,966,473	+				-0.7
2,966,473	+				-0.7
2,966,474	-				+0.2
2,966,474	-				-0.0
2,966,536	+				-2.2
2,966,561	+				+0.9
2,966,561	+				+2.8
2,966,568	+				-1.5
2,966,568	+				-1.0
2,966,568	+				-0.4
2,966,568	+				-1.1
2,966,568	+				+0.8
2,966,569	-				-1.1
2,966,569	-				-1.5
2,966,569	-				+1.1
2,966,610	+		Sama_2458	0.13	-0.3
2,966,611	-		Sama_2458	0.13	+1.2
2,966,611	-		Sama_2458	0.13	+0.1
2,966,626	+		Sama_2458	0.14	-1.3
2,966,638	+		Sama_2458	0.15	+1.2
2,966,638	+		Sama_2458	0.15	-0.4
2,966,639	-		Sama_2458	0.15	-0.7
2,966,639	-		Sama_2458	0.15	+1.9
2,966,659	+		Sama_2458	0.17	-0.4
2,966,659	+		Sama_2458	0.17	-3.1
2,966,659	+		Sama_2458	0.17	+0.7
2,966,659	+		Sama_2458	0.17	-0.2
2,966,659	+		Sama_2458	0.17	-0.3
2,966,659	+		Sama_2458	0.17	+1.9
2,966,659	+		Sama_2458	0.17	-2.0
2,966,660	-		Sama_2458	0.17	-1.0
2,966,660	-		Sama_2458	0.17	+5.2
2,966,660	-		Sama_2458	0.17	-0.1
2,966,660	-		Sama_2458	0.17	-1.3
2,966,660	-		Sama_2458	0.17	-1.3
2,966,660	-		Sama_2458	0.17	+0.0
2,966,660	-		Sama_2458	0.17	+1.4
2,966,660	-		Sama_2458	0.17	+2.1
2,966,660	-		Sama_2458	0.17	-2.2
2,966,660	-		Sama_2458	0.17	+0.2
2,966,660	-		Sama_2458	0.17	-2.3
2,966,660	-		Sama_2458	0.17	-2.0
2,966,660	-		Sama_2458	0.17	-0.2
2,966,660	-		Sama_2458	0.17	+0.4
2,966,672	+		Sama_2458	0.18	-0.9
2,966,672	+		Sama_2458	0.18	-2.3
2,966,672	+		Sama_2458	0.18	-2.6
2,966,672	+		Sama_2458	0.18	-0.0
2,966,672	+		Sama_2458	0.18	-2.6
2,966,672	+		Sama_2458	0.18	-1.0
2,966,672	+		Sama_2458	0.18	-1.3
2,966,672	+		Sama_2458	0.18	+2.0
2,966,673	-		Sama_2458	0.18	-1.9
2,966,673	-		Sama_2458	0.18	+1.7
2,966,673	-		Sama_2458	0.18	+1.5
2,966,715	+		Sama_2458	0.21	+0.4
2,966,805	+		Sama_2458	0.28	+0.1
2,966,857	+		Sama_2458	0.31	-0.3
2,966,857	+		Sama_2458	0.31	+2.5
2,966,857	+		Sama_2458	0.31	+1.1
2,966,857	+		Sama_2458	0.31	+0.6
2,966,857	+		Sama_2458	0.31	+1.6
2,966,857	+		Sama_2458	0.31	-1.0
2,966,858	-		Sama_2458	0.32	-2.0
2,966,858	-		Sama_2458	0.32	-0.0
2,966,858	-		Sama_2458	0.32	-1.7
2,966,858	-		Sama_2458	0.32	-0.3
2,966,858	-		Sama_2458	0.32	+0.6
2,966,860	+		Sama_2458	0.32	-1.2
2,966,860	+		Sama_2458	0.32	-2.5
2,966,860	+		Sama_2458	0.32	+2.7
2,966,860	+		Sama_2458	0.32	+1.2
2,966,861	-		Sama_2458	0.32	-0.4
2,966,861	-		Sama_2458	0.32	+1.7
2,966,861	-		Sama_2458	0.32	+2.5
2,966,861	-		Sama_2458	0.32	+2.8
2,966,861	-		Sama_2458	0.32	+0.7
2,966,861	-		Sama_2458	0.32	-1.0
2,966,861	-		Sama_2458	0.32	+1.2
2,966,861	-		Sama_2458	0.32	+2.5
2,966,864	+		Sama_2458	0.32	-1.1
2,966,865	-		Sama_2458	0.32	-2.7
2,966,900	-		Sama_2458	0.35	-0.4
2,966,900	-		Sama_2458	0.35	+3.1
2,966,900	-		Sama_2458	0.35	+1.6
2,966,900	-		Sama_2458	0.35	+1.0
2,966,901	+		Sama_2458	0.35	+3.0
2,966,946	+		Sama_2458	0.38	-0.4
2,966,947	-		Sama_2458	0.38	-1.5
2,967,008	+		Sama_2458	0.43	+4.3
2,967,010	+		Sama_2458	0.43	+1.8
2,967,010	+		Sama_2458	0.43	-0.6
2,967,011	-		Sama_2458	0.43	-1.9
2,967,011	-		Sama_2458	0.43	-2.0
2,967,107	+		Sama_2458	0.50	+0.8
2,967,107	+		Sama_2458	0.50	-0.2
2,967,107	+		Sama_2458	0.50	-0.3
2,967,107	+		Sama_2458	0.50	-2.1
2,967,108	-		Sama_2458	0.50	+0.6
2,967,154	+		Sama_2458	0.54	+1.6
2,967,155	-		Sama_2458	0.54	-0.7
2,967,215	-		Sama_2458	0.58	-1.9
2,967,235	+		Sama_2458	0.60	-0.4
2,967,263	+		Sama_2458	0.62	+2.3
2,967,296	+		Sama_2458	0.64	+0.9
2,967,297	-		Sama_2458	0.65	-2.6
2,967,350	+		Sama_2458	0.69	-1.2
2,967,351	-		Sama_2458	0.69	-2.4
2,967,356	-		Sama_2458	0.69	+0.8
2,967,375	-		Sama_2458	0.70	+2.2
2,967,375	-		Sama_2458	0.70	-0.6
2,967,381	+		Sama_2458	0.71	-0.8
2,967,381	+		Sama_2458	0.71	+0.3
2,967,381	+		Sama_2458	0.71	+2.8
2,967,381	+		Sama_2458	0.71	-0.1
2,967,381	+		Sama_2458	0.71	+1.1
2,967,398	+		Sama_2458	0.72	-2.0
2,967,439	+		Sama_2458	0.75	-2.0
2,967,439	+		Sama_2458	0.75	-0.6
2,967,440	-		Sama_2458	0.75	-2.1
2,967,440	-		Sama_2458	0.75	+2.3
2,967,487	+		Sama_2458	0.79	+2.2
2,967,488	-		Sama_2458	0.79	-1.3
2,967,509	+		Sama_2458	0.81	+1.7
2,967,510	-		Sama_2458	0.81	+0.1
2,967,510	-		Sama_2458	0.81	+5.2
2,967,513	+		Sama_2458	0.81	-0.4
2,967,514	-		Sama_2458	0.81	-2.3
2,967,514	-		Sama_2458	0.81	+2.3
2,967,514	-		Sama_2458	0.81	-0.5
2,967,527	+		Sama_2458	0.82	+0.6
2,967,528	-		Sama_2458	0.82	+0.2
2,967,528	-		Sama_2458	0.82	-0.7
2,967,567	+		Sama_2458	0.85	-1.0
2,967,567	+		Sama_2458	0.85	-1.7
2,967,601	+		Sama_2458	0.87	-0.3
2,967,601	+		Sama_2458	0.87	+0.7
2,967,601	+		Sama_2458	0.87	+0.8
2,967,602	-		Sama_2458	0.88	-1.8
2,967,602	-		Sama_2458	0.88	+3.3
2,967,604	+		Sama_2458	0.88	+0.3
2,967,604	+		Sama_2458	0.88	+1.2
2,967,687	+				-2.0
2,967,754	-				+2.1
2,967,763	+				-0.5
2,967,763	+				+1.1
2,967,763	+				-0.8
2,967,764	-				+2.3
2,967,769	+				-2.1
2,967,769	+				-1.2
2,967,770	-				-1.8
2,967,770	-				-2.5
2,967,833	+		Sama_2459	0.11	+1.6
2,967,833	+		Sama_2459	0.11	-1.6
2,967,833	+		Sama_2459	0.11	-2.0
2,967,834	-		Sama_2459	0.11	-1.7
2,967,834	-		Sama_2459	0.11	+2.2
2,967,834	-		Sama_2459	0.11	+0.0
2,967,842	-		Sama_2459	0.13	+0.1
2,967,851	+		Sama_2459	0.14	-0.1
2,967,887	+		Sama_2459	0.20	-1.6
2,967,887	+		Sama_2459	0.20	+1.3
2,967,888	-		Sama_2459	0.21	-1.8
2,967,890	+		Sama_2459	0.21	-2.3
2,967,891	-		Sama_2459	0.21	+0.9
2,967,916	+		Sama_2459	0.25	+0.3
2,967,916	+		Sama_2459	0.25	-1.0
2,967,917	-		Sama_2459	0.25	-1.3
2,967,951	+		Sama_2459	0.31	-0.7
2,968,031	+		Sama_2459	0.45	-1.0
2,968,055	+		Sama_2459	0.49	-0.8
2,968,056	-		Sama_2459	0.49	+3.1
2,968,069	+		Sama_2459	0.51	+0.6
2,968,070	-		Sama_2459	0.52	-0.1
2,968,148	+		Sama_2459	0.65	-1.0
2,968,148	+		Sama_2459	0.65	+0.9
2,968,245	+		Sama_2459	0.82	-1.5
2,968,290	+		Sama_2459	0.89	+4.8
2,968,420	+				+0.3
2,968,420	+				+1.4
2,968,458	+				-2.4
2,968,458	+				-1.0
2,968,458	+				-1.1
2,968,458	+				+1.5
2,968,459	-				-0.1
2,968,459	-				+1.9
2,968,459	-				-0.8
2,968,499	+				-1.6
2,968,499	+				-0.1
2,968,505	+				-0.5