Strain Fitness in Shewanella amazonensis SB2B around Sama_1321

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
1,606,500	+		Sama_1320	0.69	+0.1
1,606,503	+		Sama_1320	0.69	-0.2
1,606,512	+		Sama_1320	0.70	-0.1
1,606,512	+		Sama_1320	0.70	-0.6
1,606,513	-		Sama_1320	0.70	-0.2
1,606,513	-		Sama_1320	0.70	-0.5
1,606,513	-		Sama_1320	0.70	-0.5
1,606,558	+		Sama_1320	0.72	-1.7
1,606,580	+		Sama_1320	0.73	-0.3
1,606,581	-		Sama_1320	0.73	-0.7
1,606,627	+		Sama_1320	0.74	-1.2
1,606,628	-		Sama_1320	0.75	-1.9
1,606,628	-		Sama_1320	0.75	-3.1
1,606,628	-		Sama_1320	0.75	-1.9
1,606,656	+		Sama_1320	0.76	-0.3
1,606,656	+		Sama_1320	0.76	-1.0
1,606,656	+		Sama_1320	0.76	-0.2
1,606,656	+		Sama_1320	0.76	+0.7
1,606,686	-		Sama_1320	0.77	+0.8
1,606,699	+		Sama_1320	0.77	-1.2
1,606,699	+		Sama_1320	0.77	-1.4
1,606,699	+		Sama_1320	0.77	+0.4
1,606,700	-		Sama_1320	0.77	-0.4
1,606,790	+		Sama_1320	0.81	-1.6
1,606,797	+		Sama_1320	0.81	+3.4
1,606,797	+		Sama_1320	0.81	+4.9
1,606,797	+		Sama_1320	0.81	-0.0
1,606,798	-		Sama_1320	0.81	-1.7
1,606,798	-		Sama_1320	0.81	-2.2
1,606,798	-		Sama_1320	0.81	-2.4
1,606,980	-		Sama_1320	0.89	-1.1
1,606,986	-		Sama_1320	0.89	-0.9
1,607,051	+				+1.7
1,607,051	+				+0.3
1,607,051	+				+2.8
1,607,101	-				-0.4
1,607,101	-				+0.7
1,607,118	-				+0.9
1,607,121	+				-2.4
1,607,121	+				-1.2
1,607,121	+				+0.1
1,607,121	+				+0.2
1,607,121	+				-0.4
1,607,121	+				+3.1
1,607,122	-				-0.7
1,607,122	-				-1.1
1,607,122	-				+0.4
1,607,122	-				-1.7
1,607,122	-				+0.2
1,607,122	-				-1.7
1,607,198	+				+0.8
1,607,198	+				-1.1
1,607,227	+				+1.7
1,607,227	+				-1.8
1,607,227	+				+3.8
1,607,227	+				+1.7
1,607,250	+				+0.9
1,607,250	+				-0.8
1,607,250	+				-2.3
1,607,251	-				-1.2
1,607,251	-				-1.5
1,607,251	-				+0.3
1,607,295	+				+2.7
1,607,296	-				+0.7
1,607,315	-				-0.2
1,607,389	-				+3.6
1,607,389	-				+3.8
1,607,396	-				-0.9
1,607,575	-				-1.5
1,607,575	-				+0.3
1,607,575	-				-2.2
1,607,601	-				+2.3
1,607,670	+		Sama_1321	0.13	-0.3
1,607,670	+		Sama_1321	0.13	+1.4
1,607,774	-		Sama_1321	0.21	+0.9
1,607,774	-		Sama_1321	0.21	+2.0
1,607,778	+		Sama_1321	0.21	+1.9
1,607,816	+		Sama_1321	0.24	+0.8
1,607,817	-		Sama_1321	0.24	-2.1
1,607,817	-		Sama_1321	0.24	+1.3
1,607,817	-		Sama_1321	0.24	-1.3
1,607,822	-		Sama_1321	0.24	-0.2
1,607,822	-		Sama_1321	0.24	-0.3
1,607,822	-		Sama_1321	0.24	-0.7
1,607,822	-		Sama_1321	0.24	+0.4
1,607,822	-		Sama_1321	0.24	-1.6
1,607,862	+		Sama_1321	0.27	-0.5
1,607,863	-		Sama_1321	0.27	+0.3
1,607,863	-		Sama_1321	0.27	+1.7
1,607,877	-		Sama_1321	0.29	+0.2
1,607,895	+		Sama_1321	0.30	-1.6
1,607,896	-		Sama_1321	0.30	+0.6
1,607,896	-		Sama_1321	0.30	-1.3
1,607,914	+		Sama_1321	0.31	+0.3
1,607,914	+		Sama_1321	0.31	+2.7
1,607,914	+		Sama_1321	0.31	-2.9
1,607,922	+		Sama_1321	0.32	+1.2
1,607,934	+		Sama_1321	0.33	+0.2
1,607,934	+		Sama_1321	0.33	-1.4
1,607,935	-		Sama_1321	0.33	+1.7
1,607,935	-		Sama_1321	0.33	+0.8
1,607,964	-		Sama_1321	0.35	+0.3
1,607,968	+		Sama_1321	0.35	-1.8
1,607,968	+		Sama_1321	0.35	-0.4
1,607,968	+		Sama_1321	0.35	-1.0
1,607,968	+		Sama_1321	0.35	-0.7
1,607,968	+		Sama_1321	0.35	+5.4
1,607,968	+		Sama_1321	0.35	-0.7
1,607,969	-		Sama_1321	0.35	-0.2
1,608,041	-		Sama_1321	0.41	+0.6
1,608,041	-		Sama_1321	0.41	-1.0
1,608,102	-		Sama_1321	0.45	-1.3
1,608,124	+		Sama_1321	0.47	-2.4
1,608,124	+		Sama_1321	0.47	+3.0
1,608,125	-		Sama_1321	0.47	-0.3
1,608,125	-		Sama_1321	0.47	-0.0
1,608,199	+		Sama_1321	0.53	+3.1
1,608,200	-		Sama_1321	0.53	-0.2
1,608,222	+		Sama_1321	0.54	+1.8
1,608,223	-		Sama_1321	0.54	-1.2
1,608,244	+		Sama_1321	0.56	-0.2
1,608,359	-		Sama_1321	0.65	+5.3
1,608,387	+		Sama_1321	0.67	+0.5
1,608,388	-		Sama_1321	0.67	-0.2
1,608,388	-		Sama_1321	0.67	-1.5
1,608,388	-		Sama_1321	0.67	+0.5
1,608,388	-		Sama_1321	0.67	+0.6
1,608,388	-		Sama_1321	0.67	-0.3
1,608,388	-		Sama_1321	0.67	+1.5
1,608,388	-		Sama_1321	0.67	+4.5
1,608,388	-		Sama_1321	0.67	-0.3
1,608,388	-		Sama_1321	0.67	+0.3
1,608,389	+		Sama_1321	0.67	-1.2
1,608,389	+		Sama_1321	0.67	-0.4
1,608,389	+		Sama_1321	0.67	+0.8
1,608,390	-		Sama_1321	0.67	+1.7
1,608,390	-		Sama_1321	0.67	-1.0
1,608,392	+		Sama_1321	0.67	+0.5
1,608,393	-		Sama_1321	0.67	-1.2
1,608,393	-		Sama_1321	0.67	+1.1
1,608,393	-		Sama_1321	0.67	-0.1
1,608,516	-		Sama_1321	0.76	+0.1
1,608,516	-		Sama_1321	0.76	-1.2
1,608,516	-		Sama_1321	0.76	+1.3
1,608,617	+		Sama_1321	0.84	+0.8
1,608,617	+		Sama_1321	0.84	+0.8
1,608,617	+		Sama_1321	0.84	+1.4
1,608,618	-		Sama_1321	0.84	-1.2
1,608,618	-		Sama_1321	0.84	+1.0
1,608,618	-		Sama_1321	0.84	+2.9
1,608,624	-		Sama_1321	0.84	+3.5
1,608,650	+		Sama_1321	0.86	+0.5
1,608,650	+		Sama_1321	0.86	+4.4
1,608,650	+		Sama_1321	0.86	-2.2
1,608,650	+		Sama_1321	0.86	+1.7
1,608,650	+		Sama_1321	0.86	-1.1
1,608,650	+		Sama_1321	0.86	+2.6
1,608,651	-		Sama_1321	0.87	-1.9
1,608,651	-		Sama_1321	0.87	+2.5
1,608,651	-		Sama_1321	0.87	-0.5
1,608,778	+				+4.9
1,608,779	-				-0.7
1,608,779	-				+1.2
1,608,788	+				+3.5
1,608,896	+				+1.0
1,608,897	-				-1.8
1,608,966	+				-2.6
1,608,970	+				-0.7
1,608,970	+				-1.3
1,608,970	+				-1.9
1,608,970	+				+0.3
1,608,971	-				-1.3
1,608,971	-				+1.3
1,608,971	-				-1.3
1,608,971	-				+1.4
1,608,971	-				+1.3
1,609,000	-				-0.9
1,609,000	-				+0.8
1,609,003	-				-0.8
1,609,010	-				+2.1
1,609,046	-				-0.6
1,609,053	-				-0.7
1,609,076	+				-1.2
1,609,076	+				+1.2
1,609,076	+				-0.8
1,609,115	+				-1.3
1,609,115	+				-0.8
1,609,117	+				-1.3
1,609,117	+				-4.0
1,609,117	+				+0.9
1,609,117	+				+0.5
1,609,117	+				-0.9
1,609,117	+				+1.5
1,609,117	+				-1.4
1,609,117	+				-0.9
1,609,117	+				-0.8
1,609,117	+				+2.8
1,609,117	+				-0.2
1,609,117	+				-0.2
1,609,117	+				+1.1
1,609,117	+				-1.2
1,609,117	+				-0.1
1,609,117	+				-1.7
1,609,117	+				+0.0
1,609,117	+				-1.5
1,609,117	+				-0.7
1,609,117	+				+1.9
1,609,117	+				-0.7
1,609,117	+				-1.9
1,609,117	+				-1.2
1,609,117	+				+3.6
1,609,117	+				-2.6
1,609,117	+				-2.7
1,609,117	+				+3.6
1,609,117	+				-2.4
1,609,119	+				+3.5
1,609,119	+				-0.8
1,609,119	+				+1.6
1,609,119	+				+5.2