Strain Fitness in Shewanella amazonensis SB2B around Sama_1007

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
1,218,280	+		Sama_1006	0.34	-1.6
1,218,281	-		Sama_1006	0.34	+0.3
1,218,307	+		Sama_1006	0.36	+1.2
1,218,308	-		Sama_1006	0.36	-0.7
1,218,336	+		Sama_1006	0.38	-1.7
1,218,337	-		Sama_1006	0.38	-1.5
1,218,337	-		Sama_1006	0.38	-1.8
1,218,347	+		Sama_1006	0.38	-1.6
1,218,348	-		Sama_1006	0.38	-0.8
1,218,412	+		Sama_1006	0.43	-0.6
1,218,412	+		Sama_1006	0.43	-0.8
1,218,412	+		Sama_1006	0.43	-1.6
1,218,413	-		Sama_1006	0.43	+2.5
1,218,413	-		Sama_1006	0.43	-1.0
1,218,413	-		Sama_1006	0.43	+0.5
1,218,413	-		Sama_1006	0.43	-0.6
1,218,413	-		Sama_1006	0.43	-0.1
1,218,413	-		Sama_1006	0.43	+0.1
1,218,436	+		Sama_1006	0.44	+1.0
1,218,436	+		Sama_1006	0.44	+0.9
1,218,436	+		Sama_1006	0.44	+0.6
1,218,436	+		Sama_1006	0.44	-2.1
1,218,436	+		Sama_1006	0.44	-0.6
1,218,436	+		Sama_1006	0.44	-1.4
1,218,437	-		Sama_1006	0.44	-1.8
1,218,437	-		Sama_1006	0.44	-2.4
1,218,437	-		Sama_1006	0.44	-1.1
1,218,437	-		Sama_1006	0.44	-1.0
1,218,437	-		Sama_1006	0.44	-1.8
1,218,449	+		Sama_1006	0.45	-2.3
1,218,523	+		Sama_1006	0.50	-2.2
1,218,533	+		Sama_1006	0.51	-0.1
1,218,534	-		Sama_1006	0.51	-0.7
1,218,542	+		Sama_1006	0.52	-0.9
1,218,542	+		Sama_1006	0.52	+0.7
1,218,542	+		Sama_1006	0.52	+0.9
1,218,542	+		Sama_1006	0.52	-1.4
1,218,543	-		Sama_1006	0.52	-1.4
1,218,543	-		Sama_1006	0.52	-0.4
1,218,543	-		Sama_1006	0.52	+0.9
1,218,595	+		Sama_1006	0.55	-2.1
1,218,628	-		Sama_1006	0.57	+1.3
1,218,659	+		Sama_1006	0.59	-0.4
1,218,659	+		Sama_1006	0.59	+1.8
1,218,741	+		Sama_1006	0.65	-0.5
1,218,741	+		Sama_1006	0.65	+0.4
1,218,741	+		Sama_1006	0.65	+2.4
1,218,741	+		Sama_1006	0.65	-1.6
1,218,741	+		Sama_1006	0.65	+0.1
1,218,741	+		Sama_1006	0.65	-1.1
1,218,741	+		Sama_1006	0.65	+0.7
1,218,741	+		Sama_1006	0.65	-0.4
1,218,742	-		Sama_1006	0.65	+1.2
1,218,742	-		Sama_1006	0.65	+2.1
1,218,742	-		Sama_1006	0.65	-1.8
1,218,742	-		Sama_1006	0.65	+0.4
1,218,745	+		Sama_1006	0.65	-0.1
1,218,745	+		Sama_1006	0.65	-1.6
1,218,745	+		Sama_1006	0.65	-1.5
1,218,745	+		Sama_1006	0.65	+2.7
1,218,745	+		Sama_1006	0.65	-0.8
1,218,745	+		Sama_1006	0.65	+2.2
1,218,745	+		Sama_1006	0.65	-0.4
1,218,745	+		Sama_1006	0.65	+1.3
1,218,745	+		Sama_1006	0.65	+0.9
1,218,745	+		Sama_1006	0.65	-0.6
1,218,745	+		Sama_1006	0.65	-0.8
1,218,745	+		Sama_1006	0.65	+0.0
1,218,745	+		Sama_1006	0.65	-0.9
1,218,745	+		Sama_1006	0.65	-1.0
1,218,745	+		Sama_1006	0.65	+1.0
1,218,745	+		Sama_1006	0.65	-1.1
1,218,745	+		Sama_1006	0.65	+0.6
1,218,745	+		Sama_1006	0.65	-1.2
1,218,745	+		Sama_1006	0.65	-0.8
1,218,745	+		Sama_1006	0.65	+0.1
1,218,746	-		Sama_1006	0.65	-1.0
1,218,746	-		Sama_1006	0.65	-1.2
1,218,746	-		Sama_1006	0.65	+0.6
1,218,746	-		Sama_1006	0.65	+1.5
1,218,746	-		Sama_1006	0.65	-0.1
1,218,748	+		Sama_1006	0.65	-0.8
1,218,748	+		Sama_1006	0.65	-0.8
1,218,748	+		Sama_1006	0.65	+1.3
1,218,749	-		Sama_1006	0.65	+0.6
1,218,778	+		Sama_1006	0.67	-0.1
1,218,807	+		Sama_1006	0.69	-1.6
1,218,871	+		Sama_1006	0.74	-3.3
1,218,871	+		Sama_1006	0.74	+2.9
1,218,871	+		Sama_1006	0.74	+0.6
1,218,907	+		Sama_1006	0.76	+1.4
1,218,980	+		Sama_1006	0.81	+0.3
1,218,980	+		Sama_1006	0.81	-0.9
1,219,063	+		Sama_1006	0.87	+0.6
1,219,063	+		Sama_1006	0.87	+0.7
1,219,063	+		Sama_1006	0.87	-0.8
1,219,063	+		Sama_1006	0.87	-0.2
1,219,063	+		Sama_1006	0.87	+0.8
1,219,064	-		Sama_1006	0.87	+0.2
1,219,064	-		Sama_1006	0.87	+0.8
1,219,066	+		Sama_1006	0.87	-1.2
1,219,066	+		Sama_1006	0.87	-2.1
1,219,066	+		Sama_1006	0.87	+0.1
1,219,067	-		Sama_1006	0.87	-0.7
1,219,174	+				+2.4
1,219,188	-				-1.8
1,219,188	-				-1.5
1,219,264	-				-2.2
1,219,275	-				+2.0
1,219,344	+		Sama_1007	0.19	-1.4
1,219,345	-		Sama_1007	0.20	+4.8
1,219,345	-		Sama_1007	0.20	+3.1
1,219,408	-		Sama_1007	0.35	-2.3
1,219,436	-		Sama_1007	0.41	-1.3
1,219,436	-		Sama_1007	0.41	+0.6
1,219,548	-		Sama_1007	0.68	+1.7
1,219,551	-		Sama_1007	0.68	-1.9
1,219,575	+		Sama_1007	0.74	-1.6
1,219,575	+		Sama_1007	0.74	+1.4
1,219,576	-		Sama_1007	0.74	-1.1
1,219,576	-		Sama_1007	0.74	-0.4
1,219,576	-		Sama_1007	0.74	-2.5
1,219,576	-		Sama_1007	0.74	-0.3
1,219,645	-				+0.4
1,219,719	-				+0.1
1,219,783	-				-1.0
1,219,783	-				-0.3
1,219,798	+		Sama_1008	0.11	-0.6
1,219,798	+		Sama_1008	0.11	-0.1
1,219,799	-		Sama_1008	0.11	-1.7
1,219,852	+		Sama_1008	0.18	-0.9
1,219,852	+		Sama_1008	0.18	+1.5
1,219,853	-		Sama_1008	0.18	-2.3
1,219,853	-		Sama_1008	0.18	+0.1
1,219,853	-		Sama_1008	0.18	-2.2
1,219,853	-		Sama_1008	0.18	-1.6
1,219,853	-		Sama_1008	0.18	-0.1
1,219,930	+		Sama_1008	0.28	-0.7
1,219,930	+		Sama_1008	0.28	-2.3
1,219,931	-		Sama_1008	0.28	-2.4
1,219,931	-		Sama_1008	0.28	+0.1
1,219,931	-		Sama_1008	0.28	-0.4
1,219,931	-		Sama_1008	0.28	-1.7
1,219,931	-		Sama_1008	0.28	-1.5
1,219,931	-		Sama_1008	0.28	-0.1
1,219,931	-		Sama_1008	0.28	-1.4
1,219,931	-		Sama_1008	0.28	-1.6
1,219,932	+		Sama_1008	0.28	-1.6
1,219,933	-		Sama_1008	0.28	+1.2
1,219,933	-		Sama_1008	0.28	-0.9
1,219,933	-		Sama_1008	0.28	+7.3
1,219,933	-		Sama_1008	0.28	+0.9
1,219,933	-		Sama_1008	0.28	-0.8
1,219,959	+		Sama_1008	0.32	+0.9
1,219,959	+		Sama_1008	0.32	+0.5
1,219,959	+		Sama_1008	0.32	+0.8
1,219,959	+		Sama_1008	0.32	-1.1
1,219,959	+		Sama_1008	0.32	-0.7
1,219,959	+		Sama_1008	0.32	-0.9
1,219,959	+		Sama_1008	0.32	+0.1
1,219,959	+		Sama_1008	0.32	+0.4
1,219,959	+		Sama_1008	0.32	-0.8
1,219,959	+		Sama_1008	0.32	-1.9
1,219,959	+		Sama_1008	0.32	-1.5
1,219,960	-		Sama_1008	0.32	+1.2
1,219,960	-		Sama_1008	0.32	-0.7
1,219,960	-		Sama_1008	0.32	-1.1
1,220,000	-		Sama_1008	0.37	+0.6
1,220,010	+		Sama_1008	0.38	-0.9
1,220,010	+		Sama_1008	0.38	-1.4
1,220,011	-		Sama_1008	0.38	-0.4
1,220,011	-		Sama_1008	0.38	+3.6
1,220,068	-		Sama_1008	0.46	-2.4
1,220,068	-		Sama_1008	0.46	-0.7
1,220,084	+		Sama_1008	0.48	-0.3
1,220,084	+		Sama_1008	0.48	+0.6
1,220,084	+		Sama_1008	0.48	+1.1
1,220,084	+		Sama_1008	0.48	-1.8
1,220,085	-		Sama_1008	0.48	-1.8
1,220,085	-		Sama_1008	0.48	+0.3
1,220,085	-		Sama_1008	0.48	-1.1
1,220,147	+		Sama_1008	0.56	-1.4
1,220,148	-		Sama_1008	0.56	-0.2
1,220,154	+		Sama_1008	0.57	-0.4
1,220,283	+		Sama_1008	0.73	+1.8
1,220,284	-		Sama_1008	0.73	-0.8
1,220,307	+		Sama_1008	0.76	-1.5
1,220,307	+		Sama_1008	0.76	-2.1
1,220,307	+		Sama_1008	0.76	-1.9
1,220,307	+		Sama_1008	0.76	-1.0
1,220,307	+		Sama_1008	0.76	+1.9
1,220,307	+		Sama_1008	0.76	+0.3
1,220,307	+		Sama_1008	0.76	-1.0
1,220,307	+		Sama_1008	0.76	-0.3
1,220,307	+		Sama_1008	0.76	-1.0
1,220,308	-		Sama_1008	0.76	-2.3
1,220,308	-		Sama_1008	0.76	-0.9
1,220,308	-		Sama_1008	0.76	+3.4
1,220,308	-		Sama_1008	0.76	-2.0
1,220,308	-		Sama_1008	0.76	-1.2
1,220,308	-		Sama_1008	0.76	-0.2
1,220,308	-		Sama_1008	0.76	-1.1
1,220,308	-		Sama_1008	0.76	-0.3
1,220,308	-		Sama_1008	0.76	-0.9
1,220,308	-		Sama_1008	0.76	-1.9
1,220,308	-		Sama_1008	0.76	-1.3
1,220,308	-		Sama_1008	0.76	+0.2
1,220,308	-		Sama_1008	0.76	+5.8
1,220,308	-		Sama_1008	0.76	-2.6
1,220,308	-		Sama_1008	0.76	-0.2
1,220,308	-		Sama_1008	0.76	+2.1
1,220,308	-		Sama_1008	0.76	+0.2
1,220,308	-		Sama_1008	0.76	-1.1
1,220,308	-		Sama_1008	0.76	-1.1
1,220,308	-		Sama_1008	0.76	+1.2
1,220,311	+		Sama_1008	0.77	+0.4
1,220,311	+		Sama_1008	0.77	-1.8
1,220,311	+		Sama_1008	0.77	+3.3
1,220,311	+		Sama_1008	0.77	-1.4
1,220,311	+		Sama_1008	0.77	-1.0
1,220,311	+		Sama_1008	0.77	+0.8
1,220,337	-		Sama_1008	0.80	-2.3
1,220,337	-		Sama_1008	0.80	-2.0
1,220,352	-		Sama_1008	0.82	-1.2
1,220,352	-		Sama_1008	0.82	-2.2
1,220,352	-		Sama_1008	0.82	-1.8
1,220,465	+				-1.3
1,220,465	+				-1.2
1,220,493	-				-1.5
1,220,493	-				-2.4
1,220,533	+				-1.5
1,220,534	-				-0.6
1,220,534	-				+0.1
1,220,534	-				-0.4
1,220,538	+				-1.3
1,220,538	+				-2.9
1,220,539	-				-1.1
1,220,539	-				+1.7
1,220,539	-				-1.6
1,220,539	-				+2.6
1,220,539	-				-0.6
1,220,539	-				-2.5
1,220,539	-				-2.3
1,220,542	+				+0.6
1,220,542	+				+0.8
1,220,542	+				-1.0
1,220,543	-				-1.8
1,220,543	-				-1.7