Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0642 and Sama_0643 are separated by 141 nucleotides Sama_0643 and Sama_0644 are separated by 83 nucleotides
Sama_0642: Sama_0642 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (RefSeq), at 797,333 to 798,097
_0642
Sama_0643: Sama_0643 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 798,239 to 799,675
_0643
Sama_0644: Sama_0644 - magnesium transporter, putative (RefSeq), at 799,759 to 800,724
_0644
Position (kb) 798
799
800 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 797.248 kb on + strand at 797.248 kb on + strand at 797.249 kb on - strand at 797.249 kb on - strand at 797.254 kb on + strand at 797.254 kb on + strand at 797.254 kb on + strand at 797.257 kb on + strand at 797.257 kb on + strand at 797.257 kb on + strand at 797.257 kb on + strand at 797.257 kb on + strand at 797.257 kb on + strand at 797.258 kb on - strand at 797.258 kb on - strand at 797.258 kb on - strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.261 kb on + strand at 797.262 kb on - strand at 797.262 kb on - strand at 797.262 kb on - strand at 797.264 kb on + strand at 797.264 kb on + strand at 797.264 kb on + strand at 797.264 kb on + strand at 797.264 kb on + strand at 797.266 kb on + strand at 797.266 kb on + strand at 797.266 kb on + strand at 797.266 kb on + strand at 797.267 kb on - strand at 797.267 kb on - strand at 797.288 kb on + strand at 797.298 kb on + strand at 797.303 kb on + strand at 797.303 kb on + strand at 797.320 kb on + strand at 797.345 kb on + strand at 797.382 kb on + strand at 797.383 kb on - strand at 797.392 kb on + strand at 797.392 kb on + strand at 797.395 kb on + strand at 797.462 kb on + strand, within Sama_0642 at 797.462 kb on + strand, within Sama_0642 at 797.462 kb on + strand, within Sama_0642 at 797.489 kb on + strand, within Sama_0642 at 797.489 kb on + strand, within Sama_0642 at 797.490 kb on - strand, within Sama_0642 at 797.769 kb on + strand, within Sama_0642 at 797.769 kb on + strand, within Sama_0642 at 797.946 kb on + strand, within Sama_0642 at 797.957 kb on + strand, within Sama_0642 at 797.988 kb on - strand, within Sama_0642 at 798.095 kb on + strand at 798.095 kb on + strand at 798.095 kb on + strand at 798.095 kb on + strand at 798.095 kb on + strand at 798.096 kb on - strand at 798.096 kb on - strand at 798.096 kb on - strand at 798.096 kb on - strand at 798.098 kb on + strand at 798.099 kb on - strand at 798.099 kb on - strand at 798.113 kb on + strand at 798.114 kb on - strand at 798.203 kb on + strand at 798.206 kb on + strand at 798.234 kb on + strand at 798.234 kb on + strand at 798.262 kb on + strand at 798.262 kb on + strand at 798.262 kb on + strand at 798.327 kb on + strand at 798.328 kb on - strand at 798.328 kb on - strand at 798.381 kb on + strand at 798.424 kb on + strand, within Sama_0643 at 798.424 kb on + strand, within Sama_0643 at 798.425 kb on - strand, within Sama_0643 at 798.557 kb on + strand, within Sama_0643 at 798.557 kb on + strand, within Sama_0643 at 798.558 kb on - strand, within Sama_0643 at 798.646 kb on - strand, within Sama_0643 at 798.663 kb on + strand, within Sama_0643 at 798.663 kb on + strand, within Sama_0643 at 798.682 kb on + strand, within Sama_0643 at 798.707 kb on + strand, within Sama_0643 at 798.707 kb on + strand, within Sama_0643 at 798.707 kb on + strand, within Sama_0643 at 798.707 kb on + strand, within Sama_0643 at 798.707 kb on + strand, within Sama_0643 at 798.708 kb on - strand, within Sama_0643 at 798.708 kb on - strand, within Sama_0643 at 798.708 kb on - strand, within Sama_0643 at 798.708 kb on - strand, within Sama_0643 at 798.835 kb on + strand, within Sama_0643 at 798.871 kb on + strand, within Sama_0643 at 798.919 kb on + strand, within Sama_0643 at 798.919 kb on + strand, within Sama_0643 at 798.919 kb on + strand, within Sama_0643 at 798.919 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.929 kb on + strand, within Sama_0643 at 798.930 kb on - strand, within Sama_0643 at 798.930 kb on - strand, within Sama_0643 at 798.930 kb on - strand, within Sama_0643 at 798.930 kb on - strand, within Sama_0643 at 798.930 kb on - strand, within Sama_0643 at 798.997 kb on + strand, within Sama_0643 at 798.997 kb on + strand, within Sama_0643 at 798.998 kb on - strand, within Sama_0643 at 798.998 kb on - strand, within Sama_0643 at 798.998 kb on - strand, within Sama_0643 at 799.143 kb on + strand, within Sama_0643 at 799.144 kb on - strand, within Sama_0643 at 799.144 kb on - strand, within Sama_0643 at 799.181 kb on - strand, within Sama_0643 at 799.181 kb on - strand, within Sama_0643 at 799.181 kb on - strand, within Sama_0643 at 799.363 kb on + strand, within Sama_0643 at 799.375 kb on + strand, within Sama_0643 at 799.375 kb on + strand, within Sama_0643 at 799.375 kb on + strand, within Sama_0643 at 799.376 kb on - strand, within Sama_0643 at 799.376 kb on - strand, within Sama_0643 at 799.376 kb on - strand, within Sama_0643 at 799.379 kb on - strand, within Sama_0643 at 799.431 kb on + strand, within Sama_0643 at 799.431 kb on + strand, within Sama_0643 at 799.431 kb on + strand, within Sama_0643 at 799.431 kb on + strand, within Sama_0643 at 799.431 kb on + strand, within Sama_0643 at 799.432 kb on - strand, within Sama_0643 at 799.432 kb on - strand, within Sama_0643 at 799.432 kb on - strand, within Sama_0643 at 799.432 kb on - strand, within Sama_0643 at 799.432 kb on - strand, within Sama_0643 at 799.495 kb on - strand, within Sama_0643 at 799.495 kb on - strand, within Sama_0643 at 799.495 kb on - strand, within Sama_0643 at 799.534 kb on + strand at 799.534 kb on + strand at 799.534 kb on + strand at 799.534 kb on + strand at 799.534 kb on + strand at 799.535 kb on - strand at 799.561 kb on + strand at 799.578 kb on + strand at 799.578 kb on + strand at 799.578 kb on + strand at 799.578 kb on + strand at 799.578 kb on + strand at 799.578 kb on + strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.579 kb on - strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.582 kb on + strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.583 kb on - strand at 799.645 kb on + strand at 799.645 kb on + strand at 799.646 kb on - strand at 799.646 kb on - strand at 799.650 kb on + strand at 799.650 kb on + strand at 799.650 kb on + strand at 799.651 kb on - strand at 799.705 kb on + strand at 799.705 kb on + strand at 799.705 kb on + strand at 799.705 kb on + strand at 799.705 kb on + strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.706 kb on - strand at 799.799 kb on - strand at 799.916 kb on - strand, within Sama_0644 at 799.916 kb on - strand, within Sama_0644 at 799.916 kb on - strand, within Sama_0644 at 799.940 kb on + strand, within Sama_0644 at 799.953 kb on + strand, within Sama_0644 at 799.953 kb on + strand, within Sama_0644 at 800.085 kb on + strand, within Sama_0644 at 800.085 kb on + strand, within Sama_0644 at 800.086 kb on - strand, within Sama_0644 at 800.118 kb on + strand, within Sama_0644 at 800.119 kb on - strand, within Sama_0644 at 800.144 kb on + strand, within Sama_0644 at 800.144 kb on + strand, within Sama_0644 at 800.262 kb on + strand, within Sama_0644 at 800.263 kb on - strand, within Sama_0644 at 800.284 kb on + strand, within Sama_0644 at 800.284 kb on + strand, within Sama_0644 at 800.284 kb on + strand, within Sama_0644 at 800.285 kb on - strand, within Sama_0644 at 800.308 kb on - strand, within Sama_0644 at 800.308 kb on - strand, within Sama_0644 at 800.308 kb on - strand, within Sama_0644 at 800.308 kb on - strand, within Sama_0644 at 800.344 kb on + strand, within Sama_0644 at 800.344 kb on + strand, within Sama_0644 at 800.344 kb on + strand, within Sama_0644 at 800.344 kb on + strand, within Sama_0644 at 800.344 kb on + strand, within Sama_0644 at 800.345 kb on - strand, within Sama_0644 at 800.357 kb on - strand, within Sama_0644 at 800.410 kb on - strand, within Sama_0644 at 800.424 kb on + strand, within Sama_0644 at 800.424 kb on + strand, within Sama_0644 at 800.424 kb on + strand, within Sama_0644 at 800.467 kb on + strand, within Sama_0644 at 800.468 kb on - strand, within Sama_0644 at 800.468 kb on - strand, within Sama_0644 at 800.468 kb on - strand, within Sama_0644 at 800.603 kb on + strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.604 kb on - strand, within Sama_0644 at 800.622 kb on + strand, within Sama_0644 at 800.622 kb on + strand, within Sama_0644 at 800.623 kb on - strand, within Sama_0644 at 800.623 kb on - strand, within Sama_0644
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 797,248 + +3.0 797,248 + -1.4 797,249 - +2.0 797,249 - -2.4 797,254 + -0.8 797,254 + -0.8 797,254 + -0.8 797,257 + -1.1 797,257 + +1.3 797,257 + -1.9 797,257 + -0.2 797,257 + +0.9 797,257 + +0.2 797,258 - +1.7 797,258 - -0.9 797,258 - -1.6 797,261 + +0.2 797,261 + -0.2 797,261 + +3.1 797,261 + -0.2 797,261 + -1.8 797,261 + -0.8 797,261 + +0.7 797,262 - -0.4 797,262 - -0.4 797,262 - -1.8 797,264 + -3.3 797,264 + -1.9 797,264 + +0.2 797,264 + -2.0 797,264 + -2.7 797,266 + -0.4 797,266 + +1.8 797,266 + -2.8 797,266 + -1.0 797,267 - -0.3 797,267 - +0.3 797,288 + +0.4 797,298 + -1.6 797,303 + +0.2 797,303 + -2.0 797,320 + +1.8 797,345 + -0.1 797,382 + +1.8 797,383 - +3.0 797,392 + -1.2 797,392 + +2.9 797,395 + +0.5 797,462 + Sama_0642 0.17 -1.4 797,462 + Sama_0642 0.17 -0.7 797,462 + Sama_0642 0.17 -1.2 797,489 + Sama_0642 0.20 +3.0 797,489 + Sama_0642 0.20 -2.2 797,490 - Sama_0642 0.21 -1.7 797,769 + Sama_0642 0.57 +0.3 797,769 + Sama_0642 0.57 +0.5 797,946 + Sama_0642 0.80 +3.4 797,957 + Sama_0642 0.82 -0.0 797,988 - Sama_0642 0.86 -1.7 798,095 + +1.9 798,095 + +0.9 798,095 + -0.5 798,095 + -0.5 798,095 + -0.8 798,096 - -2.3 798,096 - -1.9 798,096 - -1.2 798,096 - +0.3 798,098 + -1.8 798,099 - -0.7 798,099 - +1.0 798,113 + -0.8 798,114 - -1.7 798,203 + -0.7 798,206 + +1.0 798,234 + +1.4 798,234 + -1.2 798,262 + -1.3 798,262 + -0.0 798,262 + -2.1 798,327 + -0.5 798,328 - -1.4 798,328 - +1.1 798,381 + +0.5 798,424 + Sama_0643 0.13 +0.4 798,424 + Sama_0643 0.13 +1.4 798,425 - Sama_0643 0.13 -0.3 798,557 + Sama_0643 0.22 +0.8 798,557 + Sama_0643 0.22 -1.5 798,558 - Sama_0643 0.22 +0.4 798,646 - Sama_0643 0.28 -0.1 798,663 + Sama_0643 0.30 +1.8 798,663 + Sama_0643 0.30 -0.1 798,682 + Sama_0643 0.31 -3.0 798,707 + Sama_0643 0.33 +0.4 798,707 + Sama_0643 0.33 +1.0 798,707 + Sama_0643 0.33 +1.6 798,707 + Sama_0643 0.33 +0.3 798,707 + Sama_0643 0.33 -1.6 798,708 - Sama_0643 0.33 -1.3 798,708 - Sama_0643 0.33 +2.0 798,708 - Sama_0643 0.33 -1.2 798,708 - Sama_0643 0.33 -0.6 798,835 + Sama_0643 0.41 -1.1 798,871 + Sama_0643 0.44 -0.7 798,919 + Sama_0643 0.47 +1.4 798,919 + Sama_0643 0.47 -0.4 798,919 + Sama_0643 0.47 +0.5 798,919 + Sama_0643 0.47 -1.1 798,929 + Sama_0643 0.48 -0.6 798,929 + Sama_0643 0.48 -2.6 798,929 + Sama_0643 0.48 -0.0 798,929 + Sama_0643 0.48 -1.6 798,929 + Sama_0643 0.48 -2.6 798,929 + Sama_0643 0.48 -0.3 798,929 + Sama_0643 0.48 +1.4 798,929 + Sama_0643 0.48 +0.9 798,930 - Sama_0643 0.48 +3.7 798,930 - Sama_0643 0.48 -0.4 798,930 - Sama_0643 0.48 +4.5 798,930 - Sama_0643 0.48 -0.4 798,930 - Sama_0643 0.48 +3.2 798,997 + Sama_0643 0.53 -2.9 798,997 + Sama_0643 0.53 -0.2 798,998 - Sama_0643 0.53 -2.4 798,998 - Sama_0643 0.53 +3.8 798,998 - Sama_0643 0.53 +0.8 799,143 + Sama_0643 0.63 -1.7 799,144 - Sama_0643 0.63 -1.8 799,144 - Sama_0643 0.63 -1.2 799,181 - Sama_0643 0.66 -0.4 799,181 - Sama_0643 0.66 +0.7 799,181 - Sama_0643 0.66 +3.9 799,363 + Sama_0643 0.78 -1.0 799,375 + Sama_0643 0.79 +0.5 799,375 + Sama_0643 0.79 -0.6 799,375 + Sama_0643 0.79 +0.0 799,376 - Sama_0643 0.79 -3.0 799,376 - Sama_0643 0.79 -2.0 799,376 - Sama_0643 0.79 +0.4 799,379 - Sama_0643 0.79 -0.0 799,431 + Sama_0643 0.83 -0.6 799,431 + Sama_0643 0.83 -2.5 799,431 + Sama_0643 0.83 +0.7 799,431 + Sama_0643 0.83 -2.1 799,431 + Sama_0643 0.83 -1.1 799,432 - Sama_0643 0.83 -0.4 799,432 - Sama_0643 0.83 -0.0 799,432 - Sama_0643 0.83 -0.2 799,432 - Sama_0643 0.83 -2.7 799,432 - Sama_0643 0.83 -0.4 799,495 - Sama_0643 0.87 +0.5 799,495 - Sama_0643 0.87 +4.7 799,495 - Sama_0643 0.87 -2.0 799,534 + -1.3 799,534 + -1.0 799,534 + -2.2 799,534 + -0.2 799,534 + +1.4 799,535 - -2.0 799,561 + +0.8 799,578 + -1.2 799,578 + -0.9 799,578 + +2.5 799,578 + -0.1 799,578 + -0.1 799,578 + +0.2 799,579 - -2.3 799,579 - +0.0 799,579 - +1.0 799,579 - -0.5 799,579 - +0.7 799,579 - +1.4 799,579 - +0.6 799,579 - -0.6 799,582 + -1.6 799,582 + -1.1 799,582 + -0.2 799,582 + +1.1 799,582 + +2.4 799,582 + -1.4 799,582 + +0.9 799,582 + -0.3 799,582 + -1.2 799,582 + +4.0 799,582 + +1.5 799,582 + -3.1 799,582 + +0.3 799,582 + +0.1 799,583 - -1.2 799,583 - +0.6 799,583 - +1.7 799,583 - -0.5 799,583 - -0.1 799,583 - +0.7 799,583 - -0.6 799,583 - +1.6 799,583 - -0.0 799,645 + +0.2 799,645 + +0.5 799,646 - -3.0 799,646 - -1.4 799,650 + -0.1 799,650 + -2.9 799,650 + +1.2 799,651 - -1.6 799,705 + -0.7 799,705 + -0.5 799,705 + +0.7 799,705 + -0.8 799,705 + -3.5 799,706 - -0.2 799,706 - -1.8 799,706 - +2.4 799,706 - +1.0 799,706 - -0.9 799,706 - -2.5 799,706 - -0.7 799,799 - -0.9 799,916 - Sama_0644 0.16 -2.9 799,916 - Sama_0644 0.16 +0.8 799,916 - Sama_0644 0.16 +1.2 799,940 + Sama_0644 0.19 +1.4 799,953 + Sama_0644 0.20 +0.1 799,953 + Sama_0644 0.20 -1.8 800,085 + Sama_0644 0.34 -0.4 800,085 + Sama_0644 0.34 -0.4 800,086 - Sama_0644 0.34 +0.1 800,118 + Sama_0644 0.37 -0.4 800,119 - Sama_0644 0.37 +0.4 800,144 + Sama_0644 0.40 +1.3 800,144 + Sama_0644 0.40 -0.8 800,262 + Sama_0644 0.52 -1.6 800,263 - Sama_0644 0.52 +0.6 800,284 + Sama_0644 0.54 +1.3 800,284 + Sama_0644 0.54 -2.5 800,284 + Sama_0644 0.54 -0.8 800,285 - Sama_0644 0.54 -1.4 800,308 - Sama_0644 0.57 +1.1 800,308 - Sama_0644 0.57 -2.3 800,308 - Sama_0644 0.57 -0.8 800,308 - Sama_0644 0.57 +0.7 800,344 + Sama_0644 0.61 -0.3 800,344 + Sama_0644 0.61 +0.6 800,344 + Sama_0644 0.61 -1.3 800,344 + Sama_0644 0.61 +0.4 800,344 + Sama_0644 0.61 -0.3 800,345 - Sama_0644 0.61 +0.2 800,357 - Sama_0644 0.62 +2.8 800,410 - Sama_0644 0.67 -0.2 800,424 + Sama_0644 0.69 -1.4 800,424 + Sama_0644 0.69 -0.5 800,424 + Sama_0644 0.69 +0.4 800,467 + Sama_0644 0.73 -1.6 800,468 - Sama_0644 0.73 +0.7 800,468 - Sama_0644 0.73 +0.5 800,468 - Sama_0644 0.73 -0.6 800,603 + Sama_0644 0.87 +3.3 800,604 - Sama_0644 0.87 -1.6 800,604 - Sama_0644 0.87 +0.3 800,604 - Sama_0644 0.87 -1.2 800,604 - Sama_0644 0.87 -0.3 800,604 - Sama_0644 0.87 -0.6 800,604 - Sama_0644 0.87 -0.0 800,604 - Sama_0644 0.87 -1.7 800,622 + Sama_0644 0.89 -0.1 800,622 + Sama_0644 0.89 +4.1 800,623 - Sama_0644 0.89 -1.2 800,623 - Sama_0644 0.89 -0.0
Or see this region's nucleotide sequence