Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30680

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,201,652	+				+0.7
3,201,662	-				-0.7
3,201,684	-				-1.7
3,201,723	+				-2.0
3,201,764	+		PGA1_c30670	0.12	-0.8
3,201,764	+		PGA1_c30670	0.12	+0.7
3,201,772	-		PGA1_c30670	0.13	-0.6
3,201,772	-		PGA1_c30670	0.13	+1.3
3,201,772	-		PGA1_c30670	0.13	+1.8
3,201,772	-		PGA1_c30670	0.13	+1.3
3,201,808	-		PGA1_c30670	0.20	+0.1
3,201,858	-		PGA1_c30670	0.28	+0.3
3,201,886	+		PGA1_c30670	0.33	+1.7
3,201,887	+		PGA1_c30670	0.33	-0.7
3,201,888	+		PGA1_c30670	0.33	+2.8
3,202,006	-		PGA1_c30670	0.53	+0.7
3,202,055	+		PGA1_c30670	0.62	-1.7
3,202,056	-		PGA1_c30670	0.62	+1.3
3,202,423	-				+0.9
3,202,463	+				-2.4
3,202,494	+				-1.9
3,202,531	-				+0.3
3,202,531	-				+0.5
3,202,533	+				+0.2
3,202,533	+				-2.1
3,202,533	+				+0.4
3,202,533	+				-0.5
3,202,541	-				-2.2
3,202,541	-				-0.5
3,202,541	-				-1.5
3,202,541	-				+2.8
3,202,654	+				+0.8
3,202,662	-				+0.8
3,202,696	-				-0.6
3,202,698	-				+0.6
3,202,713	+				+1.0
3,202,717	+				-0.0
3,202,718	+				-0.1
3,202,726	-		PGA1_c30680	0.10	-1.3
3,202,762	+		PGA1_c30680	0.15	-0.5
3,202,780	-		PGA1_c30680	0.18	+0.6
3,202,780	-		PGA1_c30680	0.18	-1.5
3,202,780	-		PGA1_c30680	0.18	+0.4
3,202,819	+		PGA1_c30680	0.23	+1.5
3,202,831	+		PGA1_c30680	0.24	-1.1
3,202,844	+		PGA1_c30680	0.26	-0.7
3,202,844	+		PGA1_c30680	0.26	-1.6
3,202,844	+		PGA1_c30680	0.26	-0.1
3,202,852	-		PGA1_c30680	0.27	+0.4
3,202,852	-		PGA1_c30680	0.27	+0.0
3,202,873	+		PGA1_c30680	0.30	-0.7
3,202,878	+		PGA1_c30680	0.31	-1.0
3,202,878	+		PGA1_c30680	0.31	-2.1
3,202,878	+		PGA1_c30680	0.31	-1.3
3,202,881	-		PGA1_c30680	0.31	-0.3
3,202,886	-		PGA1_c30680	0.32	-2.1
3,202,898	-		PGA1_c30680	0.33	+1.2
3,202,902	+		PGA1_c30680	0.34	-0.6
3,202,902	+		PGA1_c30680	0.34	+0.1
3,202,902	+		PGA1_c30680	0.34	+2.0
3,202,902	+		PGA1_c30680	0.34	+0.5
3,202,902	-		PGA1_c30680	0.34	-0.1
3,202,950	+		PGA1_c30680	0.40	-0.8
3,202,950	+		PGA1_c30680	0.40	-0.7
3,202,950	+		PGA1_c30680	0.40	+0.3
3,202,950	+		PGA1_c30680	0.40	-0.9
3,202,950	+		PGA1_c30680	0.40	-0.1
3,202,958	-		PGA1_c30680	0.41	-0.1
3,202,958	-		PGA1_c30680	0.41	-0.5
3,202,958	-		PGA1_c30680	0.41	-0.9
3,202,958	-		PGA1_c30680	0.41	+0.4
3,202,958	-		PGA1_c30680	0.41	+0.2
3,202,958	-		PGA1_c30680	0.41	-0.9
3,203,000	-		PGA1_c30680	0.47	-1.1
3,203,001	+		PGA1_c30680	0.47	+0.2
3,203,004	-		PGA1_c30680	0.47	-1.3
3,203,004	-		PGA1_c30680	0.47	-0.4
3,203,004	-		PGA1_c30680	0.47	+0.6
3,203,004	-		PGA1_c30680	0.47	+1.0
3,203,009	-		PGA1_c30680	0.48	+0.2
3,203,009	-		PGA1_c30680	0.48	+0.7
3,203,054	+		PGA1_c30680	0.54	+0.2
3,203,062	-		PGA1_c30680	0.55	-0.6
3,203,121	+		PGA1_c30680	0.63	-1.7
3,203,121	+		PGA1_c30680	0.63	-1.4
3,203,123	+		PGA1_c30680	0.63	-0.9
3,203,123	+		PGA1_c30680	0.63	-0.9
3,203,123	+		PGA1_c30680	0.63	+1.3
3,203,123	+		PGA1_c30680	0.63	-0.0
3,203,123	+		PGA1_c30680	0.63	-0.3
3,203,123	+		PGA1_c30680	0.63	-1.3
3,203,129	-		PGA1_c30680	0.64	+0.3
3,203,129	-		PGA1_c30680	0.64	-0.7
3,203,129	-		PGA1_c30680	0.64	+0.0
3,203,129	-		PGA1_c30680	0.64	-0.2
3,203,131	-		PGA1_c30680	0.64	-0.7
3,203,131	-		PGA1_c30680	0.64	+1.1
3,203,131	-		PGA1_c30680	0.64	+0.1
3,203,131	-		PGA1_c30680	0.64	-0.4
3,203,131	-		PGA1_c30680	0.64	-1.2
3,203,176	+		PGA1_c30680	0.70	-1.1
3,203,200	+		PGA1_c30680	0.73	+1.3
3,203,200	+		PGA1_c30680	0.73	-0.7
3,203,200	+		PGA1_c30680	0.73	-2.1
3,203,208	-		PGA1_c30680	0.75	-0.6
3,203,232	-		PGA1_c30680	0.78	-0.9
3,203,262	+		PGA1_c30680	0.82	-1.6
3,203,270	-		PGA1_c30680	0.83	-1.3
3,203,279	-		PGA1_c30680	0.84	-1.0
3,203,307	+		PGA1_c30680	0.88	+0.4
3,203,328	-				-1.2
3,203,367	+				+0.6
3,203,376	-				-0.6
3,203,383	+				-0.8
3,203,384	-				+1.3
3,203,385	-				-0.6
3,203,408	+				+0.4
3,203,408	+				+0.4
3,203,416	-				-0.3
3,203,416	-				-0.7
3,203,426	+				+0.1
3,203,427	+				-0.5
3,203,435	-				-0.0
3,203,449	+				-0.1
3,203,452	-				-0.3
3,203,457	-				+0.4
3,203,457	-				-2.0
3,203,469	-				-0.3
3,203,476	+				+0.0
3,203,476	+				+0.1
3,203,484	+				-0.4
3,203,492	-				-0.0
3,203,492	-				+0.8
3,203,548	+				-1.6
3,203,548	+				+1.7
3,203,548	+				-0.0
3,203,548	+				-1.0
3,203,548	+				+0.8
3,203,552	-				+1.1
3,203,556	-				-0.0
3,203,556	-				-0.1
3,203,556	-				-0.3
3,203,556	-				+1.3
3,203,556	-				-0.3
3,203,556	-				-0.4
3,203,556	-				+0.2
3,203,556	-				-1.2
3,203,556	-				-0.6
3,203,556	-				+0.1
3,203,577	+				-1.7
3,203,593	-				-0.9
3,203,609	+				-0.0
3,203,609	+				-0.5
3,203,617	-				+1.7
3,203,622	-				-0.9
3,203,624	+				-2.3
3,203,624	+				-0.8
3,203,632	-				+0.6
3,203,639	-				-1.7
3,203,639	-				+1.4
3,203,641	-				-1.3
3,203,654	+				-0.7
3,203,662	-				+0.6
3,203,662	-				+0.6
3,203,672	-				+0.0
3,203,685	+				+0.0
3,203,685	+				+1.3
3,203,685	+				-0.7
3,203,685	+				+1.1
3,203,685	+				+0.7
3,203,685	+				+0.2
3,203,693	-				-0.9
3,203,693	-				+0.9
3,203,693	-				+0.4
3,203,693	-				-1.7
3,203,706	-				-0.6
3,203,747	-		PGA1_c30690	0.11	+0.3
3,203,751	+		PGA1_c30690	0.11	-2.6
3,203,751	+		PGA1_c30690	0.11	+0.9
3,203,751	+		PGA1_c30690	0.11	-0.8
3,203,759	-		PGA1_c30690	0.11	+1.0
3,203,759	-		PGA1_c30690	0.11	-0.2
3,203,759	-		PGA1_c30690	0.11	-0.3
3,203,806	+		PGA1_c30690	0.12	-0.2
3,203,814	-		PGA1_c30690	0.13	+0.5
3,203,814	-		PGA1_c30690	0.13	-1.6
3,203,815	-		PGA1_c30690	0.13	-0.8
3,203,857	+		PGA1_c30690	0.14	+2.3
3,203,868	+		PGA1_c30690	0.14	+0.1
3,203,868	+		PGA1_c30690	0.14	-1.9
3,203,868	+		PGA1_c30690	0.14	-1.3
3,203,868	+		PGA1_c30690	0.14	+2.0
3,203,876	-		PGA1_c30690	0.15	-0.7
3,203,887	+		PGA1_c30690	0.15	-1.5
3,203,897	+		PGA1_c30690	0.15	+1.0
3,203,919	+		PGA1_c30690	0.16	-1.1
3,203,919	+		PGA1_c30690	0.16	-0.2
3,203,919	+		PGA1_c30690	0.16	-0.2
3,203,927	-		PGA1_c30690	0.16	-0.3
3,203,927	-		PGA1_c30690	0.16	+0.6
3,203,927	-		PGA1_c30690	0.16	-1.7
3,203,927	-		PGA1_c30690	0.16	-0.1
3,203,934	+		PGA1_c30690	0.16	+0.9
3,203,942	-		PGA1_c30690	0.17	-1.2
3,204,043	+		PGA1_c30690	0.20	-0.9
3,204,051	-		PGA1_c30690	0.20	+0.1
3,204,055	+		PGA1_c30690	0.20	+0.3
3,204,055	+		PGA1_c30690	0.20	+1.6
3,204,063	-		PGA1_c30690	0.20	+1.3
3,204,071	-		PGA1_c30690	0.21	-2.6
3,204,079	+		PGA1_c30690	0.21	+0.2
3,204,122	+		PGA1_c30690	0.22	-0.2
3,204,146	+		PGA1_c30690	0.23	-0.1
3,204,147	+		PGA1_c30690	0.23	-0.7
3,204,196	+		PGA1_c30690	0.24	+2.3
3,204,197	-		PGA1_c30690	0.24	-0.5
3,204,201	+		PGA1_c30690	0.25	-0.3
3,204,204	-		PGA1_c30690	0.25	-1.2
3,204,208	+		PGA1_c30690	0.25	+0.7
3,204,208	+		PGA1_c30690	0.25	-2.0
3,204,208	+		PGA1_c30690	0.25	-2.1
3,204,213	+		PGA1_c30690	0.25	+0.0
3,204,213	+		PGA1_c30690	0.25	-2.1
3,204,213	+		PGA1_c30690	0.25	-0.3
3,204,213	+		PGA1_c30690	0.25	+0.8
3,204,213	+		PGA1_c30690	0.25	-0.1
3,204,220	+		PGA1_c30690	0.25	+0.1
3,204,221	-		PGA1_c30690	0.25	+0.0
3,204,221	-		PGA1_c30690	0.25	+0.2
3,204,221	-		PGA1_c30690	0.25	+0.2
3,204,221	-		PGA1_c30690	0.25	-0.2
3,204,268	+		PGA1_c30690	0.27	-1.8
3,204,268	+		PGA1_c30690	0.27	+0.8
3,204,300	+		PGA1_c30690	0.28	-0.6
3,204,342	+		PGA1_c30690	0.29	-0.9
3,204,342	+		PGA1_c30690	0.29	+0.0
3,204,345	-		PGA1_c30690	0.29	-0.4
3,204,347	+		PGA1_c30690	0.29	-0.2
3,204,350	-		PGA1_c30690	0.29	-0.1
3,204,355	-		PGA1_c30690	0.29	-0.9
3,204,355	-		PGA1_c30690	0.29	-0.6
3,204,355	-		PGA1_c30690	0.29	-0.1
3,204,355	-		PGA1_c30690	0.29	+0.6
3,204,355	-		PGA1_c30690	0.29	-1.2
3,204,357	+		PGA1_c30690	0.29	-1.4
3,204,357	+		PGA1_c30690	0.29	+0.3
3,204,357	+		PGA1_c30690	0.29	-1.7
3,204,357	+		PGA1_c30690	0.29	-0.7
3,204,357	+		PGA1_c30690	0.29	+0.0
3,204,365	-		PGA1_c30690	0.30	-0.9
3,204,378	-		PGA1_c30690	0.30	-0.6
3,204,393	+		PGA1_c30690	0.30	+0.5